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5871 Publications
2021 | Draft | Preprint | IST-REx-ID: 10316 |

Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14
K. Tomasek, A.F. Leithner, I. Glatzová, M.S. Lukesch, C.C. Guet, M.K. Sixt, BioRxiv (n.d.).
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K. Tomasek, A.F. Leithner, I. Glatzová, M.S. Lukesch, C.C. Guet, M.K. Sixt, BioRxiv (n.d.).
2021 | Published | Thesis | IST-REx-ID: 9623 |

Fertilization-induced deformations are controlled by the actin cortex and a mitochondria-rich subcortical layer in ascidian oocytes
S. Caballero Mancebo, Fertilization-Induced Deformations Are Controlled by the Actin Cortex and a Mitochondria-Rich Subcortical Layer in Ascidian Oocytes, Institute of Science and Technology Austria, 2021.
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S. Caballero Mancebo, Fertilization-Induced Deformations Are Controlled by the Actin Cortex and a Mitochondria-Rich Subcortical Layer in Ascidian Oocytes, Institute of Science and Technology Austria, 2021.
2021 | Published | Journal Article | IST-REx-ID: 9006 |

Cytoplasm's got moves
Shamipour, Shayan, Cytoplasm's got moves. Developmental Cell 56 (2). 2021
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Shamipour, Shayan, Cytoplasm's got moves. Developmental Cell 56 (2). 2021
2021 | Published | Journal Article | IST-REx-ID: 9010 |

Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport
K. Ötvös, M. Marconi, A. Vega, J. O’Brien, A.J. Johnson, R. Abualia, L. Antonielli, J.C. Montesinos López, Y. Zhang, S. Tan, C. Cuesta, C. Artner, E. Bouguyon, A. Gojon, J. Friml, R.A. Gutiérrez, K.T. Wabnik, E. Benková, EMBO Journal 40 (2021).
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K. Ötvös, M. Marconi, A. Vega, J. O’Brien, A.J. Johnson, R. Abualia, L. Antonielli, J.C. Montesinos López, Y. Zhang, S. Tan, C. Cuesta, C. Artner, E. Bouguyon, A. Gojon, J. Friml, R.A. Gutiérrez, K.T. Wabnik, E. Benková, EMBO Journal 40 (2021).
2021 | Published | Journal Article | IST-REx-ID: 9913 |

Nitrate triggered phosphoproteome changes and a PIN2 phosphosite modulating root system architecture
A. Vega, I. Fredes, J. O’Brien, Z. Shen, K. Ötvös, R. Abualia, E. Benková, S.P. Briggs, R.A. Gutiérrez, EMBO Reports 22 (2021).
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A. Vega, I. Fredes, J. O’Brien, Z. Shen, K. Ötvös, R. Abualia, E. Benková, S.P. Briggs, R.A. Gutiérrez, EMBO Reports 22 (2021).
2021 | Published | Thesis | IST-REx-ID: 10303 |

Role of hormones in nitrate regulated growth
R. Abualia, Role of Hormones in Nitrate Regulated Growth, Institute of Science and Technology Austria, 2021.
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R. Abualia, Role of Hormones in Nitrate Regulated Growth, Institute of Science and Technology Austria, 2021.
2021 | Published | Journal Article | IST-REx-ID: 9438 |

Subcellular patch-clamp techniques for single-bouton stimulation and simultaneous pre- and postsynaptic recording at cortical synapses
D.H. Vandael, Y. Okamoto, C. Borges Merjane, V.M. Vargas Barroso, B. Suter, P.M. Jonas, Nature Protocols 16 (2021) 2947–2967.
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D.H. Vandael, Y. Okamoto, C. Borges Merjane, V.M. Vargas Barroso, B. Suter, P.M. Jonas, Nature Protocols 16 (2021) 2947–2967.
2021 | Published | Journal Article | IST-REx-ID: 8602 |

Theory of mechanochemical patterning and optimal migration in cell monolayers
Boocock, Daniel R, Theory of mechanochemical patterning and optimal migration in cell monolayers. Nature Physics 17. 2021
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Boocock, Daniel R, Theory of mechanochemical patterning and optimal migration in cell monolayers. Nature Physics 17. 2021
2021 | Published | Thesis | IST-REx-ID: 9962 |

Cell-autonomous gene function and non-cell-autonomous effects in radial projection neuron migration
A.H. Hansen, Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects in Radial Projection Neuron Migration, Institute of Science and Technology Austria, 2021.
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A.H. Hansen, Cell-Autonomous Gene Function and Non-Cell-Autonomous Effects in Radial Projection Neuron Migration, Institute of Science and Technology Austria, 2021.
2021 | Published | Journal Article | IST-REx-ID: 10220 |

Eliminating higher-multiplicity intersections. III. Codimension 2
S. Avvakumov, I. Mabillard, A.B. Skopenkov, U. Wagner, Israel Journal of Mathematics 245 (2021) 501–534.
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S. Avvakumov, I. Mabillard, A.B. Skopenkov, U. Wagner, Israel Journal of Mathematics 245 (2021) 501–534.
2021 | Published | Journal Article | IST-REx-ID: 10299 |

Experimental observation of the origin and structure of elastoinertial turbulence
G.H. Choueiri, J.M. Lopez Alonso, A. Varshney, S. Sankar, B. Hof, Proceedings of the National Academy of Sciences of the United States of America 118 (2021).
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G.H. Choueiri, J.M. Lopez Alonso, A. Varshney, S. Sankar, B. Hof, Proceedings of the National Academy of Sciences of the United States of America 118 (2021).
2020 | Published | Journal Article | IST-REx-ID: 14125 |

SCIM: Universal single-cell matching with unpaired feature sets
Stark SG et al. 2020. SCIM: Universal single-cell matching with unpaired feature sets. Bioinformatics. 36(Supplement_2), i919–i927.
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Stark SG et al. 2020. SCIM: Universal single-cell matching with unpaired feature sets. Bioinformatics. 36(Supplement_2), i919–i927.
2020 | Published | Conference Paper | IST-REx-ID: 14186 |

A commentary on the unsupervised learning of disentangled representations
F. Locatello, S. Bauer, M. Lucic, G. Rätsch, S. Gelly, B. Schölkopf, O. Bachem, in:, The 34th AAAI Conference on Artificial Intelligence, Association for the Advancement of Artificial Intelligence, 2020, pp. 13681–13684.
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F. Locatello, S. Bauer, M. Lucic, G. Rätsch, S. Gelly, B. Schölkopf, O. Bachem, in:, The 34th AAAI Conference on Artificial Intelligence, Association for the Advancement of Artificial Intelligence, 2020, pp. 13681–13684.
2020 | Published | Conference Paper | IST-REx-ID: 14187 |

Stochastic Frank-Wolfe for constrained finite-sum minimization
G. Négiar, G. Dresdner, A. Tsai, L.E. Ghaoui, F. Locatello, R.M. Freund, F. Pedregosa, in:, Proceedings of the 37th International Conference on Machine Learning, 2020, pp. 7253–7262.
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G. Négiar, G. Dresdner, A. Tsai, L.E. Ghaoui, F. Locatello, R.M. Freund, F. Pedregosa, in:, Proceedings of the 37th International Conference on Machine Learning, 2020, pp. 7253–7262.
2020 | Published | Conference Paper | IST-REx-ID: 14188 |

Weakly-supervised disentanglement without compromises
F. Locatello, B. Poole, G. Rätsch, B. Schölkopf, O. Bachem, M. Tschannen, in:, Proceedings of the 37th International Conference on Machine Learning, 2020, pp. 6348–6359.
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F. Locatello, B. Poole, G. Rätsch, B. Schölkopf, O. Bachem, M. Tschannen, in:, Proceedings of the 37th International Conference on Machine Learning, 2020, pp. 6348–6359.
2020 | Published | Journal Article | IST-REx-ID: 14195 |

A sober look at the unsupervised learning of disentangled representations and their evaluation
F. Locatello, S. Bauer, M. Lucic, G. Rätsch, S. Gelly, B. Schölkopf, O. Bachem, Journal of Machine Learning Research 21 (2020).
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F. Locatello, S. Bauer, M. Lucic, G. Rätsch, S. Gelly, B. Schölkopf, O. Bachem, Journal of Machine Learning Research 21 (2020).
2020 | Published | Journal Article | IST-REx-ID: 10861
AMT 2.0: Qualitative and quantitative trace analysis with extended signal temporal logic
D. Nickovic, O. Lebeltel, O. Maler, T. Ferrere, D. Ulus, International Journal on Software Tools for Technology Transfer 22 (2020) 741–758.
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D. Nickovic, O. Lebeltel, O. Maler, T. Ferrere, D. Ulus, International Journal on Software Tools for Technology Transfer 22 (2020) 741–758.
2020 | Published | Journal Article | IST-REx-ID: 10866 |

Twisted nano-optics: Manipulating light at the nanoscale with twisted phonon polaritonic slabs
J. Duan, N. Capote-Robayna, J. Taboada-Gutiérrez, G. Álvarez-Pérez, I. Prieto Gonzalez, J. Martín-Sánchez, A.Y. Nikitin, P. Alonso-González, Nano Letters 20 (2020) 5323–5329.
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J. Duan, N. Capote-Robayna, J. Taboada-Gutiérrez, G. Álvarez-Pérez, I. Prieto Gonzalez, J. Martín-Sánchez, A.Y. Nikitin, P. Alonso-González, Nano Letters 20 (2020) 5323–5329.
2020 | Published | Journal Article | IST-REx-ID: 10867 |

Waist of balls in hyperbolic and spherical spaces
A. Akopyan, R. Karasev, International Mathematics Research Notices 2020 (2020) 669–697.
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A. Akopyan, R. Karasev, International Mathematics Research Notices 2020 (2020) 669–697.
2020 | Published | Journal Article | IST-REx-ID: 177 |

A geometric version of the circle method
T.D. Browning, W. Sawin, Annals of Mathematics 191 (2020) 893–948.
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T.D. Browning, W. Sawin, Annals of Mathematics 191 (2020) 893–948.