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6242 Publications
2025 | Published | Journal Article | IST-REx-ID: 20101 | 
The neural basis of species-specific defensive behaviour in Peromyscus mice
F. Baier, K. Reinhard, B. Nuttin, A. Sans-Dublanc, C. Liu, V. Tong, J.S. Murmann, K. Wierda, K. Farrow, H.E. Hoekstra, Nature 645 (2025) 439–447.
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F. Baier, K. Reinhard, B. Nuttin, A. Sans-Dublanc, C. Liu, V. Tong, J.S. Murmann, K. Wierda, K. Farrow, H.E. Hoekstra, Nature 645 (2025) 439–447.
2025 | Published | Journal Article | IST-REx-ID: 20867 |
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Coarse and bi-Lipschitz embeddability of subspaces of the Gromov–Hausdorff space into Hilbert spaces
N. Zava, Algebraic & Geometric Topology 25 (2025) 5153–5174.
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N. Zava, Algebraic & Geometric Topology 25 (2025) 5153–5174.
2025 | Published | Journal Article | IST-REx-ID: 20926 |
A universal augmentation framework for long-range electrostatics in machine learning interatomic potentials
D. Kim, X. Wang, S. Vargas, P. Zhong, D.S. King, T.J. Inizan, B. Cheng, Journal of Chemical Theory and Computation 21 (2025) 12709–12724.
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D. Kim, X. Wang, S. Vargas, P. Zhong, D.S. King, T.J. Inizan, B. Cheng, Journal of Chemical Theory and Computation 21 (2025) 12709–12724.
2025 | Published | Journal Article | IST-REx-ID: 20869
Reduced fitness under drought stress in F1 hybrids of Antirrhinum majus varieties with divergent flower colors
A. Fuster‐Calvo, C.C. Jaworski, T. Ellis, C. Baskett, American Journal of Botany 112 (2025).
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A. Fuster‐Calvo, C.C. Jaworski, T. Ellis, C. Baskett, American Journal of Botany 112 (2025).
2025 | Published | Book Chapter | IST-REx-ID: 20870
Essentials of transcriptomic methods: Navigating through RNA sequencing and beyond
V. Stopa, M. Sopić, G. Li, J. Sluimer, J. Basílio, S.W. van der Laan, D.P. Kreil, Y. Devaux, B. Hochreiter, in:, Y. Devaux, M. Sopic (Eds.), Transcriptomics in Atherosclerosis, Elsevier, 2025, pp. 131–172.
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V. Stopa, M. Sopić, G. Li, J. Sluimer, J. Basílio, S.W. van der Laan, D.P. Kreil, Y. Devaux, B. Hochreiter, in:, Y. Devaux, M. Sopic (Eds.), Transcriptomics in Atherosclerosis, Elsevier, 2025, pp. 131–172.
2025 | Research Data Reference | IST-REx-ID: 20883 |
The neural basis of species-specific defensive behaviour in Peromyscus mice
B. Felix, K. Reinhard, B. Nuttin, A. Sans Dublanc, C. Liu, V. Tong, J.S. Murmann, K. Wierda, K. Farrow, H. Hoekstra, (2025).
[Submitted Version]
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B. Felix, K. Reinhard, B. Nuttin, A. Sans Dublanc, C. Liu, V. Tong, J.S. Murmann, K. Wierda, K. Farrow, H. Hoekstra, (2025).
2025 | Published | Journal Article | IST-REx-ID: 20404 |
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Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV
Y. Ishikawa, M.A. Toups, M.N. Elkrewi, A.L. Zajac, S. Horne-Badovinac, Y. Matsubayashi, Matrix Biology 141 (2025) 101–113.
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Y. Ishikawa, M.A. Toups, M.N. Elkrewi, A.L. Zajac, S. Horne-Badovinac, Y. Matsubayashi, Matrix Biology 141 (2025) 101–113.
2025 | Published | Journal Article | IST-REx-ID: 20330 |
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The relationship between sexual dimorphism and intersex correlation: Do models support intuition?
G. Puixeu Sala, L. Hayward, Genetics 231 (2025).
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G. Puixeu Sala, L. Hayward, Genetics 231 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20457 |
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‘Mini analysis’ misrepresents changes in synaptic properties due to incomplete event detection
I.H. Greger, J. Watson, Journal of Physiology 603 (2025) 7189–7205.
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I.H. Greger, J. Watson, Journal of Physiology 603 (2025) 7189–7205.
2025 | Published | Journal Article | IST-REx-ID: 20866 |
Hypernode automata
E. Bartocci, M. Chalupa, T.A. Henzinger, D. Nickovic, A. Oliveira da Costa, Acta Informatica 62 (2025).
[Published Version]
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E. Bartocci, M. Chalupa, T.A. Henzinger, D. Nickovic, A. Oliveira da Costa, Acta Informatica 62 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20864 |
JWST provides a new view of cosmic dawn: Latest developments in studies of early galaxies
J.J. Matthee, Contemporary Physics 66 (2025) 116–151.
[Preprint]
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J.J. Matthee, Contemporary Physics 66 (2025) 116–151.
2025 | Published | Journal Article | IST-REx-ID: 20430 |
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Design of facilitated dissociation enables timing of cytokine signalling
Broerman AJ, Pollmann C, Zhao Y, Lichtenstein MA, Jackson MD, Tessmer MH, Ryu WH, Ogishi M, Abedi MH, Sahtoe DD, Allen A, Kang A, De La Cruz J, Brackenbrough E, Sankaran B, Bera AK, Zuckerman DM, Stoll S, Garcia KC, Praetorius FM, Piehler J, Baker D. 2025. Design of facilitated dissociation enables timing of cytokine signalling. Nature. 647, 528–535.
[Published Version]
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Broerman AJ, Pollmann C, Zhao Y, Lichtenstein MA, Jackson MD, Tessmer MH, Ryu WH, Ogishi M, Abedi MH, Sahtoe DD, Allen A, Kang A, De La Cruz J, Brackenbrough E, Sankaran B, Bera AK, Zuckerman DM, Stoll S, Garcia KC, Praetorius FM, Piehler J, Baker D. 2025. Design of facilitated dissociation enables timing of cytokine signalling. Nature. 647, 528–535.
2025 | Published | Journal Article | IST-REx-ID: 20480 |
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Mountain glaciers recouple to atmospheric warming over the twenty-first century
T. Shaw, E.S. Miles, M. McCarthy, P. Buri, N. Guyennon, F. Salerno, L. Carturan, B. Brock, F. Pellicciotti, Nature Climate Change 15 (2025) 1212–1218.
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T. Shaw, E.S. Miles, M. McCarthy, P. Buri, N. Guyennon, F. Salerno, L. Carturan, B. Brock, F. Pellicciotti, Nature Climate Change 15 (2025) 1212–1218.
2025 | Published | Journal Article | IST-REx-ID: 20367 |
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Pairs of commuting integer matrices
T.D. Browning, W. Sawin, V. Wang, Mathematische Annalen 393 (2025) 1863–1880.
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| arXiv
T.D. Browning, W. Sawin, V. Wang, Mathematische Annalen 393 (2025) 1863–1880.
2025 | Published | Journal Article | IST-REx-ID: 20429
Biotic interactions between trees and colonizing shrubs: Implications for active restoration in southern Patagonian forests
G.N. Bustamante, M.E. Arena, L. Selzer, M. Ruggirello, P. Rodríguez, S. Pedrazzani, J.A. Navarro-Cano, R.M. Soler Schaller, Plant Ecology 226 (2025) 1301–1313.
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G.N. Bustamante, M.E. Arena, L. Selzer, M. Ruggirello, P. Rodríguez, S. Pedrazzani, J.A. Navarro-Cano, R.M. Soler Schaller, Plant Ecology 226 (2025) 1301–1313.
2025 | Published | Journal Article | IST-REx-ID: 20432
Chiral phonons
Juraschek DM, Geilhufe RM, Zhu H, Basini M, Baum P, Baydin A, Chaudhary S, Fechner M, Flebus B, Grissonnanche G, Kirilyuk AI, Lemeshko M, Maehrlein SF, Mignolet M, Murakami S, Niu Q, Nowak U, Romao CP, Rostami H, Satoh T, Spaldin NA, Ueda H, Zhang L. 2025. Chiral phonons. Nature Physics. 21, 1532–1540.
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Juraschek DM, Geilhufe RM, Zhu H, Basini M, Baum P, Baydin A, Chaudhary S, Fechner M, Flebus B, Grissonnanche G, Kirilyuk AI, Lemeshko M, Maehrlein SF, Mignolet M, Murakami S, Niu Q, Nowak U, Romao CP, Rostami H, Satoh T, Spaldin NA, Ueda H, Zhang L. 2025. Chiral phonons. Nature Physics. 21, 1532–1540.
2025 | Published | Journal Article | IST-REx-ID: 20190 |
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Genealogical analysis of replicate flower colour hybrid zones in Antirrhinum
A. Pal, D. Shipilina, A. Le Moan, A.J. Mcnairn, J.K. Grenier, M. Kucka, G. Coop, Y.F. Chan, N.H. Barton, D. Field, S. Stankowski, Molecular Ecology 34 (2025).
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A. Pal, D. Shipilina, A. Le Moan, A.J. Mcnairn, J.K. Grenier, M. Kucka, G. Coop, Y.F. Chan, N.H. Barton, D. Field, S. Stankowski, Molecular Ecology 34 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20604 |
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TXNIP mediates LAT1/SLC7A5 endocytosis to limit amino acid uptake in cells entering quiescence
Kahlhofer J, Marchet N, Zubak K, Seifert B, Hotze M, Egger-Hörschinger A-S, Kucej L, Manzl C, Weyer Y, Weys S, Offterdinger M, Herzog S, Reiterer V, Volani C, Kwiatkowski M, Wortmann SB, Nemati S, Mayr JA, Zschocke J, Radlinger B, Thedieck K, Kremser L, Sarg B, Huber LA, Farhan H, de Araujo MEG, Kaser S, Scholl-Bürgi S, Karall D, Teis D. 2025. TXNIP mediates LAT1/SLC7A5 endocytosis to limit amino acid uptake in cells entering quiescence. The EMBO Journal. 44, 7119–7153.
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Kahlhofer J, Marchet N, Zubak K, Seifert B, Hotze M, Egger-Hörschinger A-S, Kucej L, Manzl C, Weyer Y, Weys S, Offterdinger M, Herzog S, Reiterer V, Volani C, Kwiatkowski M, Wortmann SB, Nemati S, Mayr JA, Zschocke J, Radlinger B, Thedieck K, Kremser L, Sarg B, Huber LA, Farhan H, de Araujo MEG, Kaser S, Scholl-Bürgi S, Karall D, Teis D. 2025. TXNIP mediates LAT1/SLC7A5 endocytosis to limit amino acid uptake in cells entering quiescence. The EMBO Journal. 44, 7119–7153.
2025 | Published | Journal Article | IST-REx-ID: 19603 |
Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound
J. Lill, K.H. Petrova, S. Weber, Algorithmica 87 (2025) 983–1007.
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J. Lill, K.H. Petrova, S. Weber, Algorithmica 87 (2025) 983–1007.
2025 | Published | Thesis | IST-REx-ID: 20694
Using genealogies to study the genomic basis of species divergence
A. Pal, Using Genealogies to Study the Genomic Basis of Species Divergence, Institute of Science and Technology Austria, 2025.
[Published Version]
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A. Pal, Using Genealogies to Study the Genomic Basis of Species Divergence, Institute of Science and Technology Austria, 2025.