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5799 Publications
2025 | Published | Journal Article | IST-REx-ID: 18778 |

Mechanism of mammalian transcriptional repression by noncoding RNA
K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural & Molecular Biology 32 (2025) 607–612.
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K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural & Molecular Biology 32 (2025) 607–612.
2025 | Published | Journal Article | IST-REx-ID: 15016 |

Adeno-associated viral tools to trace neural development and connectivity across amphibians
Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Ortega Gurrola A, Shvartsman A, Barbieri F, Toma F-A, Gorbsky GJ, Horb ME, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB. 2025. Adeno-associated viral tools to trace neural development and connectivity across amphibians. Developmental Cell. 60(5), 794–812.e6.
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Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Ortega Gurrola A, Shvartsman A, Barbieri F, Toma F-A, Gorbsky GJ, Horb ME, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB. 2025. Adeno-associated viral tools to trace neural development and connectivity across amphibians. Developmental Cell. 60(5), 794–812.e6.
2025 | Published | Thesis | IST-REx-ID: 18979 |

Structures and computations in topological data analysis
O. Draganov, Structures and Computations in Topological Data Analysis, Institute of Science and Technology Austria, 2025.
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O. Draganov, Structures and Computations in Topological Data Analysis, Institute of Science and Technology Austria, 2025.
2025 | Published | Journal Article | IST-REx-ID: 19797 |

The mass distribution of stars stripped in binaries: The effect of metallicity
B. Hovis-Afflerbach, Y.L.L. Götberg, A. Schootemeijer, J. Klencki, A.L. Strom, B.A. Ludwig, M.R. Drout, Astronomy and Astrophysics 697 (2025).
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B. Hovis-Afflerbach, Y.L.L. Götberg, A. Schootemeijer, J. Klencki, A.L. Strom, B.A. Ludwig, M.R. Drout, Astronomy and Astrophysics 697 (2025).
2025 | Published | Thesis | IST-REx-ID: 19722
Molecular mechanisms of microtubule reorganization in elongating root epidermal cells
S. Inumella, Molecular Mechanisms of Microtubule Reorganization in Elongating Root Epidermal Cells, Institute of Science and Technology Austria, 2025.
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S. Inumella, Molecular Mechanisms of Microtubule Reorganization in Elongating Root Epidermal Cells, Institute of Science and Technology Austria, 2025.
2025 | Research Data | IST-REx-ID: 19791 |

Research Data for "Mass-Assisted Local Deconfinement in a Confined Z2 Lattice Gauge Theory"
J.-Y.M. Desaules, (2025).
[Preprint]
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J.-Y.M. Desaules, (2025).
2025 | Published | Journal Article | IST-REx-ID: 19436 |

DNA methylation dynamics in male germline development in Brassica Rapa
J. Zhang, D. Wu, Y. Zhang, X. Feng, H. Gao, Molecular Horticulture 5 (2025).
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J. Zhang, D. Wu, Y. Zhang, X. Feng, H. Gao, Molecular Horticulture 5 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19627 |

Privacy for free in the overparameterized regime
S. Bombari, M. Mondelli, Proceedings of the National Academy of Sciences 122 (2025).
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S. Bombari, M. Mondelli, Proceedings of the National Academy of Sciences 122 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19595 |

How local is “local”? Deep learning reveals locality of the induced magnetic field of polycyclic aromatic hydrocarbons
Y. Davidson, A. Philipp, S. Chakraborty, A.M. Bronstein, R. Gershoni-Poranne, Journal of Chemical Physics 162 (2025).
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Y. Davidson, A. Philipp, S. Chakraborty, A.M. Bronstein, R. Gershoni-Poranne, Journal of Chemical Physics 162 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19437 |

Domain-wall ferroelectric polarons in a two-dimensional rotor lattice model
F. Kluibenschedl, G. Koutentakis, R. Al Hyder, M. Lemeshko, Physical Review Letters 134 (2025).
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F. Kluibenschedl, G. Koutentakis, R. Al Hyder, M. Lemeshko, Physical Review Letters 134 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19625 |

Operator-valued twisted Araki–Woods algebras
R.R. Kumar, M. Wirth, Communications in Mathematical Physics 406 (2025).
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R.R. Kumar, M. Wirth, Communications in Mathematical Physics 406 (2025).
2025 | In Press | Journal Article | IST-REx-ID: 19602 |

Extensive N4 cytosine methylation is essential for Marchantia sperm function
J. Walker, J. Zhang, Y. Liu, S. Xu, Y. Yu, M. Vickers, W. Ouyang, J. Tálas, L. Dolan, K. Nakajima, X. Feng, Cell (n.d.).
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J. Walker, J. Zhang, Y. Liu, S. Xu, Y. Yu, M. Vickers, W. Ouyang, J. Tálas, L. Dolan, K. Nakajima, X. Feng, Cell (n.d.).
2025 | Published | Journal Article | IST-REx-ID: 19594
Unlocking plant regeneration: The role for glutathione
E. Benková, Developmental Cell 60 (2025) 1137–1139.
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E. Benková, Developmental Cell 60 (2025) 1137–1139.
2025 | Published | Journal Article | IST-REx-ID: 19664 |

Quantum many-body scars beyond the PXP model in Rydberg simulators
A. Kerschbaumer, M. Ljubotina, M. Serbyn, J.-Y.M. Desaules, Physical Review Letters 134 (2025).
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A. Kerschbaumer, M. Ljubotina, M. Serbyn, J.-Y.M. Desaules, Physical Review Letters 134 (2025).
2025 | Research Data | IST-REx-ID: 19623 |

Research Data for "Quantum Many-Body Scars beyond the PXP Model in Rydberg Simulators"
J.-Y.M. Desaules, (2025).
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J.-Y.M. Desaules, (2025).
2025 | In Press | Journal Article | IST-REx-ID: 19507 |

Spatiotemporal switches in progenitor cell fate govern upper hair follicle growth and maintenance
M.S. Andersen, S. Ulyanchenko, P.J. Schweiger, E.B. Hannezo, B.D. Simons, K.B. Jensen, Journal of Investigative Dermatology (n.d.).
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M.S. Andersen, S. Ulyanchenko, P.J. Schweiger, E.B. Hannezo, B.D. Simons, K.B. Jensen, Journal of Investigative Dermatology (n.d.).
2025 | Published | Journal Article | IST-REx-ID: 19280 |

Observation of collapse and revival in a superconducting atomic frequency comb
E. Redchenko, M. Zens, M. Zemlicka, M. Peruzzo, F. Hassani, R. Sett, P.D. Zielinski, H.S. Dhar, D.O. Krimer, S. Rotter, J.M. Fink, Physical Review Letters 134 (2025).
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E. Redchenko, M. Zens, M. Zemlicka, M. Peruzzo, F. Hassani, R. Sett, P.D. Zielinski, H.S. Dhar, D.O. Krimer, S. Rotter, J.M. Fink, Physical Review Letters 134 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19073 |

All-optical superconducting qubit readout
G.M. Arnold, T. Werner, R. Sahu, L. Kapoor, L. Qiu, J.M. Fink, Nature Physics 21 (2025).
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G.M. Arnold, T. Werner, R. Sahu, L. Kapoor, L. Qiu, J.M. Fink, Nature Physics 21 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19731 |

Let us FIGURE it out: Why do scientists still make “bad” figures?
A. Rayaroth Puthiyaveettil, C. Fiedler, M. Ibáñez, ACS Materials Au 5 (2025) 438–440.
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A. Rayaroth Puthiyaveettil, C. Fiedler, M. Ibáñez, ACS Materials Au 5 (2025) 438–440.
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19725 |

A F420-dependent single domain chemogenetic tool for protein de-dimerization
J. Antoney, S. Kainrath, J.G. Dubowsky, F.H. Ahmed, S.W. Kang, E.R.R. Mackie, G. Bracho Granado, T.P. Soares Da Costa, C.J. Jackson, H.L. Janovjak, Journal of Molecular Biology 437 (2025).
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J. Antoney, S. Kainrath, J.G. Dubowsky, F.H. Ahmed, S.W. Kang, E.R.R. Mackie, G. Bracho Granado, T.P. Soares Da Costa, C.J. Jackson, H.L. Janovjak, Journal of Molecular Biology 437 (2025).