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6713 Publications

2025 | Published | Journal Article | IST-REx-ID: 20926 |

Kim, Dongjin, Xiaoyu Wang, Santiago Vargas, Peichen Zhong, Daniel S. King, Theo Jaffrelot Inizan, and Bingqing Cheng. “A Universal Augmentation Framework for Long-Range Electrostatics in Machine Learning Interatomic Potentials.” Journal of Chemical Theory and Computation. American Chemical Society, 2025. https://doi.org/10.1021/acs.jctc.5c01400.

Zhong, Peichen, Dongjin Kim, Daniel S. King, and Bingqing Cheng. “Machine Learning Interatomic Potential Can Infer Electrical Response.” Npj Computational Materials. Springer Nature, 2025. https://doi.org/10.1038/s41524-025-01911-z.

[Published Version] View | Files available | DOI

Zeng, Zezhu, Zheyong Fan, Michele Simoncelli, Chen Chen, Ting Liang, Yue Chen, Geoff Thornton, and Bingqing Cheng. “Lattice Distortion Leads to Glassy Thermal Transport in Crystalline Cs3Bi2I6Cl3.” Proceedings of the National Academy of Sciences. National Academy of Sciences, 2025. https://doi.org/10.1073/pnas.2415664122.

2025 | Published | Journal Article | IST-REx-ID: 20011 |

Zeng, Zezhu, Xia Liang, Zheyong Fan, Yue Chen, Michele Simoncelli, and Bingqing Cheng. “Thermal Transport of Amorphous Hafnia across the Glass Transition.” ACS Materials Letters. American Chemical Society, 2025. https://doi.org/10.1021/acsmaterialslett.5c00263.

[Published Version] View | Files available | DOI | WoS

2025 | Published | Journal Article | IST-REx-ID: 19495 |

Cheng, Bingqing. “Latent Ewald Summation for Machine Learning of Long-Range Interactions.” Npj Computational Materials. Springer Nature, 2025. https://doi.org/10.1038/s41524-025-01577-7.

[Published Version] View | Files available | DOI | WoS | arXiv

2025 | Published | Journal Article | IST-REx-ID: 20702 |

King, Daniel S., Daniel Grzenda, Ray Zhu, Nathaniel Hudson, Ian Foster, Bingqing Cheng, and Laura Gagliardi. “Cartesian Equivariant Representations for Learning and Understanding Molecular Orbitals.” Proceedings of the National Academy of Sciences. National Academy of Sciences, 2025. https://doi.org/10.1073/pnas.2510235122.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2025 | Published | Journal Article | IST-REx-ID: 20704

Tuo, Ping, Zezhu Zeng, Jiale Chen, and Bingqing Cheng. “Scalable Multitemperature Free Energy Sampling of Classical Ising Spin States.” Journal of Chemical Theory and Computation. American Chemical Society, 2025. https://doi.org/10.1021/acs.jctc.5c01248.

Schmied, Verena, Medina Korkut, Alessandro Venturino, Juan Pablo Maya-Arteaga, and Sandra Siegert. “Microglia Determine an Immune-Challenged Environment and Facilitate Ibuprofen Action in Human Retinal Organoids.” Journal of Neuroinflammation. Springer Nature, 2025. https://doi.org/10.1186/s12974-025-03366-x.

2025 | Published | Thesis | PhD | IST-REx-ID: 20074 |

Schmied, Verena. “Human Microglia Impact Neuronal Development in Retinal Organoids.” Institute of Science and Technology Austria, 2025. https://doi.org/10.15479/AT-ISTA-20074.

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 19372 |

Brooks, Morris, and David Johannes Mitrouskas. “Asymptotic Series for Low-Energy Excitations of the Fröhlich Polaron at Strong Coupling.” Probability and Mathematical Physics. Mathematical Sciences Publishers, 2025. https://doi.org/10.2140/pmp.2025.6.281.

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

Boker, Udi, Thomas A Henzinger, Nicolas Adrien Mazzocchi, and Naci E Sarac. “Safety and Liveness of Quantitative Properties and Automata.” Logical Methods in Computer Science. EPI Sciences, 2025. https://doi.org/10.46298/lmcs-21(2:2)2025.

[Published Version] View | Files available | DOI | WoS | arXiv

2025 | Published | Journal Article | IST-REx-ID: 19701 |

Tkačik, Gašper, and Pieter Rein Ten Wolde. “Information Processing in Biochemical Networks.” Annual Review of Biophysics. Annual Reviews, 2025. https://doi.org/10.1146/annurev-biophys-060524-102720.

Moriyama, Yuuta, Toshiyuki Mitsui, and Carl-Philipp J Heisenberg. “Hoxb Genes Determine the Timing of Cell Ingression by Regulating Cell Surface Fluctuations during Zebrafish Gastrulation.” Development. Company of Biologists, 2025. https://doi.org/10.1242/dev.204261.

Browning, Timothy D, and Stephanie Chan. “Solubility of a Resultant Equation and Applications.” Journal de l’Ecole Polytechnique - Mathematiques. Ecole Polytechnique, 2025. https://doi.org/10.5802/jep.320.

[Published Version] View | Files available | DOI | arXiv

Browning, Timothy D, and Florian Alexander Wilsch. “Integral Points on Cubic Surfaces: Heuristics and Numerics.” Selecta Mathematica New Series. Springer Nature, 2025. https://doi.org/10.1007/s00029-025-01074-1.

[Published Version] View | Files available | DOI | WoS | arXiv

Volpe G, Araújo NAM, Guix M, Miodownik M, Martin N, Alvarez L, Simmchen J, Leonardo RD, Pellicciotta N, Martinet Q, Palacci JA, Ng WK, Saxena D, Sapienza R, Nadine S, Mano JF, Mahdavi R, Beck Adiels C, Forth J, Santangelo C, Palagi S, Seok JM, Webster-Wood VA, Wang S, Yao L, Aghakhani A, Barois T, Kellay H, Coulais C, Van Hecke M, Pierce CJ, Wang T, Chong B, Goldman DI, Reina A, Trianni V, Volpe G, Beckett R, Nair SP, Armstrong R. 2025. Roadmap for animate matter. Journal of Physics: Condensed Matter. 37(33), 333501.

[Published Version] View | Files available | DOI | WoS | arXiv

Farooq, Hamza, and Muhammad Nauman. “Non-Linear Magnetotropic Susceptibility in FePS3.” Journal of Physics: Condensed Matter. IOP Publishing, 2025. https://doi.org/10.1088/1361-648X/ae0913.

2025 | Published | Journal Article | IST-REx-ID: 20219

Ayalon, Oran, and Harikrishnan Rajendran. “Interplay of Asexual and Sexual Reproduction in Bifunctional Insects.” Journal of the Royal Society Interface. Royal Society, 2025. https://doi.org/10.1098/rsif.2025.0202.

View | DOI | WoS | PubMed | Europe PMC

2025 | Submitted | Preprint | IST-REx-ID: 19762 |

Cárdenas, Adrián, Irem Çelik, Alexandre Espinós, Carmen Streicher, Lara López-González, Lucia del-Valle-Anton, Virginia Fernández, et al. “Early Indirect Neurogenesis Transitions to Late Direct Neurogenesis in Mouse Cerebral Cortex Development.” BioRxiv, n.d. https://doi.org/10.1101/2025.05.22.655488.

[Preprint] View | DOI | Download Preprint (ext.) | bioRxiv

2025 | Submitted | Preprint | IST-REx-ID: 19717 |

Varela-Martínez, I, Ana Villalba Requena, J. Garcia-Marqués, Simon Hippenmeyer, and M. Nieto. “Early Emergence of Projection-Subtype Fate-Restricted Radial Glial Progenitors Orchestrates Neocortical Neurogenesis.” BioRxiv, n.d. https://doi.org/10.1101/2025.05.07.652665.

[Preprint] View | DOI | Download Preprint (ext.)

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