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5339 Publications

2017 | Published | Journal Article | IST-REx-ID: 1066
Quantitative fair simulation games
K. Chatterjee, T.A. Henzinger, J. Otop, Y. Velner, Information and Computation 254 (2017) 143–166.
View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1067 | OA
The physical basis of coordinated tissue spreading in zebrafish gastrulation
H. Morita, S. Grigolon, M. Bock, G. Krens, G. Salbreux, C.-P.J. Heisenberg, Developmental Cell 40 (2017) 354–366.
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1072 | OA
The Morse theory of Čech and delaunay complexes
U. Bauer, H. Edelsbrunner, Transactions of the American Mathematical Society 369 (2017) 3741–3762.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2017 | Published | Journal Article | IST-REx-ID: 1073 | OA
Algorithmic solvability of the lifting extension problem
M. Čadek, M. Krcál, L. Vokřínek, Discrete & Computational Geometry 54 (2017) 915–965.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1076 | OA
Strong-field ionization via a high-order Coulomb-corrected strong-field approximation
M. Klaiber, J. Daněk, E. Yakaboylu, K. Hatsagortsyan, C. Keitel, Physical Review A - Atomic, Molecular, and Optical Physics 95 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1077 | OA
Evolutionary interplay between structure, energy and epistasis in the coat protein of the ϕX174 phage family
R.A. Fernandes Redondo, H. de Vladar, T. Włodarski, J.P. Bollback, Journal of the Royal Society Interface 14 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1078 | OA
Light sheet fluorescence microscopy of plant roots growing on the surface of a gel
D. von Wangenheim, R. Hauschild, J. Friml, Journal of Visualized Experiments JoVE 2017 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1079 | OA
Nonexistence in Thomas Fermi-Dirac-von Weizsäcker theory with small nuclear charges
P. Nam, H. Van Den Bosch, Mathematical Physics, Analysis and Geometry 20 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1080 | OA
Reconstructing metastatic seeding patterns of human cancers
J. Reiter, A. Makohon Moore, J. Gerold, I. Božić, K. Chatterjee, C. Iacobuzio Donahue, B. Vogelstein, M. Nowak, Nature Communications 8 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 947 | OA
Quantifying the entropic cost of cellular growth control
D. De Martino, F. Capuani, A. De Martino, Physical Review E Statistical Nonlinear and Soft Matter Physics 96 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2017 | Published | Conference Paper | IST-REx-ID: 950 | OA
Infinite-duration bidding games
G. Avni, T.A. Henzinger, V.K. Chonev, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
[Published Version] View | Files available | DOI | arXiv
 
2017 | Published | Journal Article | IST-REx-ID: 9506 | OA
An evolutionary case for functional gene body methylation in plants and animals
D. Zilberman, Genome Biology 18 (2017).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2017 | Published | Journal Article | IST-REx-ID: 951 | OA
Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology 15 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 952 | OA
Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti
M. Turelli, N.H. Barton, Theoretical Population Biology 115 (2017) 45–60.
[Submitted Version] View | Files available | DOI | PubMed | Europe PMC
 
2017 | Published | Journal Article | IST-REx-ID: 953 | OA
The sources of adaptive evolution
D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2017 | Published | Journal Article | IST-REx-ID: 954 | OA
On the mechanistic nature of epistasis in a canonical cis-regulatory element
M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 956 | OA
Gradient flow and entropy inequalities for quantum Markov semigroups with detailed balance
E. Carlen, J. Maas, Journal of Functional Analysis 273 (2017) 1810–1869.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2017 | Published | Book Chapter | IST-REx-ID: 957
Ancestral protein reconstruction and circular permutation for improving the stability and dynamic range of FRET sensors
B. Clifton, J. Whitfield, I. Sanchez-Romero, M. Herde, C. Henneberger, H.L. Janovjak, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 71–87.
View | DOI
 
2017 | Published | Book Chapter | IST-REx-ID: 958
Method for developing optical sensors using a synthetic dye fluorescent protein FRET pair and computational modeling and assessment
J. Mitchell, W. Zhang, M. Herde, C. Henneberger, H.L. Janovjak, M. O’Mara, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 89–99.
View | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 959 | OA
Scales and multimodal flux distributions in stationary metabolic network models via thermodynamics
D. De Martino, Physical Review E Statistical Nonlinear and Soft Matter Physics 95 (2017) 062419.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 

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