Wiebke Jahr
Danzl Group
8 Publications
2025 | Published | Journal Article | IST-REx-ID: 19795 |

Vorlaufer J, Semenov N, Kreuzinger C, et al. Image-based 3D active sample stabilization on the nanometer scale for optical microscopy. Biophysical Reports. 2025;5(2). doi:10.1016/j.bpr.2025.100211
[Published Version]
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2025 | Published | Journal Article | IST-REx-ID: 19003 |
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Gallei MC, Truckenbrodt SM, Kreuzinger C, et al. Super-resolution expansion microscopy in plant roots. The Plant Cell. 2025;37(4). doi:10.1093/plcell/koaf006
[Published Version]
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| PubMed | Europe PMC
2024 | Draft | Preprint | IST-REx-ID: 18689 |

Gallei MC, Truckenbrodt SM, Kreuzinger C, et al. Super-resolution expansion microscopy in plant roots. bioRxiv. doi:10.1101/2024.02.21.581330
[Preprint]
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2023 | Published | Journal Article | IST-REx-ID: 13267 |

Velicky P, Miguel Villalba E, Michalska JM, et al. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 2023;20:1256-1265. doi:10.1038/s41592-023-01936-6
[Published Version]
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2022 | Draft | Preprint | IST-REx-ID: 11943 |

Velicky P, Miguel Villalba E, Michalska JM, et al. Saturated reconstruction of living brain tissue. bioRxiv. doi:10.1101/2022.03.16.484431
[Preprint]
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2021 | Published | Journal Article | IST-REx-ID: 9258 |

Pinkard H, Stuurman N, Ivanov IE, Anthony NM, Ouyang W, Li B, Yang B, Tsuchida MA, Chhun B, Zhang G, Mei R, Anderson M, Shepherd DP, Hunt-Isaak I, Dunn RL, Jahr W, Kato S, Royer LA, Thiagarajah JR, Eliceiri KW, Lundberg E, Mehta SB, Waller L. 2021. Pycro-Manager: Open-source software for customized and reproducible microscope control. Nature Methods. 18(3), 226–228.
[Published Version]
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2020 | Published | Journal Article | IST-REx-ID: 6808 |

Jahr W, Velicky P, Danzl JG. Strategies to maximize performance in STimulated Emission Depletion (STED) nanoscopy of biological specimens. Methods. 2020;174(3):27-41. doi:10.1016/j.ymeth.2019.07.019
[Submitted Version]
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2019 | Published | Journal Article | IST-REx-ID: 6029 |

Lindner M, Tresztenyak A, Fülöp G, et al. A fast and simple contact printing approach to generate 2D protein nanopatterns. Frontiers in Chemistry. 2019;6. doi:10.3389/fchem.2018.00655
[Published Version]
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1 Grants
High-speed 3D-nanoscopy to study the role of adhesion during 3D cell migration
2018-07-01 – 2021-04-30
Human Frontier Science Program
8 Publications
2025 | Published | Journal Article | IST-REx-ID: 19795 |

Vorlaufer J, Semenov N, Kreuzinger C, et al. Image-based 3D active sample stabilization on the nanometer scale for optical microscopy. Biophysical Reports. 2025;5(2). doi:10.1016/j.bpr.2025.100211
[Published Version]
View
| Files available
| DOI
2025 | Published | Journal Article | IST-REx-ID: 19003 |
|


Gallei MC, Truckenbrodt SM, Kreuzinger C, et al. Super-resolution expansion microscopy in plant roots. The Plant Cell. 2025;37(4). doi:10.1093/plcell/koaf006
[Published Version]
View
| Files available
| DOI
| PubMed | Europe PMC
2024 | Draft | Preprint | IST-REx-ID: 18689 |

Gallei MC, Truckenbrodt SM, Kreuzinger C, et al. Super-resolution expansion microscopy in plant roots. bioRxiv. doi:10.1101/2024.02.21.581330
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
2023 | Published | Journal Article | IST-REx-ID: 13267 |

Velicky P, Miguel Villalba E, Michalska JM, et al. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 2023;20:1256-1265. doi:10.1038/s41592-023-01936-6
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2022 | Draft | Preprint | IST-REx-ID: 11943 |

Velicky P, Miguel Villalba E, Michalska JM, et al. Saturated reconstruction of living brain tissue. bioRxiv. doi:10.1101/2022.03.16.484431
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
2021 | Published | Journal Article | IST-REx-ID: 9258 |

Pinkard H, Stuurman N, Ivanov IE, Anthony NM, Ouyang W, Li B, Yang B, Tsuchida MA, Chhun B, Zhang G, Mei R, Anderson M, Shepherd DP, Hunt-Isaak I, Dunn RL, Jahr W, Kato S, Royer LA, Thiagarajah JR, Eliceiri KW, Lundberg E, Mehta SB, Waller L. 2021. Pycro-Manager: Open-source software for customized and reproducible microscope control. Nature Methods. 18(3), 226–228.
[Published Version]
View
| DOI
| Download Published Version (ext.)
| WoS
| PubMed | Europe PMC
2020 | Published | Journal Article | IST-REx-ID: 6808 |

Jahr W, Velicky P, Danzl JG. Strategies to maximize performance in STimulated Emission Depletion (STED) nanoscopy of biological specimens. Methods. 2020;174(3):27-41. doi:10.1016/j.ymeth.2019.07.019
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| WoS
| PubMed | Europe PMC
2019 | Published | Journal Article | IST-REx-ID: 6029 |

Lindner M, Tresztenyak A, Fülöp G, et al. A fast and simple contact printing approach to generate 2D protein nanopatterns. Frontiers in Chemistry. 2019;6. doi:10.3389/fchem.2018.00655
[Published Version]
View
| Files available
| DOI
| WoS