Julia Lyudchik

Graduate School
Danzl Group

9 Publications

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[9]
2025 | Research Data | IST-REx-ID: 18697 | OA
Danzl JG, Lyudchik J, Kreuzinger C. 2025. Light-microscopy based connectomic reconstruction of mammalian brain tissue, Institute of Science and Technology Austria, 10.15479/AT:ISTA:18697.
[Published Version] View | Files available | DOI
 
[8]
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19704 | OA
Tavakoli M, Lyudchik J, Januszewski M, Vistunou V, Agudelo Duenas N, Vorlaufer J, Sommer CM, Kreuzinger C, Oliveira B, Cenameri A, Novarino G, Jain V, Danzl JG. 2025. Light-microscopy-based connectomic reconstruction of mammalian brain tissue. Nature., e57443.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[7]
2025 | Published | Journal Article | IST-REx-ID: 19795 | OA
Vorlaufer J, Semenov N, Kreuzinger C, Javoor M, Zens B, Agudelo Duenas N, Tavakoli M, Suplata M, Jahr W, Lyudchik J, Wartak A, Schur FK, Danzl JG. 2025. Image-based 3D active sample stabilization on the nanometer scale for optical microscopy. Biophysical Reports. 5(2), 100211.
[Published Version] View | Files available | DOI
 
[6]
2024 | Published | Thesis | IST-REx-ID: 18674 | OA
Lyudchik J. 2024. Image analysis for brain tissue reconstruction with super-resolution light microscopy. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 
[5]
2024 | Published | Journal Article | IST-REx-ID: 14257 | OA
Michalska JM, Lyudchik J, Velicky P, Korinkova H, Watson J, Cenameri A, Sommer CM, Amberg N, Venturino A, Roessler K, Czech T, Höftberger R, Siegert S, Novarino G, Jonas PM, Danzl JG. 2024. Imaging brain tissue architecture across millimeter to nanometer scales. Nature Biotechnology. 42, 1051–1064.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[4]
2024 | Draft | Preprint | IST-REx-ID: 18677 | OA
Tavakoli M, Lyudchik J, Januszewski M, Vistunou V, Agudelo Duenas N, Vorlaufer J, Sommer CM, Kreuzinger C, Oliveira B, Cenameri A, Novarino G, Jain V, Danzl JG. Light-microscopy based dense connectomic reconstruction of mammalian brain tissue. bioRxiv, 10.1101/2024.03.01.582884.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[3]
2023 | Published | Journal Article | IST-REx-ID: 13267 | OA
Velicky P, Miguel Villalba E, Michalska JM, Lyudchik J, Wei D, Lin Z, Watson J, Troidl J, Beyer J, Ben Simon Y, Sommer CM, Jahr W, Cenameri A, Broichhagen J, Grant SGN, Jonas PM, Novarino G, Pfister H, Bickel B, Danzl JG. 2023. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 20, 1256–1265.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[2]
2022 | Published | Journal Article | IST-REx-ID: 11160 | OA
Villa CE, Cheroni C, Dotter C, López-Tóbon A, Oliveira B, Sacco R, Yahya AÇ, Morandell J, Gabriele M, Tavakoli M, Lyudchik J, Sommer CM, Gabitto M, Danzl JG, Testa G, Novarino G. 2022. CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories. Cell Reports. 39(1), 110615.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[1]
2022 | Draft | Preprint | IST-REx-ID: 11950 | OA
Michalska JM, Lyudchik J, Velicky P, Korinkova H, Watson J, Cenameri A, Sommer CM, Venturino A, Roessler K, Czech T, Siegert S, Novarino G, Jonas PM, Danzl JG. Uncovering brain tissue architecture across scales with super-resolution light microscopy. bioRxiv, 10.1101/2022.08.17.504272.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
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9 Publications

Mark all

[9]
2025 | Research Data | IST-REx-ID: 18697 | OA
Danzl JG, Lyudchik J, Kreuzinger C. 2025. Light-microscopy based connectomic reconstruction of mammalian brain tissue, Institute of Science and Technology Austria, 10.15479/AT:ISTA:18697.
[Published Version] View | Files available | DOI
 
[8]
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19704 | OA
Tavakoli M, Lyudchik J, Januszewski M, Vistunou V, Agudelo Duenas N, Vorlaufer J, Sommer CM, Kreuzinger C, Oliveira B, Cenameri A, Novarino G, Jain V, Danzl JG. 2025. Light-microscopy-based connectomic reconstruction of mammalian brain tissue. Nature., e57443.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[7]
2025 | Published | Journal Article | IST-REx-ID: 19795 | OA
Vorlaufer J, Semenov N, Kreuzinger C, Javoor M, Zens B, Agudelo Duenas N, Tavakoli M, Suplata M, Jahr W, Lyudchik J, Wartak A, Schur FK, Danzl JG. 2025. Image-based 3D active sample stabilization on the nanometer scale for optical microscopy. Biophysical Reports. 5(2), 100211.
[Published Version] View | Files available | DOI
 
[6]
2024 | Published | Thesis | IST-REx-ID: 18674 | OA
Lyudchik J. 2024. Image analysis for brain tissue reconstruction with super-resolution light microscopy. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 
[5]
2024 | Published | Journal Article | IST-REx-ID: 14257 | OA
Michalska JM, Lyudchik J, Velicky P, Korinkova H, Watson J, Cenameri A, Sommer CM, Amberg N, Venturino A, Roessler K, Czech T, Höftberger R, Siegert S, Novarino G, Jonas PM, Danzl JG. 2024. Imaging brain tissue architecture across millimeter to nanometer scales. Nature Biotechnology. 42, 1051–1064.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[4]
2024 | Draft | Preprint | IST-REx-ID: 18677 | OA
Tavakoli M, Lyudchik J, Januszewski M, Vistunou V, Agudelo Duenas N, Vorlaufer J, Sommer CM, Kreuzinger C, Oliveira B, Cenameri A, Novarino G, Jain V, Danzl JG. Light-microscopy based dense connectomic reconstruction of mammalian brain tissue. bioRxiv, 10.1101/2024.03.01.582884.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[3]
2023 | Published | Journal Article | IST-REx-ID: 13267 | OA
Velicky P, Miguel Villalba E, Michalska JM, Lyudchik J, Wei D, Lin Z, Watson J, Troidl J, Beyer J, Ben Simon Y, Sommer CM, Jahr W, Cenameri A, Broichhagen J, Grant SGN, Jonas PM, Novarino G, Pfister H, Bickel B, Danzl JG. 2023. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 20, 1256–1265.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[2]
2022 | Published | Journal Article | IST-REx-ID: 11160 | OA
Villa CE, Cheroni C, Dotter C, López-Tóbon A, Oliveira B, Sacco R, Yahya AÇ, Morandell J, Gabriele M, Tavakoli M, Lyudchik J, Sommer CM, Gabitto M, Danzl JG, Testa G, Novarino G. 2022. CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories. Cell Reports. 39(1), 110615.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[1]
2022 | Draft | Preprint | IST-REx-ID: 11950 | OA
Michalska JM, Lyudchik J, Velicky P, Korinkova H, Watson J, Cenameri A, Sommer CM, Venturino A, Roessler K, Czech T, Siegert S, Novarino G, Jonas PM, Danzl JG. Uncovering brain tissue architecture across scales with super-resolution light microscopy. bioRxiv, 10.1101/2022.08.17.504272.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
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Citation Style: ISTA Annual Report

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