Kineochelins - A new group of siderophores from an antarctic bacterium

Kralova S, Spacek P, Gafriller J, Bezdicek M, Medvedcova V, Séneca J, Osvatic J, Grienke U, Rattei T, Sekurova ON, Zotchev SB, Zehl M, Loy A. 2026. Kineochelins - A new group of siderophores from an antarctic bacterium. Microbial Biotechnology. 19(6), e70386.

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Author
Kralova, Stanislava; Spacek, Peter; Gafriller, Johannes; Bezdicek, Matej; Medvedcova, Viktoria; Séneca, Joana; Osvatic, Jay; Grienke, Ulrike; Rattei, Thomas; Sekurova, Olga N.; Zotchev, Sergey B.; Zehl, MartinISTA
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Corresponding author has ISTA affiliation

Abstract
The global rise of antimicrobial resistance has intensified the search for new microbial metabolites from underexplored environments and taxonomic groups. Extreme and geographically isolated habitats such as Antarctic terrestrial ecosystems represent promising reservoirs of biosynthetic diversity, particularly among rare and difficult-to-cultivate actinomycetes that may produce chemically diverse metabolites with potential biotechnological applications. Here, we report the characterization of kineochelins, a previously undescribed group of siderophores produced by the Antarctic isolate Actinokineospora sp. UV203, representing a difficult-to-cultivate actinomycete lineage. Structural elucidation revealed a set of closely related congeners with a mixed-ligand architecture consistent with metal-chelating activity. Genome mining combined with transcriptomic analysis identified a dedicated nonribosomal peptide synthetase-encoding biosynthetic gene cluster responsible for kineochelin production. Comparative genomic analyses indicated that, although kineochelin biosynthetic genes share limited similarity with known mixed-ligand siderophores, their gene content and organization differ substantially, suggesting a distinct biosynthetic lineage. Functional characterization of the culture supernatant and an enriched pre-purified kineochelin fraction demonstrated strong and selective iron chelation, with high affinity for ferric and ferrous iron. Crude culture extracts inhibited the growth of bacterial strains isolated from the same Antarctic environment, indicating that kineochelins may contribute to iron-mediated microbial competition. In addition, kineochelin-enriched pre-purified fractions showed moderate selective inhibitory activity against the opportunistic yeast pathogen Nakaseomyces glabratus and a clinical isolate of Saccharomyces cerevisiae associated with invasive infection. These findings expand the chemical and biosynthetic diversity known within the genus Actinokineospora and demonstrate that Antarctic rare actinomycetes represent valuable sources of previously unexplored natural products. The discovery of kineochelins highlights the potential of genome-guided exploration of polar microorganisms for identifying bioactive metabolites with relevance for antimicrobial discovery and biotechnology.
Publishing Year
Date Published
2026-06-01
Journal Title
Microbial Biotechnology
Publisher
Wiley
Acknowledgement
This work was supported by the Czech Antarctic Research Programme 2025–2027 (VAN 2025) and the University of Vienna via the Research Platform Secondary Metabolomes of Bacterial Communities (MetaBac). S.K. has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 101020356 (DEFCOMANT, https://doi.org/10.3030/101020356) and MASH StG/CoG (MUNI/SC/1946/2024) by Masaryk University. T.R. and A.L. were funded in part by the Austrian Science Fund FWF [grant DOI https://doi.org/10.55776/COE7]. M.B. was funded by the Ministry of Health, Czech Republic—conceptual development of research organization (FNBr, 65269705). The Life Science Compute Cluster LiSC at the University of Vienna provided the high-performance computing infrastructure for this study. We thank Julia Ramesmayer and Sara Malinowski (Joint Microbiome Facility of the Medical University of Vienna and the University of Vienna) for assistance during high molecular weight extraction and RNA extraction. The authors thank Anna Fabisikova and Michael Klemm-Abraham from the Mass Spectrometry Centre and the team of the NMR Centre (both core facilities of the Faculty of Chemistry, University of Vienna, and members of the Vienna Life Science Instruments) for assistance with data acquisition. We are thankful to Dr. Jaime Felipe Guerrero Garzón for helpful discussions on the use of a rrn operon promoter strategy. For open access purposes, the authors have applied for a CC BY public copyright licence to any author-accepted manuscript version arising from this submission. Dr. Martin Kello (Department of Pharmacology, Faculty of Medicine, Pavol Jozef Šafárik University, Košice, Slovakia) and Dr. Michal Goga (Department of Plant Biology, Faculty of Science and Center for Interdisciplinary Biosciences, Technology and Innovation Park, Pavol Jozef Šafárik University in Košice, Košice, Slovakia), funded by VEGA 1/0498/23, are acknowledged for their assistance with the antiproliferative assays. This work was supported by Horizon 2020 Framework Programme, 101020356; Universität Wien, MetaBac; Ministry of Education, Youth and Sports, VAN 2025; Masarykova Univerzita, MUNI/SC/1946/2024; Austrian Science Fund, 10.55776/COE7; Ministerstvo Zdravotnictví České Republiky, FNBr, 65269705; Vedecká grantová agentúra Ministerstva školstva, výskumu, vývoja a mládeže Slovenskej republiky a Slovenskej akadémie vied, VEGA 1/0498/23.
Volume
19
Issue
6
Article Number
e70386
eISSN
IST-REx-ID

Cite this

Kralova S, Spacek P, Gafriller J, et al. Kineochelins - A new group of siderophores from an antarctic bacterium. Microbial Biotechnology. 2026;19(6). doi:10.1111/1751-7915.70386
Kralova, S., Spacek, P., Gafriller, J., Bezdicek, M., Medvedcova, V., Séneca, J., … Loy, A. (2026). Kineochelins - A new group of siderophores from an antarctic bacterium. Microbial Biotechnology. Wiley. https://doi.org/10.1111/1751-7915.70386
Kralova, Stanislava, Peter Spacek, Johannes Gafriller, Matej Bezdicek, Viktoria Medvedcova, Joana Séneca, Jay Osvatic, et al. “Kineochelins - A New Group of Siderophores from an Antarctic Bacterium.” Microbial Biotechnology. Wiley, 2026. https://doi.org/10.1111/1751-7915.70386.
S. Kralova et al., “Kineochelins - A new group of siderophores from an antarctic bacterium,” Microbial Biotechnology, vol. 19, no. 6. Wiley, 2026.
Kralova S, Spacek P, Gafriller J, Bezdicek M, Medvedcova V, Séneca J, Osvatic J, Grienke U, Rattei T, Sekurova ON, Zotchev SB, Zehl M, Loy A. 2026. Kineochelins - A new group of siderophores from an antarctic bacterium. Microbial Biotechnology. 19(6), e70386.
Kralova, Stanislava, et al. “Kineochelins - A New Group of Siderophores from an Antarctic Bacterium.” Microbial Biotechnology, vol. 19, no. 6, e70386, Wiley, 2026, doi:10.1111/1751-7915.70386.
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PMID: 42210522
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bioRxiv 10.64898/2026.02.23.707395

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