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Roderich Römhild

Calin Guet

Nathalie Gruber

Athina Diakogianni

Ekaterina Krasnopeeva

Bryan Wu

Puzhen Xia

Stepan Ovchinnikov

Kirti Jain

Claudia Igler

Nela Nikolic

Tiago Paixao

Maros Pleska

Anna Nagy-Staron

Nikola Zarevski

Tobias Bergmiller

Moritz Lang

Maria Mateescu

Rok Grah

Tatjana Petrov

Mato Lagator

Remy Chait

Stephanie Kainrath

Isabella Tomanek



119 Publications

2018 | Journal Article | IST-REx-ID: 19 | OA
Nonoptimal gene expression creates latent potential for antibiotic resistance
A. Palmer, R.P. Chait, R. Kishony, Molecular Biology and Evolution 35 (2018) 2669–2684.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2018 | Journal Article | IST-REx-ID: 438 | OA
Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations
N. Nikolic, T. Bergmiller, A. Vandervelde, T. Albanese, L. Gelens, I. Moll, Nucleic Acids Research 46 (2018) 2918–2931.
[Published Version] View | Files available | DOI | WoS
 
2018 | Journal Article | IST-REx-ID: 161 | OA
Statistical mechanics for metabolic networks during steady state growth
D. De Martino, A.A. Mc, T. Bergmiller, C.C. Guet, G. Tkačik, Nature Communications 9 (2018).
[Published Version] View | Files available | DOI | WoS
 
2018 | Thesis | IST-REx-ID: 26 | OA
The influence of sequence context on the evolution of bacterial gene expression
M. Steinrück, The Influence of Sequence Context on the Evolution of Bacterial Gene Expression, Institute of Science and Technology Austria, 2018.
[Published Version] View | Files available | DOI
 
2018 | Journal Article | IST-REx-ID: 67 | OA
Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkačik, J.P. Bollback, C.C. Guet, Nature Ecology and Evolution 2 (2018) 1633–1643.
[Submitted Version] View | Files available | DOI | WoS
 
2017 | Journal Article | IST-REx-ID: 538 | OA
Grünlicht-induzierte Rezeptorinaktivierung durch Cobalamin-bindende Domänen
S. Kainrath, M. Stadler, E. Gschaider-Reichhart, M. Distel, H.L. Janovjak, Angewandte Chemie 129 (2017) 4679–4682.
[Published Version] View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 570 | OA
Regulatory network structure determines patterns of intermolecular epistasis
M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).
[Published Version] View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 613 | OA
Shaping bacterial population behavior through computer interfaced control of individual cells
R.P. Chait, J. Ruess, T. Bergmiller, G. Tkačik, C.C. Guet, Nature Communications 8 (2017).
[Published Version] View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 624 | OA
MazF activation promotes translational heterogeneity of the grcA mRNA in Escherichia coli populations
N. Nikolic, Z. Didara, I. Moll, PeerJ 2017 (2017).
[Published Version] View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 655 | OA
Bacterial flagella grow through an injection diffusion mechanism
T. Renault, A. Abraham, T. Bergmiller, G. Paradis, S. Rainville, E. Charpentier, C.C. Guet, Y. Tu, K. Namba, J. Keener, T. Minamino, M. Erhardt, ELife 6 (2017).
[Published Version] View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 541 | OA
Cell-to-cell variation and specialization in sugar metabolism in clonal bacterial populations
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, PLoS Genetics 13 (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9847 | OA
Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification
M. Pleska, C.C. Guet, (2017).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2017 | Research Data Reference | IST-REx-ID: 9845
Mathematical model
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9849
Modelling and simulation details
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9850
Extensions of the model
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9846
Supplementary methods
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9851
Heuristic prediction for multiple stresses
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9852
Resistance frequencies for different combination strategies
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9844
Source data for figures and tables
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
[Published Version] View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 561 | OA
Effects of mutations in phage restriction sites during escape from restriction–modification
M. Pleska, C.C. Guet, Biology Letters 13 (2017).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

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