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43 Publications

2024 | Published | Journal Article | IST-REx-ID: 17284 | OA
Plasmacytoid dendritic cells control homeostasis of megakaryopoiesis
Gärtner FR, Ishikawa-Ankerhold H, Stutte S, Fu W, Weitz J, Dueck A, Nelakuditi B, Fumagalli V, Van Den Heuvel D, Belz L, Sobirova G, Zhang Z, Titova A, Navarro AM, Pekayvaz K, Lorenz M, Von Baumgarten L, Kranich J, Straub T, Popper B, Zheden V, Kaufmann W, Guo C, Piontek G, Von Stillfried S, Boor P, Colonna M, Clauß S, Schulz C, Brocker T, Walzog B, Scheiermann C, Aird WC, Nerlov C, Stark K, Petzold T, Engelhardt S, Sixt MK, Hauschild R, Rudelius M, Oostendorp RAJ, Iannacone M, Heinig M, Massberg S. 2024. Plasmacytoid dendritic cells control homeostasis of megakaryopoiesis. Nature. 631, 645–653.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 17885 | OA
The novel ribosome biogenesis inhibitor usnic acid blocks nucleolar pre-60S maturation
L. Kofler, L. Grundmann, M. Gerhalter, M. Prattes, J. Merl-Pham, G. Zisser, I. Grishkovskaya, V.-V. Hodirnau, M. Vareka, R. Breinbauer, S.M. Hauck, D. Haselbach, H. Bergler, Nature Communications 15 (2024).
[Published Version] View | Files available | DOI
 
2024 | Published | Journal Article | IST-REx-ID: 14846 | OA
Friction forces determine cytoplasmic reorganization and shape changes of ascidian oocytes upon fertilization
S. Caballero Mancebo, R. Shinde, M. Bolger-Munro, M. Peruzzo, G. Szep, I. Steccari, D. Labrousse Arias, V. Zheden, J. Merrin, A. Callan-Jones, R. Voituriez, C.-P.J. Heisenberg, Nature Physics 20 (2024) 310–321.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 14979 | OA
Multi-modal cryo-EM reveals trimers of protein A10 to form the palisade layer in poxvirus cores
J. Datler, J. Hansen, A. Thader, A. Schlögl, L.W. Bauer, V.-V. Hodirnau, F.K. Schur, Nature Structural & Molecular Biology 31 (2024) 1114–1123.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 15146 | OA
Lift-out cryo-FIBSEM and cryo-ET reveal the ultrastructural landscape of extracellular matrix
B. Zens, F. Fäßler, J. Hansen, R. Hauschild, J. Datler, V.-V. Hodirnau, V. Zheden, J.H. Alanko, M.K. Sixt, F.K. Schur, Journal of Cell Biology 223 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Book Chapter | IST-REx-ID: 18052
Automated Imaging and Analysis of Synapses in Freeze-Fracture Replica Samples with Deep Learning
D. Kleindienst, T. Costanzo, R. Shigemoto, in:, J.H.R. Lübke, A. Rollenhagen (Eds.), New Aspects in Analyzing the Synaptic Organization of the Brain, 1st ed., Springer Nature, New York, 2024, pp. 123–137.
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2024 | Published | Journal Article | IST-REx-ID: 18603 | OA [Published Version] View | Files available | DOI
 
 
2024 | Published | Journal Article | IST-REx-ID: 14843
Developmental transformation of Ca2+ channel-vesicle nanotopography at a central GABAergic synapse
J. Chen, W. Kaufmann, C. Chen, itaru Arai, O. Kim, R. Shigemoto, P.M. Jonas, Neuron 112 (2024) 755–771.e9.
View | Files available | DOI | PubMed | Europe PMC
 
2023 | Published | Conference Abstract | IST-REx-ID: 13161 | OA
Running Windows-applications on a Linux HPC cluster using WINE
A. Schlögl, S. Elefante, V.-V. Hodirnau, in:, ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC, 2023, pp. 59–59.
[Submitted Version] View | Files available
 
2023 | Published | Journal Article | IST-REx-ID: 12334 | OA
ArpC5 isoforms regulate Arp2/3 complex–dependent protrusion through differential Ena/VASP positioning
F. Fäßler, M. Javoor, J. Datler, H. Döring, F. Hofer, G.A. Dimchev, V.-V. Hodirnau, J. Faix, K. Rottner, F.K. Schur, Science Advances 9 (2023).
[Published Version] View | Files available | DOI | WoS
 
2022 | Published | Journal Article | IST-REx-ID: 10766 | OA
Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion in zebrafish germ-layer progenitor cells
J. Slovakova, M.K. Sikora, F.N. Arslan, S. Caballero Mancebo, G. Krens, W. Kaufmann, J. Merrin, C.-P.J. Heisenberg, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
[Published Version] View | Files available | DOI | WoS
 
2022 | Published | Journal Article | IST-REx-ID: 10791 | OA
Tissue-wide effects override cell-intrinsic gene function in radial neuron migration
A.H. Hansen, F. Pauler, M. Riedl, C. Streicher, A.-M. Heger, S. Laukoter, C.M. Sommer, A. Nicolas, B. Hof, L.H. Tsai, T. Rülicke, S. Hippenmeyer, Oxford Open Neuroscience 1 (2022).
[Published Version] View | Files available | DOI
 
2022 | Published | Journal Article | IST-REx-ID: 9794 | OA
Multitier mechanics control stromal adaptations in swelling lymph nodes
F.P. Assen, J. Abe, M. Hons, R. Hauschild, S. Shamipour, W. Kaufmann, T. Costanzo, G. Krens, M. Brown, B. Ludewig, S. Hippenmeyer, C.-P.J. Heisenberg, W. Weninger, E.B. Hannezo, S.A. Luther, J.V. Stein, M.K. Sixt, Nature Immunology 23 (2022) 1246–1255.
[Published Version] View | Files available | DOI | WoS
 
2022 | Published | Journal Article | IST-REx-ID: 10841 | OA
Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components
D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman, W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van Damme, J. Pan, S. Bednarek, Plant Cell 34 (2022) 2150–2173.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC
 
2022 | Published | Journal Article | IST-REx-ID: 11705 | OA
Surface functionalization of surfactant-free particles: A strategy to tailor the properties of nanocomposites for enhanced thermoelectric performance
C. Chang, Y. Liu, S. Lee, M. Spadaro, K.M. Koskela, T. Kleinhanns, T. Costanzo, J. Arbiol, R.L. Brutchey, M. Ibáñez, Angewandte Chemie - International Edition 61 (2022).
[Published Version] View | Files available | DOI | WoS
 
2022 | Published | Journal Article | IST-REx-ID: 12065 | OA
Exclusive solution discharge in Li-O₂ batteries?
C. Prehal, S. Mondal, L. Lovicar, S.A. Freunberger, ACS Energy Letters 7 (2022) 3112–3119.
[Published Version] View | Files available | DOI | WoS
 
2022 | Published | Journal Article | IST-REx-ID: 12239 | OA
Three-dimensional visualization of planta clathrin-coated vesicles at ultrastructural resolution
A.J. Johnson, W. Kaufmann, C.M. Sommer, T. Costanzo, D.A. Dahhan, S.Y. Bednarek, J. Friml, Molecular Plant 15 (2022) 1533–1542.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2022 | Published | Journal Article | IST-REx-ID: 12262 | OA
Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1
M. Prattes, I. Grishkovskaya, V.-V. Hodirnau, C. Hetzmannseder, G. Zisser, C. Sailer, V. Kargas, M. Loibl, M. Gerhalter, L. Kofler, A.J. Warren, F. Stengel, D. Haselbach, H. Bergler, Nature Structural & Molecular Biology 29 (2022) 942–953.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2022 | Published | Journal Article | IST-REx-ID: 12291 | OA
ABP1–TMK auxin perception for global phosphorylation and auxin canalization
Friml J, Gallei MC, Gelová Z, Johnson AJ, Mazur E, Monzer A, Rodriguez Solovey L, Roosjen M, Verstraeten I, Živanović BD, Zou M, Fiedler L, Giannini C, Grones P, Hrtyan M, Kaufmann W, Kuhn A, Narasimhan M, Randuch M, Rýdza N, Takahashi K, Tan S, Teplova A, Kinoshita T, Weijers D, Rakusová H. 2022. ABP1–TMK auxin perception for global phosphorylation and auxin canalization. Nature. 609(7927), 575–581.
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

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