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183 Publications
2014 | Published | Journal Article | IST-REx-ID: 2183 |

Hierarchy and polysynchrony in an adaptive network
V. Botella Soler, P. Glendinning, Physical Review E Statistical Nonlinear and Soft Matter Physics 89 (2014).
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V. Botella Soler, P. Glendinning, Physical Review E Statistical Nonlinear and Soft Matter Physics 89 (2014).
2014 | Published | Journal Article | IST-REx-ID: 1886 |

Variance predicts salience in central sensory processing
A. Hermundstad, J. Briguglio, M. Conte, J. Victor, V. Balasubramanian, G. Tkačik, ELife (2014).
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A. Hermundstad, J. Briguglio, M. Conte, J. Victor, V. Balasubramanian, G. Tkačik, ELife (2014).
2014 | Published | Journal Article | IST-REx-ID: 2257 |

Searching for collective behavior in a large network of sensory neurons
Tkacik, Gasper, Searching for collective behavior in a large network of sensory neurons. PLoS Computational Biology 10 (1). 2014
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Tkacik, Gasper, Searching for collective behavior in a large network of sensory neurons. PLoS Computational Biology 10 (1). 2014
2013 | Published | Journal Article | IST-REx-ID: 2277 |

Transformation of stimulus correlations by the retina
K. Simmons, J. Prentice, G. Tkačik, J. Homann, H. Yee, S. Palmer, P. Nelson, V. Balasubramanian, PLoS Computational Biology 9 (2013).
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K. Simmons, J. Prentice, G. Tkačik, J. Homann, H. Yee, S. Palmer, P. Nelson, V. Balasubramanian, PLoS Computational Biology 9 (2013).
2013 | Published | Journal Article | IST-REx-ID: 2818 |

Learning quadratic receptive fields from neural responses to natural stimuli
K. Rajan, O. Marre, G. Tkačik, Neural Computation 25 (2013) 1661–1692.
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K. Rajan, O. Marre, G. Tkačik, Neural Computation 25 (2013) 1661–1692.
2013 | Published | Journal Article | IST-REx-ID: 2863 |

Stimulus-dependent maximum entropy models of neural population codes
E. Granot Atedgi, G. Tkačik, R. Segev, E. Schneidman, PLoS Computational Biology 9 (2013).
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E. Granot Atedgi, G. Tkačik, R. Segev, E. Schneidman, PLoS Computational Biology 9 (2013).
2013 | Published | Journal Article | IST-REx-ID: 2913 |

Retinal metric: a stimulus distance measure derived from population neural responses
G. Tkačik, E. Granot Atedgi, R. Segev, E. Schneidman, Physical Review Letters 110 (2013).
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G. Tkačik, E. Granot Atedgi, R. Segev, E. Schneidman, Physical Review Letters 110 (2013).
2013 | Published | Journal Article | IST-REx-ID: 2914 |

Statistical thermodynamics of natural images
G. Stephens, T. Mora, G. Tkačik, W. Bialek, Physical Review Letters 110 (2013).
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G. Stephens, T. Mora, G. Tkačik, W. Bialek, Physical Review Letters 110 (2013).
2013 | Published | Journal Article | IST-REx-ID: 499
Dynamic persistence of antibiotic-stressed mycobacteria
Y. Wakamoto, N. Dhar, R.P. Chait, K. Schneider, F. Signorino Gelo, S. Leibler, J. Mckinney, Science 339 (2013) 91–95.
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Y. Wakamoto, N. Dhar, R.P. Chait, K. Schneider, F. Signorino Gelo, S. Leibler, J. Mckinney, Science 339 (2013) 91–95.
2013 | Published | Journal Article | IST-REx-ID: 3261 |

Positional information, in bits
J. Dubuis, G. Tkačik, E. Wieschaus, T. Gregor, W. Bialek, PNAS 110 (2013) 16301–16308.
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J. Dubuis, G. Tkačik, E. Wieschaus, T. Gregor, W. Bialek, PNAS 110 (2013) 16301–16308.
2013 | Published | Journal Article | IST-REx-ID: 2850 |

The simplest maximum entropy model for collective behavior in a neural network
G. Tkačik, O. Marre, T. Mora, D. Amodei, M. Berry, W. Bialek, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
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G. Tkačik, O. Marre, T. Mora, D. Amodei, M. Berry, W. Bialek, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
2013 | Published | Journal Article | IST-REx-ID: 2851
A simple method for estimating the entropy of neural activity
M. Berry, G. Tkačik, J. Dubuis, O. Marre, R. Da Silveira, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
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M. Berry, G. Tkačik, J. Dubuis, O. Marre, R. Da Silveira, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
2013 | Published | Journal Article | IST-REx-ID: 2861
Lyapunov exponent and topological entropy plateaus in piecewise linear maps
Botella Soler, Vicente, Lyapunov exponent and topological entropy plateaus in piecewise linear maps. Journal of Physics A: Mathematical and Theoretical 46 (12). 2013
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Botella Soler, Vicente, Lyapunov exponent and topological entropy plateaus in piecewise linear maps. Journal of Physics A: Mathematical and Theoretical 46 (12). 2013
2013 | Published | Book Chapter | IST-REx-ID: 2413
Neuronal oscillations scale up and scale down the brain dynamics
Valderrama, Mario, Neuronal oscillations scale up and scale down the brain dynamics . Multiscale Analysis and Nonlinear Dynamics: From Genes to the Brain. 2013
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Valderrama, Mario, Neuronal oscillations scale up and scale down the brain dynamics . Multiscale Analysis and Nonlinear Dynamics: From Genes to the Brain. 2013
2012 | Published | Journal Article | IST-REx-ID: 3262 |

Optimizing information flow in small genetic networks. III. A self-interacting gene
G. Tkačik, A. Walczak, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 85 (2012).
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G. Tkačik, A. Walczak, W. Bialek, Physical Review E Statistical Nonlinear and Soft Matter Physics 85 (2012).
2012 | Published | Journal Article | IST-REx-ID: 3274
A 2.5D-Fourier-BEM model for vibrations in a tunnel running through layered anisotropic soil
G. Rieckh, W. Kreuzer, H. Waubke, P. Balazs, Engineering Analysis with Boundary Elements 36 (2012) 960–967.
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G. Rieckh, W. Kreuzer, H. Waubke, P. Balazs, Engineering Analysis with Boundary Elements 36 (2012) 960–967.
2011 | Published | Journal Article | IST-REx-ID: 3384 |

Natural images from the birthplace of the human eye
G. Tkačik, P. Garrigan, C. Ratliff, G. Milcinski, J. Klein, L. Seyfarth, P. Sterling, D. Brainard, V. Balasubramanian, PLoS One 6 (2011).
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G. Tkačik, P. Garrigan, C. Ratliff, G. Milcinski, J. Klein, L. Seyfarth, P. Sterling, D. Brainard, V. Balasubramanian, PLoS One 6 (2011).
2011 | Published | Journal Article | IST-REx-ID: 3374 |

Information transmission in genetic regulatory networks a review
Tkacik, Gasper, Information transmission in genetic regulatory networks a review. Journal of Physics: Condensed Matter 23 (15). 2011
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Tkacik, Gasper, Information transmission in genetic regulatory networks a review. Journal of Physics: Condensed Matter 23 (15). 2011