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4995 Publications

2024 | Book Chapter | IST-REx-ID: 15361
Protein-Protein Interactions Visualized by Bimolecular Fluorescence Complementation in Arabidopsis thaliana Protoplasts from Leaf
A. Jayasree, H. Salava, T. Nodzynski, T. Sravankumar, in:, F. Maghuly (Ed.), Plant Functional Genomics, Springer Nature, 2024, pp. 305–313.
View | DOI | PubMed | Europe PMC
 
2024 | Journal Article | IST-REx-ID: 15362 | OA
Discovery of recessive effect of human polymerase δ proofreading deficiency through mutational analysis of POLD1-mutated normal and cancer cells
M.A. Andrianova, V.B. Seplyarskiy, M. Terradas, A.B. Sánchez-Heras, P. Mur, J.L. Soto, G. Aiza, E. Borràs, F. Kondrashov, A.S. Kondrashov, G.A. Bazykin, L. Valle, European Journal of Human Genetics (2024).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2024 | Journal Article | IST-REx-ID: 15367 | OA
Proximity-induced gapless superconductivity in two-dimensional Rashba semiconductor in magnetic field
S. Babkin, A.P. Higginbotham, M. Serbyn, SciPost Physics 16 (2024).
[Published Version] View | Files available | DOI | arXiv
 
2024 | Journal Article | IST-REx-ID: 15359 | OA
Molecular dynamics simulations of heat transport using machine-learned potentials: A mini-review and tutorial on GPUMD with neuroevolution potentials
H. Dong, Y. Shi, P. Ying, K. Xu, T. Liang, Y. Wang, Z. Zeng, X. Wu, W. Zhou, S. Xiong, S. Chen, Z. Fan, Journal of Applied Physics 135 (2024).
[Preprint] View | Files available | DOI | arXiv
 
2024 | Journal Article | IST-REx-ID: 15356
Identifying Pd9OX as the optimum catalyst for the direct synthesis of H2O2 through microkinetic modeling with coverage effects
J. Zhao, Z. Yao, R. Bunting, Y. Wang, J. Wang, Chemical Engineering Science 295 (2024).
View | DOI
 
2024 | Journal Article | IST-REx-ID: 15358 | OA
Limits to selection on standing variation in an asexual population
N.H. Barton, H. Sachdeva, Theoretical Population Biology 157 (2024) 129–137.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Journal Article | IST-REx-ID: 15374 | OA
SH3Ps recruit auxilin-like vesicle uncoating factors for clathrin-mediated endocytosis
M. Adamowski, M. Randuch, I. Matijevic, M. Narasimhan, J. Friml, Cell Reports 43 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Journal Article | IST-REx-ID: 15357 | OA
Enhancing thermoelectric performance of solutionpProcessed polycrystalline SnSe with PbSe nanocrystals
Y. Liu, S. Lee, C. Fiedler, M.C. Spadaro, C. Chang, M. Li, M. Hong, J. Arbiol, M. Ibáñez, Chemical Engineering Journal 490 (2024).
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2024 | Journal Article | IST-REx-ID: 15372 | OA
Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9
G.N. Hibshman, J.P.K. Bravo, M.M. Hooper, T.L. Dangerfield, H. Zhang, I.J. Finkelstein, K.A. Johnson, D.W. Taylor, Nature Communications 15 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Journal Article | IST-REx-ID: 15381 | OA
Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning
D.K. Rangel Guerrero, K. Balueva, U. Barayeu, P. Baracskay, I. Gridchyn, M. Nardin, C.N. Roth, P. Wulff, J.L. Csicsvari, Neuron (2024).
[Published Version] View | DOI | Download Published Version (ext.)
 
2024 | Journal Article | IST-REx-ID: 15375 | OA
Linker histone H1 drives heterochromatin condensation via phase separation in Arabidopsis
S. He, Y. Yu, L. Wang, J. Zhang, Z. Bai, G. Li, P. Li, X. Feng, The Plant Cell 36 (2024) 1829–1843.
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2024 | Journal Article | IST-REx-ID: 15378 | OA
Wegner estimate and upper bound on the eigenvalue condition number of non-Hermitian random matrices
L. Erdös, H.C. Ji, Communications on Pure and Applied Mathematics (2024).
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 
2024 | Journal Article | IST-REx-ID: 15379 | OA
Tuning synaptic strength by regulation of AMPA glutamate receptor localization
I. Stockwell, J. Watson, I.H. Greger, BioEssays (2024).
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2024 | Journal Article | IST-REx-ID: 15373 | OA
Christensen–Evans theorem and extensions of GNS-symmetric quantum Markov semigroups
M. Wirth, Journal of Functional Analysis 287 (2024).
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2024 | Journal Article | IST-REx-ID: 15380 | OA
Depth in arrangements: Dehn–Sommerville–Euler relations with applications
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Journal of Applied and Computational Topology (2024).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2024 | Thesis | IST-REx-ID: 15101 | OA
Developmental transformation of nanodomain coupling between Ca2+ channels and release sensors at a central GABAergic synapse
J. Chen, Developmental Transformation of Nanodomain Coupling between Ca2+ Channels and Release Sensors at a Central GABAergic Synapse, Institute of Science and Technology Austria, 2024.
[Published Version] View | Files available | DOI
 
2024 | Journal Article | IST-REx-ID: 14843
Developmental transformation of Ca2+ channel-vesicle nanotopography at a central GABAergic synapse
J. Chen, W. Kaufmann, C. Chen, itaru Arai, O. Kim, R. Shigemoto, P.M. Jonas, Neuron (n.d.).
View | Files available | DOI | PubMed | Europe PMC
 
2024 | Thesis | IST-REx-ID: 15352
Investigating acute microglia response to seizure activity in vivo: Combining 2-Photon imaging and EEG recording
J.S. Murmann, Investigating Acute Microglia Response to Seizure Activity in Vivo: Combining 2-Photon Imaging and EEG Recording, Institute of Science and Technology Austria, 2024.
[Published Version] View | Files available | DOI
 
2023 | Book Chapter | IST-REx-ID: 12428 | OA
A Guide Toward Multi-scale and Quantitative Branching Analysis in the Mammary Gland
E.B. Hannezo, C.L.G.J. Scheele, in:, C. Margadant (Ed.), Cell Migration in Three Dimensions, Springer Nature, 2023, pp. 183–205.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2023 | Journal Article | IST-REx-ID: 12534 | OA
Dissipative dynamics of an impurity with spin-orbit coupling
A. Ghazaryan, A. Cappellaro, M. Lemeshko, A. Volosniev, Physical Review Research 5 (2023).
[Published Version] View | Files available | DOI
 
2023 | Journal Article | IST-REx-ID: 12158 | OA
Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis
P. Zeller, J. Yeung, H. Viñas Gaza, B.A. de Barbanson, V. Bhardwaj, M. Florescu, R. van der Linden, A. van Oudenaarden, Nature Genetics 55 (2023) 333–345.
[Published Version] View | Files available | DOI
 
2023 | Conference Paper | IST-REx-ID: 12676 | OA
Faster algorithm for turn-based stochastic games with bounded treewidth
K. Chatterjee, T. Meggendorfer, R.J. Saona Urmeneta, J. Svoboda, in:, Proceedings of the 2023 Annual ACM-SIAM Symposium on Discrete Algorithms, Society for Industrial and Applied Mathematics, 2023, pp. 4590–4605.
[Published Version] View | DOI | Download Published Version (ext.)
 
2023 | Book Chapter | IST-REx-ID: 12720
Molecular Cloning Using In Vivo DNA Assembly
S. Arroyo-Urea, J. Watson, J. García-Nafría, in:, G. Scarlett (Ed.), DNA Manipulation and Analysis, Springer Nature, New York, NY, United States, 2023, pp. 33–44.
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2023 | Conference Paper | IST-REx-ID: 12735 | OA
Fast and scalable channels in Kotlin Coroutines
N. Koval, D.-A. Alistarh, R. Elizarov, in:, Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, Association for Computing Machinery, 2023, pp. 107–118.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2023 | Conference Poster | IST-REx-ID: 12736 | OA
Unexpected scaling in path copying trees
V. Aksenov, T.A. Brown, A. Fedorov, I. Kokorin, Unexpected Scaling in Path Copying Trees, Association for Computing Machinery, 2023.
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2023 | Conference Paper | IST-REx-ID: 12760 | OA
Dynamic maintenance of monotone dynamic programs and applications
M.H. Henzinger, S. Neumann, H. Räcke, S. Schmid, in:, 40th International Symposium on Theoretical Aspects of Computer Science, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2023.
[Published Version] View | Files available | DOI | arXiv
 
2023 | Thesis | IST-REx-ID: 12716 | OA
To flee, or not to flee? Using innate defensive behaviours to investigate rapid perceptual decision-making through subcortical circuits in mouse models of autism
L. Burnett, To Flee, or Not to Flee? Using Innate Defensive Behaviours to Investigate Rapid Perceptual Decision-Making through Subcortical Circuits in Mouse Models of Autism, Institute of Science and Technology Austria, 2023.
[Published Version] View | Files available | DOI
 
2023 | Conference Paper | IST-REx-ID: 12854 | OA
Bubaak: Runtime monitoring of program verifiers
M. Chalupa, T.A. Henzinger, in:, Tools and Algorithms for the Construction and Analysis of Systems, Springer Nature, 2023, pp. 535–540.
[Published Version] View | Files available | DOI
 
2023 | Preprint | IST-REx-ID: 12846 | OA
Area formula for spherical polygons via prequantization
A. Chern, S. Ishida, ArXiv (n.d.).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2023 | Conference Paper | IST-REx-ID: 12856 | OA
Vamos: Middleware for best-effort third-party monitoring
M. Chalupa, F. Mühlböck, S. Muroya Lei, T.A. Henzinger, in:, Fundamental Approaches to Software Engineering, Springer Nature, 2023, pp. 260–281.
[Published Version] View | Files available | DOI
 
2023 | Technical Report | IST-REx-ID: 12407 | OA
VAMOS: Middleware for Best-Effort Third-Party Monitoring
M. Chalupa, F. Mühlböck, S. Muroya Lei, T.A. Henzinger, VAMOS: Middleware for Best-Effort Third-Party Monitoring, Institute of Science and Technology Austria, 2023.
[Published Version] View | Files available | DOI
 
2023 | Book Chapter | IST-REx-ID: 12866
Altered childhood brain development in autism and epilepsy
C. Currin, C. Beyer, in:, B. Halpern-Felsher (Ed.), Encyclopedia of Child and Adolescent Health, 1st ed., Elsevier, 2023, pp. 86–98.
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2023 | Journal Article | IST-REx-ID: 12668 | OA
Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat
L. Zhao, Y. Yang, J. Chen, X. Lin, H. Zhang, H. Wang, H. Wang, X. Bie, J. Jiang, X. Feng, X. Fu, X. Zhang, Z. Du, J. Xiao, Genome Biology 24 (2023).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2023 | Conference Paper | IST-REx-ID: 13048 | OA
Hausdorff and Gromov-Hausdorff stable subsets of the medial axis
A. Lieutier, M. Wintraecken, in:, Proceedings of the 55th Annual ACM Symposium on Theory of Computing, Association for Computing Machinery, 2023, pp. 1768–1776.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2023 | Conference Paper | IST-REx-ID: 13053 | OA
CrAM: A Compression-Aware Minimizer
E.-A. Peste, A. Vladu, E. Kurtic, C. Lampert, D.-A. Alistarh, in:, 11th International Conference on Learning Representations , n.d.
[Preprint] View | Files available | Download Preprint (ext.) | arXiv
 
2023 | Conference Paper | IST-REx-ID: 13143 | OA
Certifying giant nonprimes
C. Hoffmann, P. Hubáček, C. Kamath, K.Z. Pietrzak, in:, Public-Key Cryptography - PKC 2023, Springer Nature, 2023, pp. 530–553.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
2023 | Conference Paper | IST-REx-ID: 13142 | OA
A learner-verifier framework for neural network controllers and certificates of stochastic systems
K. Chatterjee, T.A. Henzinger, M. Lechner, D. Zikelic, in:, Tools and Algorithms for the Construction and Analysis of Systems , Springer Nature, 2023, pp. 3–25.
[Published Version] View | Files available | DOI
 
2023 | Conference Paper | IST-REx-ID: 13141 | OA
Computing adequately permissive assumptions for synthesis
A. Anand, K. Mallik, S.P. Nayak, A.K. Schmuck, in:, TACAS 2023: Tools and Algorithms for the Construction and Analysis of Systems, Springer Nature, 2023, pp. 211–228.
[Published Version] View | Files available | DOI
 
2023 | Thesis | IST-REx-ID: 12826 | OA
Neural control of optic flow-based navigation in Drosophila melanogaster
V. Pokusaeva, Neural Control of Optic Flow-Based Navigation in Drosophila Melanogaster, Institute of Science and Technology Austria, 2023.
[Published Version] View | Files available | DOI
 
2023 | Journal Article | IST-REx-ID: 12086 | OA
A simple algorithm for higher-order Delaunay mosaics and alpha shapes
H. Edelsbrunner, G.F. Osang, Algorithmica 85 (2023) 277–295.
[Published Version] View | Files available | DOI | WoS
 
2023 | Journal Article | IST-REx-ID: 12104 | OA
Ergodic decompositions of Dirichlet forms under order isomorphisms
L. Dello Schiavo, M. Wirth, Journal of Evolution Equations 23 (2023).
[Published Version] View | Files available | DOI | WoS
 
2023 | Journal Article | IST-REx-ID: 11434
Role of the eastern equatorial Indian Ocean warming in the Indian summer monsoon rainfall trend
B.B. GOSWAMI, Climate Dynamics 60 (2023) 427–442.
View | Files available | DOI | WoS
 
2023 | Conference Paper | IST-REx-ID: 12467 | OA
Quantitative safety and liveness
T.A. Henzinger, N.A. Mazzocchi, N.E. Sarac, in:, 26th International Conference Foundations of Software Science and Computation Structures, Springer Nature, 2023, pp. 349–370.
[Published Version] View | Files available | DOI | arXiv
 
2023 | Journal Article | IST-REx-ID: 13179 | OA
CQS: A formally-verified framework for fair and abortable synchronization
N. Koval, D. Khalanskiy, D.-A. Alistarh, Proceedings of the ACM on Programming Languages 7 (2023).
[Published Version] View | Files available | DOI
 
2023 | Journal Article | IST-REx-ID: 13180 | OA
Local solubility for a family of quadrics over a split quadric surface
T.D. Browning, J. Lyczak, R. Sarapin, Involve 16 (2023) 331–342.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2023 | Conference Abstract | IST-REx-ID: 13162 | OA
Cryo-EM software packages: A sys-admins point of view
S. Elefante, S. Stadlbauer, M.F. Alexander, A. Schlögl, in:, ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC, n.d., pp. 42–42.
[Submitted Version] View | Files available
 
2023 | Conference Abstract | IST-REx-ID: 13161 | OA
Running Windows-applications on a Linux HPC cluster using WINE
A. Schlögl, S. Elefante, V.-V. Hodirnau, in:, ASHPC23 - Austrian-Slovenian HPC Meeting 2023, EuroCC, n.d., pp. 59–59.
[Submitted Version] View | Files available
 
2023 | Journal Article | IST-REx-ID: 13251 | OA
Bond polarizability as a probe of local crystal fields in hybrid lead-halide perovskites
Y. Wei, A. Volosniev, D. Lorenc, A.A. Zhumekenov, O.M. Bakr, M. Lemeshko, Z. Alpichshev, The Journal of Physical Chemistry Letters 14 (2023) 6309–6314.
[Published Version] View | Files available | DOI | WoS | arXiv
 
2023 | Conference Paper | IST-REx-ID: 13292 | OA
Regular methods for operator precedence languages
T.A. Henzinger, P. Kebis, N.A. Mazzocchi, N.E. Sarac, in:, 50th International Colloquium on Automata, Languages, and Programming, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2023, p. 129:1--129:20.
[Published Version] View | Files available | DOI | arXiv
 
2023 | Journal Article | IST-REx-ID: 13277 | OA
Stochastic representation of the quantum quartic oscillator
G. Tucci, S. De Nicola, S. Wald, A. Gambassi, SciPost Physics Core 6 (2023).
[Published Version] View | Files available | DOI | arXiv
 

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