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4969 Publications

2014 | Conference Paper | IST-REx-ID: 10885
Doomsday equilibria for omega-regular games
K. Chatterjee, L. Doyen, E. Filiot, J.-F. Raskin, in:, VMCAI 2014: Verification, Model Checking, and Abstract Interpretation, Springer Nature, 2014, pp. 78–97.
[Preprint] View | Files available | DOI | arXiv
 
2014 | Book | IST-REx-ID: 6853
A Short Course in Computational Geometry and Topology
H. Edelsbrunner, A Short Course in Computational Geometry and Topology, 1st ed., Springer Nature, Cham, 2014.
View | Files available | DOI
 
2014 | Working Paper | IST-REx-ID: 7038 | OA
Playful Math - An introduction to mathematical games
K. Huszár, M. Rolinek, Playful Math - An Introduction to Mathematical Games, IST Austria, n.d.
[Published Version] View | Files available
 
2014 | Journal Article | IST-REx-ID: 9519
DNA methylation as a system of plant genomic immunity
M.Y. Kim, D. Zilberman, Trends in Plant Science 19 (2014) 320–326.
View | DOI | PubMed | Europe PMC
 
2014 | Journal Article | IST-REx-ID: 2083 | OA
Role of sex and migration in adaptation to sink environments
M. Lagator, A. Morgan, P. Neve, N. Colegrave, Evolution 68 (2014) 2296–2305.
[Published Version] View | Files available | DOI
 
2014 | Research Data Reference | IST-REx-ID: 9747 | OA
Data from: Role of sex and migration in adaptation to sink environments
M. Lagator, A. Morgan, P. Neve, N. Colegrave, (2014).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2014 | Journal Article | IST-REx-ID: 2086 | OA
So near and yet so far: Harmonic radar reveals reduced homing ability of Nosema infected honeybees
S. Wolf, D. Mcmahon, K. Lim, C. Pull, S. Clark, R. Paxton, J. Osborne, PLoS One 9 (2014).
[Published Version] View | Files available | DOI
 
2014 | Research Data Reference | IST-REx-ID: 9888
Supporting information
S. Wolf, D. Mcmahon, K. Lim, C. Pull, S. Clark, R. Paxton, J. Osborne, (2014).
[Published Version] View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 9458 | OA
Dnmt1-independent CG methylation contributes to nucleosome positioning in diverse eukaryotes
J.T. Huff, D. Zilberman, Cell 156 (2014) 1286–1297.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2014 | Journal Article | IST-REx-ID: 9479 | OA
The AAA-ATPase molecular chaperone Cdc48/p97 disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes
Z. Mérai, N. Chumak, M. García-Aguilar, T.-F. Hsieh, T. Nishimura, V.K. Schoft, J. Bindics, L. Ślusarz, S. Arnoux, S. Opravil, K. Mechtler, D. Zilberman, R.L. Fischer, H. Tamaru, Proceedings of the National Academy of Sciences 111 (2014) 16166–16171.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2014 | Journal Article | IST-REx-ID: 2004 | OA
Boolean modelling reveals new regulatory connections between transcription factors orchestrating the development of the ventral spinal cord
A. Lovrics, Y. Gao, B. Juhász, I. Bock, H. Byrne, A. Dinnyés, K. Kovács, PLoS One 9 (2014).
[Published Version] View | Files available | DOI
 
2014 | Research Data Reference | IST-REx-ID: 9722
Transition probability between TF expression states when Dbx2 inhibits Nkx2.2
A. Lovrics, Y. Gao, B. Juhász, I. Bock, H.M. Byrne, A. Dinnyés, K. Kovács, (2014).
[Published Version] View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 2039 | OA
The time scale of evolutionary innovation
K. Chatterjee, A. Pavlogiannis, B. Adlam, M. Nowak, PLoS Computational Biology 10 (2014).
[Published Version] View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 2161
Increased grooming after repeated brood care provides sanitary benefits in a clonal ant
C. Westhus, L.V. Ugelvig, E. Tourdot, J. Heinze, C. Doums, S. Cremer, Behavioral Ecology and Sociobiology 68 (2014) 1701–1710.
View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 2036 | OA
Selection history and epistatic interactions impact dynamics of adaptation to novel environmental stresses
M. Lagator, N. Colegrave, P. Neve, Proceedings of the Royal Society of London Series B Biological Sciences 281 (2014).
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)
 
2014 | Research Data Reference | IST-REx-ID: 9740 | OA
Data from: Anti-pathogen protection versus survival costs mediated by an ectosymbiont in an ant host
M. Konrad, A.V. Grasse, S. Tragust, S. Cremer, (2014).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2014 | Research Data Reference | IST-REx-ID: 9741 | OA
Data from: Selection history and epistatic interactions impact dynamics of adaptation to novel environmental stresses
M. Lagator, N. Colegrave, P. Neve, (2014).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2014 | Research Data Reference | IST-REx-ID: 9739
Detailed proofs for “The time scale of evolutionary innovation”
K. Chatterjee, A. Pavlogiannis, B. Adlam, M. Novak, (2014).
[Published Version] View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 2170 | OA
Likelihood-based inference of population history from low-coverage de novo genome assemblies
J. Hearn, G. Stone, L. Bunnefeld, J. Nicholls, N.H. Barton, K. Lohse, Molecular Ecology 23 (2014) 198–211.
[Submitted Version] View | Files available | DOI
 
2014 | Research Data Reference | IST-REx-ID: 9753 | OA
Data from: Pupal cocoons affect sanitary brood care and limit fungal infections in ant colonies
S. Tragust, L.V. Ugelvig, M. Chapuisat, J. Heinze, S. Cremer, (2014).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2014 | Research Data Reference | IST-REx-ID: 9752 | OA
Data from: Transformation of stimulus correlations by the retina
K. Simmons, J. Prentice, G. Tkačik, J. Homann, H. Yee, S. Palmer, P. Nelson, V. Balasubramanian, (2014).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2014 | Journal Article | IST-REx-ID: 9931
Increased gene dosage plays a predominant role in the initial stages of evolution of duplicate TEM-1 beta lactamase genes
R. Dhar, T. Bergmiller, A. Wagner, Evolution 68 (2014) 1775–1791.
View | Files available | DOI | PubMed | Europe PMC
 
2014 | Research Data Reference | IST-REx-ID: 9932 | OA
Data from: Increased gene dosage plays a predominant role in the initial stages of evolution of duplicate TEM-1 beta lactamase genes
R. Dhar, T. Bergmiller, A. Wagner, (2014).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2014 | Journal Article | IST-REx-ID: 535 | OA
Polynomial-time algorithms for energy games with special weight structures
K. Chatterjee, M.H. Henzinger, S. Krinninger, D. Nanongkai, Algorithmica 70 (2014) 457–492.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2014 | Conference Paper | IST-REx-ID: 10886
Visualization of two-dimensional symmetric positive definite tensor fields using the heat kernel signature
V. Zobel, J. Reininghaus, I. Hotz, in:, Topological Methods in Data Analysis and Visualization III , Springer, 2014, pp. 249–262.
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2014 | Book Chapter | IST-REx-ID: 6178
UV laser ablation to measure cell and tissue-generated forces in the zebrafish embryo in vivo and ex vivo
M. Smutny, M. Behrndt, P. Campinho, V. Ruprecht, C.-P.J. Heisenberg, in:, C. Nelson (Ed.), Tissue Morphogenesis, Springer, New York, NY, 2014, pp. 219–235.
View | DOI | PubMed | Europe PMC
 
2014 | Journal Article | IST-REx-ID: 10814
The excitation spectrum for Bose fluids with weak interactions
R. Seiringer, Jahresbericht Der Deutschen Mathematiker-Vereinigung 116 (2014) 21–41.
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2014 | Book Chapter | IST-REx-ID: 10817
Notes on the simplification of the Morse-Smale complex
D. Günther, J. Reininghaus, H.-P. Seidel, T. Weinkauf, in:, P.-T. Bremer, I. Hotz, V. Pascucci, R. Peikert (Eds.), Topological Methods in Data Analysis and Visualization III., Springer Nature, Cham, 2014, pp. 135–150.
View | DOI
 
2014 | Thesis | IST-REx-ID: 1395
Immune defences in ants: Effects of social immunisation and a fungal ectosymbiont in the ant Lasius neglectus
M. Konrad, Immune Defences in Ants: Effects of Social Immunisation and a Fungal Ectosymbiont in the Ant Lasius Neglectus, Institute of Science and Technology Austria, 2014.
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2014 | Thesis | IST-REx-ID: 1402
Molecular mechanisms of patterning and subcellular trafficking in Arabidopsis thaliana
P. Marhavá, Molecular Mechanisms of Patterning and Subcellular Trafficking in Arabidopsis Thaliana, Institute of Science and Technology Austria, 2014.
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2014 | Journal Article | IST-REx-ID: 2255 | OA
Stable length estimates of tube-like shapes
H. Edelsbrunner, F. Pausinger, Journal of Mathematical Imaging and Vision 50 (2014) 164–177.
[Submitted Version] View | Files available | DOI
 
2014 | Conference Paper | IST-REx-ID: 2159 | OA
Eliminating Tverberg points, I. An analogue of the Whitney trick
I. Mabillard, U. Wagner, in:, Proceedings of the Annual Symposium on Computational Geometry, ACM, 2014, pp. 171–180.
[Submitted Version] View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 2023 | OA
Habitat heterogeneities versus spatial type frequency variances as driving forces of dispersal evolution
S. Novak, Ecology and Evolution 4 (2014) 4589–4597.
[Published Version] View | Files available | DOI
 
2014 | Conference Paper | IST-REx-ID: 2218 | OA
Regression-free synthesis for concurrency
P. Cerny, T.A. Henzinger, A. Radhakrishna, L. Ryzhyk, T. Tarrach, in:, Springer, 2014, pp. 568–584.
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)
 
2014 | Conference Paper | IST-REx-ID: 2167 | OA
Compositional specifications for IOCO testing
P. Daca, T.A. Henzinger, W. Krenn, D. Nickovic, in:, IEEE 7th International Conference on Software Testing, Verification and Validation, IEEE, 2014.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2014 | Conference Paper | IST-REx-ID: 2063
CEGAR for qualitative analysis of probabilistic systems
K. Chatterjee, M. Chmelik, P. Daca, in:, Springer, 2014, pp. 473–490.
View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 2001
Bacterial responses to antibiotics and their combinations
K. Mitosch, M.T. Bollenbach, Environmental Microbiology Reports 6 (2014) 545–557.
View | Files available | DOI
 
2014 | Conference Paper | IST-REx-ID: 2082 | OA
The exact PRF-security of NMAC and HMAC
P. Gazi, K.Z. Pietrzak, M. Rybar, in:, J. Garay, R. Gennaro (Eds.), Springer, 2014, pp. 113–130.
[Submitted Version] View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 1912 | OA
The notochord breaks bilateral symmetry by controlling cell shapes in the Zebrafish laterality organ
J. Compagnon, V. Barone, S. Rajshekar, R. Kottmeier, K. Pranjic-Ferscha, M. Behrndt, C.-P.J. Heisenberg, Developmental Cell 31 (2014) 774–783.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2014 | Journal Article | IST-REx-ID: 2084 | OA
Spatio-temporally precise activation of engineered receptor tyrosine kinases by light
M. Grusch, K. Schelch, R. Riedler, E. Gschaider-Reichhart, C. Differ, W. Berger, Á. Inglés Prieto, H.L. Janovjak, EMBO Journal 33 (2014) 1713–1726.
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)
 
2014 | Conference Paper | IST-REx-ID: 2157 | OA
Embeddability in the 3 sphere is decidable
J. Matoušek, E. Sedgwick, M. Tancer, U. Wagner, in:, Proceedings of the Annual Symposium on Computational Geometry, ACM, 2014, pp. 78–84.
[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)
 
2014 | Conference Paper | IST-REx-ID: 10894
PHAT – Persistent Homology Algorithms Toolbox
U. Bauer, M. Kerber, J. Reininghaus, H. Wagner, in:, ICMS 2014: International Congress on Mathematical Software, Springer Berlin Heidelberg, Berlin, Heidelberg, 2014, pp. 137–143.
View | Files available | DOI
 
2014 | Technical Report | IST-REx-ID: 5428 | OA
Quantitative fair simulation games
K. Chatterjee, T.A. Henzinger, J. Otop, Y. Velner, Quantitative Fair Simulation Games, IST Austria, 2014.
[Published Version] View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 1887 | OA
Gemeinsame Krankheitsabwehr in Ameisengesellschaften
S. Cremer, Zoologie (2014) 23–30.
[Published Version] View | Download Published Version (ext.)
 
2014 | Journal Article | IST-REx-ID: 2175 | OA
Monitoring neurogenesis in the cerebral cortex: an update
M.P. Postiglione, S. Hippenmeyer, Future Neurology 9 (2014) 323–340.
[Published Version] View | Files available | DOI
 
2014 | Journal Article | IST-REx-ID: 1913 | OA
Patterns of hippocampal tau pathology differentiate neurodegenerative dementias
I. Milenković, T. Petrov, G. Kovács, Dementia and Geriatric Cognitive Disorders 38 (2014) 375–388.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2014 | Conference Paper | IST-REx-ID: 1507 | OA
Random matrices, log-gases and Hölder regularity
L. Erdös, in:, Proceedings of the International Congress of Mathematicians, International Congress of Mathematicians, 2014, pp. 214–236.
[Submitted Version] View | Download Submitted Version (ext.)
 
2014 | Conference Paper | IST-REx-ID: 8044 | OA
Structure of the excitation spectrum for many-body quantum systems
R. Seiringer, in:, Proceeding of the International Congress of Mathematicans, International Congress of Mathematicians, 2014, pp. 1175–1194.
[Published Version] View | Download Published Version (ext.)
 
2014 | Conference Paper | IST-REx-ID: 2160 | OA
A PAC-Bayesian bound for Lifelong Learning
A. Pentina, C. Lampert, in:, ML Research Press, 2014, pp. 991–999.
[Submitted Version] View | Download Submitted Version (ext.)
 
2014 | Thesis | IST-REx-ID: 1403
Forces driving epithelial spreading in zebrafish epiboly
M. Behrndt, Forces Driving Epithelial Spreading in Zebrafish Epiboly, IST Austria, 2014.
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