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4969 Publications

2010 | Book Chapter | IST-REx-ID: 4392
P. Cerny, T. A. Henzinger, and A. Radhakrishna, “Quantitative Simulation Games,” in Time For Verification: Essays in Memory of Amir Pnueli, vol. 6200, Z. Manna and D. Peled, Eds. Springer, 2010, pp. 42–60.
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2010 | Conference Paper | IST-REx-ID: 4396 | OA
D. Beyer, T. A. Henzinger, G. Théoduloz, and D. Zufferey, “Shape refinement through explicit heap analysis,” presented at the FASE: Fundamental Approaches To Software Engineering, Paphos, Cyprus, 2010, vol. 6013, pp. 263–277.
[Submitted Version] View | Files available | DOI
 
2010 | Journal Article | IST-REx-ID: 3867 | OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Expressiveness and closure properties for quantitative languages,” Logical Methods in Computer Science, vol. 6, no. 3. International Federation of Computational Logic, pp. 1–23, 2010.
[Published Version] View | Files available | DOI
 
2010 | Journal Article | IST-REx-ID: 474
N. H. Barton, J. Kelleher, and A. Etheridge, “A new model for extinction and recolonization in two dimensions: Quantifying phylogeography,” Evolution, vol. 64, no. 9. Wiley-Blackwell, pp. 2701–2715, 2010.
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2010 | Conference Paper | IST-REx-ID: 488 | OA
R. Alur and P. Cerny, “Expressiveness of streaming string transducers,” presented at the FSTTCS: Foundations of Software Technology and Theoretical Computer Science, Chennai, India, 2010, vol. 8, pp. 1–12.
[Published Version] View | Files available | DOI
 
2010 | Conference Paper | IST-REx-ID: 489 | OA
J. Cristau, C. David, and F. Horn, “How do we remember the past in randomised strategies? ,” in Proceedings of GandALF 2010, Minori, Amalfi Coast, Italy, 2010, vol. 25, pp. 30–39.
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2010 | Journal Article | IST-REx-ID: 533
J. Hoenicke, K. Leino, A. Podelski, M. Schäf, and T. Wies, “Doomed program points,” Formal Methods in System Design, vol. 37, no. 2–3. Springer, pp. 171–199, 2010.
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2010 | Conference Paper | IST-REx-ID: 4393 | OA
P. Cerny, T. A. Henzinger, and A. Radhakrishna, “Simulation distances,” presented at the CONCUR: Concurrency Theory, Paris, France, 2010, vol. 6269, pp. 235–268.
[Submitted Version] View | Files available | DOI
 
2010 | Technical Report | IST-REx-ID: 5388 | OA
K. Chatterjee, P. Cerny, T. A. Henzinger, A. Radhakrishna, and R. Singh, Quantitative synthesis for concurrent programs. IST Austria, 2010.
[Published Version] View | Files available | DOI
 
2010 | Technical Report | IST-REx-ID: 5389 | OA
P. Cerny, T. A. Henzinger, and A. Radhakrishna, Simulation distances. IST Austria, 2010.
[Published Version] View | Files available | DOI
 
2010 | Conference Paper | IST-REx-ID: 4390 | OA
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, “Model checking of linearizability of concurrent list implementations,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 465–479.
[Submitted Version] View | Files available | DOI
 
2010 | Conference Paper | IST-REx-ID: 4388 | OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, “GIST: A solver for probabilistic games,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 665–669.
[Submitted Version] View | Files available | DOI | arXiv
 
2010 | Technical Report | IST-REx-ID: 5391 | OA
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, Model checking of linearizability of concurrent list implementations. IST Austria, 2010.
[Published Version] View | Files available | DOI
 
2010 | Technical Report | IST-REx-ID: 5390 | OA
K. Chatterjee and N. Fijalkow, Topological, automata-theoretic and logical characterization of finitary languages. IST Austria, 2010.
[Published Version] View | Files available | DOI
 
2010 | Conference Paper | IST-REx-ID: 3857
K. Chatterjee and T. A. Henzinger, “Probabilistic Automata on infinite words: decidability and undecidability results,” presented at the ATVA: Automated Technology for Verification and Analysis, Singapore, Singapore, 2010, vol. 6252, pp. 1–16.
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2010 | Conference Paper | IST-REx-ID: 3855 | OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Qualitative analysis of partially-observable Markov Decision Processes,” presented at the MFCS: Mathematical Foundations of Computer Science, Brno, Czech Republic, 2010, vol. 6281, pp. 258–269.
[Submitted Version] View | Files available | DOI
 
2010 | Journal Article | IST-REx-ID: 9485 | OA
A. Zemach et al., “Local DNA hypomethylation activates genes in rice endosperm,” Proceedings of the National Academy of Sciences, vol. 107, no. 43. National Academy of Sciences, pp. 18729–18734, 2010.
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2010 | Journal Article | IST-REx-ID: 9489 | OA
A. Zemach and D. Zilberman, “Evolution of eukaryotic DNA methylation and the pursuit of safer sex,” Current Biology, vol. 20, no. 17. Elsevier, pp. R780–R785, 2010.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2010 | Journal Article | IST-REx-ID: 9452
A. Zemach, I. E. McDaniel, P. Silva, and D. Zilberman, “Genome-wide evolutionary analysis of eukaryotic DNA methylation,” Science, vol. 328, no. 5980. American Association for the Advancement of Science, pp. 916–919, 2010.
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2010 | Journal Article | IST-REx-ID: 3779 | OA
U. Rosas, N. H. Barton, L. Copsey, P. Barbier De Reuille, and E. Coen, “Cryptic variation between species and the basis of hybrid performance,” PLoS Biology, vol. 8, no. 7. Public Library of Science, 2010.
[Published Version] View | Files available | DOI
 
2010 | Research Data Reference | IST-REx-ID: 9764
U. Rosas, N. H. Barton, L. Copsey, P. Barbier De Reuille, and E. Coen, “Heterosis and the drift load.” Public Library of Science, 2010.
[Published Version] View | Files available | DOI
 
2010 | Journal Article | IST-REx-ID: 12199
X. Feng and H. G. Dickinson, “Tapetal cell fate, lineage and proliferation in the Arabidopsis anther,” Development, vol. 137, no. 14. The Company of Biologists, pp. 2409–2416, 2010.
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2010 | Journal Article | IST-REx-ID: 12200
X. Feng and H. G. Dickinson, “Cell–cell interactions during patterning of the Arabidopsis anther,” Biochemical Society Transactions, vol. 38, no. 2. Portland Press Ltd., pp. 571–576, 2010.
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2010 | Conference Paper | IST-REx-ID: 3852 | OA
K. Chatterjee and R. Majumdar, “Discounting in games across time scales,” presented at the GandALF: Games, Automata, Logic, and Formal Verification, Minori, Italy, 2010, vol. 25, pp. 22–29.
[Published Version] View | Files available | DOI | arXiv
 
2010 | Thesis | IST-REx-ID: 3962
H. Pflicke, “  Dendritic cell migration across basement membranes in the skin,” Institute of Science and Technology Austria, 2010.
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2010 | Conference Paper | IST-REx-ID: 4361 | OA
T. Wies, D. Zufferey, and T. A. Henzinger, “Forward analysis of depth-bounded processes,” presented at the FoSSaCS: Foundations of Software Science and Computation Structures, Paphos, Cyprus, 2010, vol. 6014, pp. 94–108.
[Submitted Version] View | Files available | DOI
 
2010 | Journal Article | IST-REx-ID: 3785
F. Palero, P. Abello, E. Macpherson, C. Matthee, and M. Pascual, “Genetic diversity levels in fishery-exploited spiny lobsters of the Genus Palinurus (Decapoda: Achelata),” Journal of Crustacean Biology, vol. 30, no. 4. Oxford University Press, pp. 658–663, 2010.
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2010 | Book Chapter | IST-REx-ID: 14983
A. Schlögl, C. Vidaurre, and K.-R. Müller, “Adaptive Methods in BCI Research - An Introductory Tutorial,” in Brain-Computer Interfaces, 1st ed., B. Graimann, G. Pfurtscheller, and B. Allison, Eds. Berlin, Heidelberg: Springer, 2010, pp. 331–355.
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2009 | Journal Article | IST-REx-ID: 3780 | OA
A. Davison, N. H. Barton, and B. Clarke, “The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails,” Journal of Evolutionary Biology, vol. 22, no. 8. Wiley, pp. 1624–1635, 2009.
[Submitted Version] View | Files available | DOI
 
2009 | Conference Paper | IST-REx-ID: 3843 | OA
F. Didier, T. A. Henzinger, M. Mateescu, and V. Wolf, “Fast adaptive uniformization of the chemical master equation,” presented at the HIBI: High-Performance Computational Systems Biology, Trento, Italy, 2009, vol. 4, no. 6, pp. 118–127.
[Submitted Version] View | Files available | DOI
 
2009 | Conference Paper | IST-REx-ID: 3841 | OA
T. A. Henzinger, B. Jobstmann, and V. Wolf, “Formalisms for specifying Markovian population models,” presented at the RP: Reachability Problems, Palaiseau, France, 2009, vol. 5797, pp. 3–23.
[Submitted Version] View | Files available | DOI
 
2009 | Conference Paper | IST-REx-ID: 3844 | OA
T. A. Henzinger, C. Kirsch, E. Marques, and A. Sokolova, “Distributed, modular HTL,” presented at the RTSS: Real-Time Systems Symposium, Washington, DC, United States, 2009, pp. 171–180.
[Submitted Version] View | Files available | DOI
 
2009 | Conference Paper | IST-REx-ID: 3871 | OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Probabilistic weighted automata,” presented at the CONCUR: Concurrency Theory, Bologna, Italy, 2009, vol. 5710, pp. 244–258.
[Submitted Version] View | Files available | DOI
 
2009 | Journal Article | IST-REx-ID: 3870 | OA
K. Chatterjee, T. A. Henzinger, and F. Horn, “Finitary winning in omega-regular games,” ACM Transactions on Computational Logic (TOCL), vol. 11, no. 1. ACM, 2009.
[Submitted Version] View | Files available | DOI
 
2009 | Journal Article | IST-REx-ID: 4136 | OA
J. Polechova, N. H. Barton, and G. Marion, “Species’ range: Adaptation in space and time,” American Naturalist, vol. 174, no. 5. University of Chicago Press, pp. E186–E204, 2009.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2009 | Journal Article | IST-REx-ID: 4242 | OA
N. H. Barton and M. De Cara, “The evolution of strong reproductive isolation,” Evolution; International Journal of Organic Evolution, vol. 63, no. 5. Wiley, pp. 1171–1190, 2009.
[Submitted Version] View | Files available | DOI
 
2009 | Book Chapter | IST-REx-ID: 3675
N. H. Barton, “Why sex and recombination? ,” in Cold Spring Harbor Symposia on Quantitative Biology, vol. 74, Cold Spring Harbor Laboratory Press, 2009, pp. 187–195.
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2009 | Journal Article | IST-REx-ID: 3775 | OA
N. H. Barton and J. Coe, “On the application of statistical physics to evolutionary biology,” Journal of Theoretical Biology, vol. 259, no. 2. Elsevier, pp. 317–324, 2009.
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2009 | Conference Paper | IST-REx-ID: 3837 | OA
S. Tripakis, B. Lickly, T. A. Henzinger, and E. Lee, “On relational interfaces,” in EMSOFT ’09 Proceedings of the seventh ACM international conference on Embedded software, Grenoble, France, 2009, pp. 67–76.
[Submitted Version] View | Files available | DOI
 
2009 | Conference Paper | IST-REx-ID: 3968 | OA
H. Edelsbrunner and J. Harer, “The persistent Morse complex segmentation of a 3-manifold,” presented at the 3DPH: Modelling the Physiological Human, Zermatt, Switzerland, 2009, vol. 5903, pp. 36–50.
[Submitted Version] View | Files available | DOI
 
2009 | Journal Article | IST-REx-ID: 4231
N. H. Barton and H. De Vladar, “Statistical mechanics and the evolution of polygenic quantitative traits,” Genetics, vol. 181, no. 3. Genetics Society of America, pp. 997–1011, 2009.
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2009 | Conference Paper | IST-REx-ID: 4542 | OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Alternating weighted automata,” presented at the FCT: Fundamentals of Computation Theory, Wroclaw, Poland, 2009, vol. 5699, pp. 3–13.
[Submitted Version] View | Files available | DOI
 
2009 | Conference Paper | IST-REx-ID: 4545 | OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “A survey of stochastic games with limsup and liminf objectives,” presented at the ICALP: Automata, Languages and Programming, Rhodos, Greece, 2009, vol. 5556, pp. 1–15.
[Submitted Version] View | Files available | DOI
 
2009 | Conference Paper | IST-REx-ID: 4543
K. Chatterjee, T. A. Henzinger, and F. Horn, “Stochastic games with finitary objectives,” presented at the MFCS: Mathematical Foundations of Computer Science, High Tatras, Slovakia, 2009, vol. 5734, pp. 34–54.
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2009 | Conference Paper | IST-REx-ID: 4569 | OA
R. Bloem, K. Chatterjee, T. A. Henzinger, and B. Jobstmann, “Better quality in synthesis through quantitative objectives,” presented at the CAV: Computer Aided Verification, Grenoble, France, 2009, vol. 5643, pp. 140–156.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2009 | Technical Report | IST-REx-ID: 5393 | OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, Gist: A solver for probabilistic games. IST Austria, 2009.
[Published Version] View | Files available | DOI
 
2009 | Technical Report | IST-REx-ID: 5394 | OA
K. Chatterjee, T. A. Henzinger, and F. Horn, Improved lower bounds for request-response and finitary Streett games. IST Austria, 2009.
[Published Version] View | Files available | DOI
 
2009 | Technical Report | IST-REx-ID: 5392 | OA
K. Chatterjee, Probabilistic automata on infinite words: Decidability and undecidability results. IST Austria, 2009.
[Published Version] View | Files available | DOI
 
2009 | Technical Report | IST-REx-ID: 5395 | OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, Qualitative analysis of partially-observable Markov decision processes. IST Austria, 2009.
[Published Version] View | Files available | DOI
 
2009 | Journal Article | IST-REx-ID: 9453 | OA
T.-F. Hsieh et al., “Genome-wide demethylation of Arabidopsis endosperm,” Science, vol. 324, no. 5933. American Association for the Advancement of Science, pp. 1451–1454, 2009.
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