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34 Publications
2026 |
Published |
Journal Article |
IST-REx-ID: 21503 |
Computational variant predictors for pharmacogenomics: From evaluation of single alleles to assessment of adverse drug reactions to antidepressants
J. Hajto, M. Piechota, I. Krätschmer, P. Konowalska, G.E. Boyle, D.M. Fowler, M. Borczyk, M. Korostynski, Pharmacogenomics Journal 26 (2026).
[Published Version]
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J. Hajto, M. Piechota, I. Krätschmer, P. Konowalska, G.E. Boyle, D.M. Fowler, M. Borczyk, M. Korostynski, Pharmacogenomics Journal 26 (2026).
2026 |
Published |
Journal Article |
IST-REx-ID: 21484 |
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A quantitative genetic model for indirect genetic effects and genomic imprinting under random and assortative mating
I. Krätschmer, M.R. Robinson, Genetics 232 (2026).
[Published Version]
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I. Krätschmer, M.R. Robinson, Genetics 232 (2026).
2026 |
Published |
Journal Article |
IST-REx-ID: 21987 |
Separating direct, indirect, and parent-of-origin genetic effects in the human population
I. Krätschmer, L. Hegemann, R.J. Hofmeister, E.C. Corfield, M. Mahmoudi, O. Delaneau, O.A. Andreassen, A. Campbell, C. Hayward, R.E. Marioni, E. Ystrom, A. Havdahl, M.R. Robinson, Cell Genomics 6 (2026).
[Published Version]
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I. Krätschmer, L. Hegemann, R.J. Hofmeister, E.C. Corfield, M. Mahmoudi, O. Delaneau, O.A. Andreassen, A. Campbell, C. Hayward, R.E. Marioni, E. Ystrom, A. Havdahl, M.R. Robinson, Cell Genomics 6 (2026).
2026 |
Published |
Thesis | PhD |
IST-REx-ID: 22258 |
From sparse selection to risk prediction: Approximate message passing for proteomic survival models and large-scale genomics
A. Depope, From Sparse Selection to Risk Prediction: Approximate Message Passing for Proteomic Survival Models and Large-Scale Genomics, Institute of Science and Technology Austria, 2026.
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A. Depope, From Sparse Selection to Risk Prediction: Approximate Message Passing for Proteomic Survival Models and Large-Scale Genomics, Institute of Science and Technology Austria, 2026.
2026 |
Published |
Journal Article |
IST-REx-ID: 21488 |
Joint modeling of whole-genome sequencing data for human height via approximate message passing
A. Depope, J. Bajzik, M. Mondelli, M.R. Robinson, Cell Genomics 6 (2026).
[Published Version]
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A. Depope, J. Bajzik, M. Mondelli, M.R. Robinson, Cell Genomics 6 (2026).
2025 |
Published |
Journal Article |
IST-REx-ID: 18754 |
DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts
Smith HM, Ng HK, Moodie JE, Gadd DA, Mccartney DL, Bernabeu E, Campbell A, Redmond P, Taylor A, Page D, Corley J, Harris SE, Tay D, Deary IJ, Evans KL, Robinson MR, Chambers JC, Loh M, Cox SR, Marioni RE, Hillary RF. 2025. DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts. American Journal of Human Genetics. 112(1), 106–115.
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Smith HM, Ng HK, Moodie JE, Gadd DA, Mccartney DL, Bernabeu E, Campbell A, Redmond P, Taylor A, Page D, Corley J, Harris SE, Tay D, Deary IJ, Evans KL, Robinson MR, Chambers JC, Loh M, Cox SR, Marioni RE, Hillary RF. 2025. DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts. American Journal of Human Genetics. 112(1), 106–115.
2025 |
Published |
Journal Article |
IST-REx-ID: 19023 |
Blood-based epigenome-wide association study and prediction of alcohol consumption
Bernabeu E, Chybowska AD, Kresovich JK, Suderman M, Mccartney DL, Hillary RF, Corley J, Valdés-Hernández MDC, Maniega SM, Bastin ME, Wardlaw JM, Xu Z, Sandler DP, Campbell A, Harris SE, Mcintosh AM, Taylor JA, Yousefi P, Cox SR, Evans KL, Robinson MR, Vallejos CA, Marioni RE. 2025. Blood-based epigenome-wide association study and prediction of alcohol consumption. Clinical Epigenetics. 17, 14.
[Published Version]
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Bernabeu E, Chybowska AD, Kresovich JK, Suderman M, Mccartney DL, Hillary RF, Corley J, Valdés-Hernández MDC, Maniega SM, Bastin ME, Wardlaw JM, Xu Z, Sandler DP, Campbell A, Harris SE, Mcintosh AM, Taylor JA, Yousefi P, Cox SR, Evans KL, Robinson MR, Vallejos CA, Marioni RE. 2025. Blood-based epigenome-wide association study and prediction of alcohol consumption. Clinical Epigenetics. 17, 14.
2025 |
Published |
Journal Article |
IST-REx-ID: 20479 |
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Gene body methylation regulates gene expression and mediates phenotypic diversity in natural Arabidopsis populations
Z. Shahzad, E. Hollwey, J.D. Moore, J. Choi, G. Cassin-Ross, H. Rouached, M.R. Robinson, D. Zilberman, Nature Plants 11 (2025) 2084–2099.
[Published Version]
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Z. Shahzad, E. Hollwey, J.D. Moore, J. Choi, G. Cassin-Ross, H. Rouached, M.R. Robinson, D. Zilberman, Nature Plants 11 (2025) 2084–2099.
2025 |
Published |
Journal Article |
IST-REx-ID: 20491 |
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Deep eutectic solvent as a solution for polyester/cotton textile recycling
N. Depope, A. Depope, V.M. Archodoulaki, W. Ipsmiller, A. Bartl, Waste Management 208 (2025).
[Published Version]
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N. Depope, A. Depope, V.M. Archodoulaki, W. Ipsmiller, A. Bartl, Waste Management 208 (2025).
2025 |
Published |
Journal Article |
IST-REx-ID: 20816 |
Methylome-wide association studies and epigenetic biomarker development for 133 mass spectrometry-assessed circulating proteins in 14,671 Generation Scotland participants
Robertson JA, Bajzik J, Vernardis S, Chybowska AD, Mccartney DL, Grauslys A, Mur J, Smith HM, Campbell A, Drake C, Grant H, Pearce J, Russ TC, Adkin P, White M, Brigden C, Messner CB, Porteous DJ, Hayward C, Cox SR, Zelezniak A, Ralser M, Robinson MR, Marioni RE. 2025. Methylome-wide association studies and epigenetic biomarker development for 133 mass spectrometry-assessed circulating proteins in 14,671 Generation Scotland participants. Genome Biology. 26, 417.
[Published Version]
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Robertson JA, Bajzik J, Vernardis S, Chybowska AD, Mccartney DL, Grauslys A, Mur J, Smith HM, Campbell A, Drake C, Grant H, Pearce J, Russ TC, Adkin P, White M, Brigden C, Messner CB, Porteous DJ, Hayward C, Cox SR, Zelezniak A, Ralser M, Robinson MR, Marioni RE. 2025. Methylome-wide association studies and epigenetic biomarker development for 133 mass spectrometry-assessed circulating proteins in 14,671 Generation Scotland participants. Genome Biology. 26, 417.
2024 |
Published |
Journal Article |
IST-REx-ID: 14932 |
Antler allometry, the Irish elk and Gould revisited
M. Tsuboi, B.T. Kopperud, M. Matschiner, M. Grabowski, C. Syrowatka, C. Pélabon, T.F. Hansen, Evolutionary Biology 51 (2024) 149–165.
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M. Tsuboi, B.T. Kopperud, M. Matschiner, M. Grabowski, C. Syrowatka, C. Pélabon, T.F. Hansen, Evolutionary Biology 51 (2024) 149–165.
2024 |
Published |
Conference Paper |
IST-REx-ID: 17147 |
Inference of genetic effects via approximate message passing
A. Depope, M. Mondelli, M.R. Robinson, in:, 2024 IEEE International Conference on Acoustics, Speech, and Signal Processing, IEEE, 2024, pp. 13151–13155.
[Submitted Version]
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A. Depope, M. Mondelli, M.R. Robinson, in:, 2024 IEEE International Conference on Acoustics, Speech, and Signal Processing, IEEE, 2024, pp. 13151–13155.
2024 |
Published |
Thesis | PhD |
IST-REx-ID: 18642 |
Algorithms for causal learning and comparative analysis for genomic data
N.N. Machnik, Algorithms for Causal Learning and Comparative Analysis for Genomic Data, Institute of Science and Technology Austria, 2024.
[Published Version]
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N.N. Machnik, Algorithms for Causal Learning and Comparative Analysis for Genomic Data, Institute of Science and Technology Austria, 2024.
2024 |
Published |
Preprint |
IST-REx-ID: 18648 |
Causal inference for multiple risk factors and diseases from genomics data
N.N. Machnik, S.M. Mahmoudi, M. Borczyk, I. Krätschmer, M.J. Bauer, M.R. Robinson, BioRxiv (2024).
[Preprint]
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N.N. Machnik, S.M. Mahmoudi, M. Borczyk, I. Krätschmer, M.J. Bauer, M.R. Robinson, BioRxiv (2024).
2024 |
Published |
Thesis | MS |
IST-REx-ID: 17368 |
Bayesian linear regression for analyzing general omics data with time-to-event phenotypes
A. Villanueva Marijuan, Bayesian Linear Regression for Analyzing General Omics Data with Time-to-Event Phenotypes, Institute of Science and Technology Austria, 2024.
[Published Version]
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A. Villanueva Marijuan, Bayesian Linear Regression for Analyzing General Omics Data with Time-to-Event Phenotypes, Institute of Science and Technology Austria, 2024.
2023 |
Published |
Journal Article |
IST-REx-ID: 12719 |
Refining epigenetic prediction of chronological and biological age
E. Bernabeu, D.L. Mccartney, D.A. Gadd, R.F. Hillary, A.T. Lu, L. Murphy, N. Wrobel, A. Campbell, S.E. Harris, D. Liewald, C. Hayward, C. Sudlow, S.R. Cox, K.L. Evans, S. Horvath, A.M. Mcintosh, M.R. Robinson, C.A. Vallejos, R.E. Marioni, Genome Medicine 15 (2023).
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E. Bernabeu, D.L. Mccartney, D.A. Gadd, R.F. Hillary, A.T. Lu, L. Murphy, N. Wrobel, A. Campbell, S.E. Harris, D. Liewald, C. Hayward, C. Sudlow, S.R. Cox, K.L. Evans, S. Horvath, A.M. Mcintosh, M.R. Robinson, C.A. Vallejos, R.E. Marioni, Genome Medicine 15 (2023).
2023 |
Published |
Journal Article |
IST-REx-ID: 12758 |
Using AlphaFold to predict the impact of single mutations on protein stability and function
M.A. Pak, K.A. Markhieva, M.S. Novikova, D.S. Petrov, I.S. Vorobyev, E. Maksimova, F. Kondrashov, D.N. Ivankov, PLoS ONE 18 (2023).
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M.A. Pak, K.A. Markhieva, M.S. Novikova, D.S. Petrov, I.S. Vorobyev, E. Maksimova, F. Kondrashov, D.N. Ivankov, PLoS ONE 18 (2023).
2023 |
Published |
Journal Article |
IST-REx-ID: 14258 |
Genetic insights into the age-specific biological mechanisms governing human ovarian aging
S.E. Ojavee, L. Darrous, M. Patxot, K. Läll, K. Fischer, R. Mägi, Z. Kutalik, M.R. Robinson, American Journal of Human Genetics 110 (2023) 1549–1563.
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S.E. Ojavee, L. Darrous, M. Patxot, K. Läll, K. Fischer, R. Mägi, Z. Kutalik, M.R. Robinson, American Journal of Human Genetics 110 (2023) 1549–1563.
2023 |
Published |
Journal Article |
IST-REx-ID: 14689
Reply to: Revisiting the use of structural similarity index in Hi-C
E. Ing-Simmons, N.N. Machnik, J.M. Vaquerizas, Nature Genetics 55 (2023) 2053–2055.
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E. Ing-Simmons, N.N. Machnik, J.M. Vaquerizas, Nature Genetics 55 (2023) 2053–2055.
2023 |
Published |
Journal Article |
IST-REx-ID: 14753 |
Low-pT quarkonium polarization measurements: Challenges and opportunities
P. Faccioli, I. Krätschmer, C. Lourenço, Physics Letters B 840 (2023).
[Published Version]
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P. Faccioli, I. Krätschmer, C. Lourenço, Physics Letters B 840 (2023).