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Matthew Robinson

Maria Adame Galeano

Jakub Bajzik

Al Depope

Tristan Gollmart

Shimeng Huang

Ilse Krätschmer

Ekaterina Maksimova

Nick Machnik

Mahdi Mahmoudi

Christine Syrowatka

Anastasiya Tsyhanova



34 Publications

2026 | Published | Journal Article | IST-REx-ID: 21503 | OA
Hajto, Jacek, Marcin Piechota, Ilse Krätschmer, Paula Konowalska, Gabriel E. Boyle, Douglas M. Fowler, Malgorzata Borczyk, and Michal Korostynski. “Computational Variant Predictors for Pharmacogenomics: From Evaluation of Single Alleles to Assessment of Adverse Drug Reactions to Antidepressants.” Pharmacogenomics Journal. Springer Nature, 2026. https://doi.org/10.1038/s41397-026-00399-0.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2026 | Published | Journal Article | IST-REx-ID: 21484 | OA | PlanS
Krätschmer, Ilse, and Matthew Richard Robinson. “A Quantitative Genetic Model for Indirect Genetic Effects and Genomic Imprinting under Random and Assortative Mating.” Genetics. Oxford University Press, 2026. https://doi.org/10.1093/genetics/iyag042.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2026 | Published | Journal Article | IST-REx-ID: 21987 | OA
Krätschmer, Ilse, Laura Hegemann, Robin J. Hofmeister, Elizabeth C. Corfield, Mahdi Mahmoudi, Olivier Delaneau, Ole A. Andreassen, et al. “Separating Direct, Indirect, and Parent-of-Origin Genetic Effects in the Human Population.” Cell Genomics. Elsevier, 2026. https://doi.org/10.1016/j.xgen.2026.101277.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2026 | Published | Thesis | PhD | IST-REx-ID: 22258 | OA
Depope, Al. “From Sparse Selection to Risk Prediction: Approximate Message Passing for Proteomic Survival Models and Large-Scale Genomics.” Institute of Science and Technology Austria, 2026. https://doi.org/10.15479/AT-ISTA-22258.
[Published Version] View | Files available | DOI
 
2026 | Published | Journal Article | IST-REx-ID: 21488 | OA
Depope, Al, Jakub Bajzik, Marco Mondelli, and Matthew Richard Robinson. “Joint Modeling of Whole-Genome Sequencing Data for Human Height via Approximate Message Passing.” Cell Genomics. Elsevier, 2026. https://doi.org/10.1016/j.xgen.2026.101162.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2025 | Published | Journal Article | IST-REx-ID: 18754 | OA
Smith HM, Ng HK, Moodie JE, Gadd DA, Mccartney DL, Bernabeu E, Campbell A, Redmond P, Taylor A, Page D, Corley J, Harris SE, Tay D, Deary IJ, Evans KL, Robinson MR, Chambers JC, Loh M, Cox SR, Marioni RE, Hillary RF. 2025. DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts. American Journal of Human Genetics. 112(1), 106–115.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2025 | Published | Journal Article | IST-REx-ID: 19023 | OA
Bernabeu E, Chybowska AD, Kresovich JK, Suderman M, Mccartney DL, Hillary RF, Corley J, Valdés-Hernández MDC, Maniega SM, Bastin ME, Wardlaw JM, Xu Z, Sandler DP, Campbell A, Harris SE, Mcintosh AM, Taylor JA, Yousefi P, Cox SR, Evans KL, Robinson MR, Vallejos CA, Marioni RE. 2025. Blood-based epigenome-wide association study and prediction of alcohol consumption. Clinical Epigenetics. 17, 14.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2025 | Published | Journal Article | IST-REx-ID: 20479 | OA | PlanS
Shahzad, Zaigham, Elizabeth Hollwey, Jonathan D. Moore, Jaemyung Choi, Gaëlle Cassin-Ross, Hatem Rouached, Matthew Richard Robinson, and Daniel Zilberman. “Gene Body Methylation Regulates Gene Expression and Mediates Phenotypic Diversity in Natural Arabidopsis Populations.” Nature Plants. Springer Nature, 2025. https://doi.org/10.1038/s41477-025-02108-4.
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2025 | Published | Journal Article | IST-REx-ID: 20491 | OA | PlanS
Depope, Nika, Al Depope, Vasiliki Maria Archodoulaki, Wolfgang Ipsmiller, and Andreas Bartl. “Deep Eutectic Solvent as a Solution for Polyester/Cotton Textile Recycling.” Waste Management. Elsevier, 2025. https://doi.org/10.1016/j.wasman.2025.115177.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2025 | Published | Journal Article | IST-REx-ID: 20816 | OA
Robertson JA, Bajzik J, Vernardis S, Chybowska AD, Mccartney DL, Grauslys A, Mur J, Smith HM, Campbell A, Drake C, Grant H, Pearce J, Russ TC, Adkin P, White M, Brigden C, Messner CB, Porteous DJ, Hayward C, Cox SR, Zelezniak A, Ralser M, Robinson MR, Marioni RE. 2025. Methylome-wide association studies and epigenetic biomarker development for 133 mass spectrometry-assessed circulating proteins in 14,671 Generation Scotland participants. Genome Biology. 26, 417.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 14932 | OA
Tsuboi, Masahito, Bjørn Tore Kopperud, Michael Matschiner, Mark Grabowski, Chrsitine Syrowatka, Christophe Pélabon, and Thomas F. Hansen. “Antler Allometry, the Irish Elk and Gould Revisited.” Evolutionary Biology. Springer Nature, 2024. https://doi.org/10.1007/s11692-023-09624-1.
[Published Version] View | Files available | DOI | WoS
 
2024 | Published | Conference Paper | IST-REx-ID: 17147 | OA
Depope, Al, Marco Mondelli, and Matthew Richard Robinson. “Inference of Genetic Effects via Approximate Message Passing.” In 2024 IEEE International Conference on Acoustics, Speech, and Signal Processing, 13151–55. IEEE, 2024. https://doi.org/10.1109/ICASSP48485.2024.10447198.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2024 | Published | Thesis | MS | IST-REx-ID: 17368 | OA
Villanueva Marijuan, Ariadna. “Bayesian Linear Regression for Analyzing General Omics Data with Time-to-Event Phenotypes.” Institute of Science and Technology Austria, 2024. https://doi.org/10.15479/at:ista:17368.
[Published Version] View | Files available | DOI
 
2024 | Published | Thesis | PhD | IST-REx-ID: 18642 | OA
Machnik, Nick N. “Algorithms for Causal Learning and Comparative Analysis for Genomic Data.” Institute of Science and Technology Austria, 2024. https://doi.org/10.15479/at:ista:18642.
[Published Version] View | Files available | DOI
 
2024 | Published | Preprint | IST-REx-ID: 18648 | OA
Machnik, Nick N, Seyed Mahdi Mahmoudi, Malgorzata Borczyk, Ilse Krätschmer, Markus J. Bauer, and Matthew Richard Robinson. “Causal Inference for Multiple Risk Factors and Diseases from Genomics Data.” BioRxiv, 2024. https://doi.org/10.1101/2023.12.06.570392.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
2023 | Published | Journal Article | IST-REx-ID: 12719 | OA
Bernabeu, Elena, Daniel L. Mccartney, Danni A. Gadd, Robert F. Hillary, Ake T. Lu, Lee Murphy, Nicola Wrobel, et al. “Refining Epigenetic Prediction of Chronological and Biological Age.” Genome Medicine. Springer Nature, 2023. https://doi.org/10.1186/s13073-023-01161-y.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2023 | Published | Journal Article | IST-REx-ID: 12758 | OA
Pak, Marina A., Karina A. Markhieva, Mariia S. Novikova, Dmitry S. Petrov, Ilya S. Vorobyev, Ekaterina Maksimova, Fyodor Kondrashov, and Dmitry N. Ivankov. “Using AlphaFold to Predict the Impact of Single Mutations on Protein Stability and Function.” PLoS ONE. Public Library of Science, 2023. https://doi.org/10.1371/journal.pone.0282689.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2023 | Published | Journal Article | IST-REx-ID: 14258 | OA
Ojavee, Sven E., Liza Darrous, Marion Patxot, Kristi Läll, Krista Fischer, Reedik Mägi, Zoltan Kutalik, and Matthew Richard Robinson. “Genetic Insights into the Age-Specific Biological Mechanisms Governing Human Ovarian Aging.” American Journal of Human Genetics. Elsevier, 2023. https://doi.org/10.1016/j.ajhg.2023.07.006.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2023 | Published | Journal Article | IST-REx-ID: 14689
Ing-Simmons, Elizabeth, Nick N Machnik, and Juan M. Vaquerizas. “Reply to: Revisiting the Use of Structural Similarity Index in Hi-C.” Nature Genetics. Springer Nature, 2023. https://doi.org/10.1038/s41588-023-01595-5.
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2023 | Published | Journal Article | IST-REx-ID: 14753 | OA
Faccioli, Pietro, Ilse Krätschmer, and Carlos Lourenço. “Low-PT Quarkonium Polarization Measurements: Challenges and Opportunities.” Physics Letters B. Elsevier, 2023. https://doi.org/10.1016/j.physletb.2023.137871.
[Published Version] View | Files available | DOI | WoS
 

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