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268 Publications
2015 | Research Data Reference | IST-REx-ID: 9712
Other fitness models for comparison & for interacting TFBSs
M. Tugrul, T. Paixao, N.H. Barton, G. Tkačik, (2015).
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M. Tugrul, T. Paixao, N.H. Barton, G. Tkačik, (2015).
2015 | Research Data Reference | IST-REx-ID: 9715
Mathematical inference of the results
B. Trubenova, S. Novak, R. Hager, (2015).
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B. Trubenova, S. Novak, R. Hager, (2015).
2015 | Journal Article | IST-REx-ID: 1666 |
Dynamics of transcription factor binding site evolution
M. Tugrul, T. Paixao, N.H. Barton, G. Tkačik, PLoS Genetics 11 (2015).
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M. Tugrul, T. Paixao, N.H. Barton, G. Tkačik, PLoS Genetics 11 (2015).
2015 | Conference Paper | IST-REx-ID: 1835 |
Model checking gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
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M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, 9035 (2015) 469–483.
2015 | Journal Article | IST-REx-ID: 1681 |
Evolution of decisions in population games with sequentially searching individuals
T. Priklopil, K. Chatterjee, Games 6 (2015) 413–437.
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T. Priklopil, K. Chatterjee, Games 6 (2015) 413–437.
2014 | Journal Article | IST-REx-ID: 1896 |
Mathematical model of alternative mechanism of telomere length maintenance
R. Kollár, K. Bodova, J. Nosek, Ľ. Tomáška, Physical Review E Statistical Nonlinear and Soft Matter Physics 89 (2014).
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R. Kollár, K. Bodova, J. Nosek, Ľ. Tomáška, Physical Review E Statistical Nonlinear and Soft Matter Physics 89 (2014).
2014 | Journal Article | IST-REx-ID: 1909 |
The fitness costs of adaptation via phenotypic plasticity and maternal effects
T. Ezard, R. Prizak, R. Hoyle, Functional Ecology 28 (2014) 693–701.
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T. Ezard, R. Prizak, R. Hoyle, Functional Ecology 28 (2014) 693–701.
2014 | Journal Article | IST-REx-ID: 1908 |
The rate of adaptation in large sexual populations with linear chromosomes
D. Weissman, O. Hallatschek, Genetics 196 (2014) 1167–1183.
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D. Weissman, O. Hallatschek, Genetics 196 (2014) 1167–1183.
2014 | Journal Article | IST-REx-ID: 1936 |
An arms race between producers and scroungers can drive the evolution of social cognition
M. Arbilly, D. Weissman, M. Feldman, U. Grodzinski, Behavioral Ecology 25 (2014) 487–495.
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M. Arbilly, D. Weissman, M. Feldman, U. Grodzinski, Behavioral Ecology 25 (2014) 487–495.
2014 | Journal Article | IST-REx-ID: 1932 |
Cryptic genetic variation can make "irreducible complexity" a common mode of adaptation in sexual populations
M. Trotter, D. Weissman, G. Peterson, K. Peck, J. Masel, Evolution 68 (2014) 3357–3367.
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M. Trotter, D. Weissman, G. Peterson, K. Peck, J. Masel, Evolution 68 (2014) 3357–3367.
2014 | Journal Article | IST-REx-ID: 2168 |
Coalescent simulation in continuous space: Algorithms for large neighbourhood size
J. Kelleher, A. Etheridge, N.H. Barton, Theoretical Population Biology 95 (2014) 13–23.
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J. Kelleher, A. Etheridge, N.H. Barton, Theoretical Population Biology 95 (2014) 13–23.
2014 | Journal Article | IST-REx-ID: 2169 |
Diverse forms of selection in evolution and computer science
N.H. Barton, S. Novak, T. Paixao, PNAS 111 (2014) 10398–10399.
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N.H. Barton, S. Novak, T. Paixao, PNAS 111 (2014) 10398–10399.
2014 | Journal Article | IST-REx-ID: 2174 |
Stability and response of polygenic traits to stabilizing selection and mutation
H. De Vladar, N.H. Barton, Genetics 197 (2014) 749–767.
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H. De Vladar, N.H. Barton, Genetics 197 (2014) 749–767.
2014 | Journal Article | IST-REx-ID: 2252
Genetic background alters dominance relationships between mat alleles in the ciliate Tetrahymena Thermophila
S. Phadke, T. Paixao, T. Pham, S. Pham, R. Zufall, Journal of Heredity 105 (2014) 130–135.
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S. Phadke, T. Paixao, T. Pham, S. Pham, R. Zufall, Journal of Heredity 105 (2014) 130–135.
2014 | Journal Article | IST-REx-ID: 537 |
Fitness consequences of maternal and grandmaternal effects
R. Prizak, T. Ezard, R. Hoyle, Ecology and Evolution 4 (2014) 3139–3145.
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R. Prizak, T. Ezard, R. Hoyle, Ecology and Evolution 4 (2014) 3139–3145.
2014 | Journal Article | IST-REx-ID: 2170 |
Likelihood-based inference of population history from low-coverage de novo genome assemblies
J. Hearn, G. Stone, L. Bunnefeld, J. Nicholls, N.H. Barton, K. Lohse, Molecular Ecology 23 (2014) 198–211.
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J. Hearn, G. Stone, L. Bunnefeld, J. Nicholls, N.H. Barton, K. Lohse, Molecular Ecology 23 (2014) 198–211.
2014 | Journal Article | IST-REx-ID: 2023 |
Habitat heterogeneities versus spatial type frequency variances as driving forces of dispersal evolution
S. Novak, Ecology and Evolution 4 (2014) 4589–4597.
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S. Novak, Ecology and Evolution 4 (2014) 4589–4597.
2013 | Book Chapter | IST-REx-ID: 10899
Differentiation
N.H. Barton, in:, Encyclopedia of Biodiversity, 2nd ed., Elsevier, 2013, pp. 508–515.
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N.H. Barton, in:, Encyclopedia of Biodiversity, 2nd ed., Elsevier, 2013, pp. 508–515.
2013 | Journal Article | IST-REx-ID: 2287 |
The influence of demography and local mating environment on sex ratios in a wind-pollinated dioecious plant
M. Pickup, S. Barrett, Ecology and Evolution 3 (2013) 629–639.
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M. Pickup, S. Barrett, Ecology and Evolution 3 (2013) 629–639.
2013 | Journal Article | IST-REx-ID: 2473 |
Genetic hitch-hiking in spatially extended populations
N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 75–89.
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N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 75–89.
2013 | Conference Paper | IST-REx-ID: 2718 |
Can quantitative and population genetics help us understand evolutionary computation?
N.H. Barton, T. Paixao, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 1573–1580.
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N.H. Barton, T. Paixao, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 1573–1580.
2013 | Journal Article | IST-REx-ID: 2720 |
Accumulation of spontaneous mutations in the ciliate Tetrahymena thermophila
H. Long, T. Paixao, R. Azevedo, R. Zufall, Genetics 195 (2013) 527–540.
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H. Long, T. Paixao, R. Azevedo, R. Zufall, Genetics 195 (2013) 527–540.
2013 | Conference Paper | IST-REx-ID: 2719
A variance decomposition approach to the analysis of genetic algorithms
T. Paixao, N.H. Barton, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 845–852.
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T. Paixao, N.H. Barton, in:, Proceedings of the 15th Annual Conference on Genetic and Evolutionary Computation, ACM, 2013, pp. 845–852.
2013 | Journal Article | IST-REx-ID: 2817 |
Density games
S. Novak, K. Chatterjee, M. Nowak, Journal of Theoretical Biology 334 (2013) 26–34.
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S. Novak, K. Chatterjee, M. Nowak, Journal of Theoretical Biology 334 (2013) 26–34.
2013 | Journal Article | IST-REx-ID: 2823
Post-fire recovery of revegetated woodland communities in south-eastern Australia
M. Pickup, S. Wilson, D. Freudenberger, N. Nicholls, L. Gould, S. Hnatiuk, J. Delandre, Austral Ecology 38 (2013) 300–312.
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M. Pickup, S. Wilson, D. Freudenberger, N. Nicholls, L. Gould, S. Hnatiuk, J. Delandre, Austral Ecology 38 (2013) 300–312.
2013 | Journal Article | IST-REx-ID: 2842 |
Inference in two dimensions: Allele frequencies versus lengths of shared sequence blocks
N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 105–119.
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N.H. Barton, A. Etheridge, J. Kelleher, A. Véber, Theoretical Population Biology 87 (2013) 105–119.
2013 | Journal Article | IST-REx-ID: 2910 |
Coalescent simulation in continuous space
J. Kelleher, N.H. Barton, A. Etheridge, Bioinformatics 29 (2013) 955–956.
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J. Kelleher, N.H. Barton, A. Etheridge, Bioinformatics 29 (2013) 955–956.
2013 | Journal Article | IST-REx-ID: 2909 |
Modelling evolution in a spatial continuum
N.H. Barton, A. Etheridge, A. Véber, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
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N.H. Barton, A. Etheridge, A. Véber, Journal of Statistical Mechanics Theory and Experiment 2013 (2013).
2013 | Journal Article | IST-REx-ID: 2908 |
Does hybridisation influence speciation?
N.H. Barton, Journal of Evolutionary Biology 26 (2013) 267–269.
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N.H. Barton, Journal of Evolutionary Biology 26 (2013) 267–269.
2013 | Book Chapter | IST-REx-ID: 2907 |
Recombination and sex
N.H. Barton, in:, The Princeton Guide to Evolution, Princeton University Press, 2013, pp. 328–333.
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N.H. Barton, in:, The Princeton Guide to Evolution, Princeton University Press, 2013, pp. 328–333.
2013 | Journal Article | IST-REx-ID: 450 |
Source population characteristics affect heterosis following genetic rescue of fragmented plant populations
M. Pickup, D. Field, D. Rowell, A. Young, Proceedings of the Royal Society of London Series B Biological Sciences 280 (2013).
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M. Pickup, D. Field, D. Rowell, A. Young, Proceedings of the Royal Society of London Series B Biological Sciences 280 (2013).
2013 | Journal Article | IST-REx-ID: 2944
Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates.
S. Aeschbacher, A. Futschik, M. Beaumont, Molecular Ecology 22 (2013) 987–1002.
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S. Aeschbacher, A. Futschik, M. Beaumont, Molecular Ecology 22 (2013) 987–1002.
2013 | Research Data Reference | IST-REx-ID: 9754 |
Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies
J. Hearn, G. Stone, N.H. Barton, K. Lohse, L. Bunnefeld, (2013).
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J. Hearn, G. Stone, N.H. Barton, K. Lohse, L. Bunnefeld, (2013).
2012 | Journal Article | IST-REx-ID: 2917
The game of active search for extra terrestrial intelligence Breaking the Great Silence
H. de Vladar, International Journal of Astrobiology 12 (2012) 53–62.
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H. de Vladar, International Journal of Astrobiology 12 (2012) 53–62.
2012 | Journal Article | IST-REx-ID: 2962 |
A novel approach for choosing summary statistics in approximate Bayesian computation
S. Aeschbacher, M. Beaumont, A. Futschik, Genetics 192 (2012) 1027–1047.
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S. Aeschbacher, M. Beaumont, A. Futschik, Genetics 192 (2012) 1027–1047.
2012 | Journal Article | IST-REx-ID: 3122
Disassortative mating and the maintenance of sexual polymorphism in painted maple
D. Field, S. Barrett, Molecular Ecology 21 (2012) 3640–3643.
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D. Field, S. Barrett, Molecular Ecology 21 (2012) 3640–3643.
2012 | Journal Article | IST-REx-ID: 3131 |
Limits to the rate of adaptive substitution in sexual populations
D. Weissman, N.H. Barton, PLoS Genetics 8 (2012).
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D. Weissman, N.H. Barton, PLoS Genetics 8 (2012).
2012 | Journal Article | IST-REx-ID: 3166 |
Amino acid fermentation at the origin of the genetic code
H. de Vladar, Biology Direct 7 (2012).
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H. de Vladar, Biology Direct 7 (2012).
2012 | Book Chapter | IST-REx-ID: 3277
Can the evolution of multicellularity be anticipated in the exploration of the solar system?
H. de Vladar, J. Chela Flores, in:, Life on Earth and Other Planetary Bodies, Springer, 2012, pp. 387–405.
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H. de Vladar, J. Chela Flores, in:, Life on Earth and Other Planetary Bodies, Springer, 2012, pp. 387–405.
2012 | Journal Article | IST-REx-ID: 498 |
Predicting local adaptation in fragmented plant populations: Implications for restoration genetics
M. Pickup, D. Field, D. Rowell, A. Young, Evolutionary Applications 5 (2012) 913–924.
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M. Pickup, D. Field, D. Rowell, A. Young, Evolutionary Applications 5 (2012) 913–924.
2012 | Research Data Reference | IST-REx-ID: 9758 |
Data from: Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates
S. Aeschbacher, A. Futschik, M. Beaumont, (2012).
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S. Aeschbacher, A. Futschik, M. Beaumont, (2012).
2012 | Journal Article | IST-REx-ID: 2968 |
A likelihood based comparison of population histories in a parasitoid guild
K. Lohse, N.H. Barton, G. Melika, G. Stone, Molecular Ecology 21 (2012) 4605–4617.
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K. Lohse, N.H. Barton, G. Melika, G. Stone, Molecular Ecology 21 (2012) 4605–4617.
2012 | Research Data Reference | IST-REx-ID: 13075 |
Data from: A likelihood-based comparison of population histories in a parasitoid guild
K. Lohse, N.H. Barton, G. Stone, G. Melika, (2012).
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K. Lohse, N.H. Barton, G. Stone, G. Melika, (2012).
2011 | Journal Article | IST-REx-ID: 3372 |
Inclusive fitness theory and eusociality
Abbot P et al. 2011. Inclusive fitness theory and eusociality. Nature. 471(7339), E1–E4.
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Abbot P et al. 2011. Inclusive fitness theory and eusociality. Nature. 471(7339), E1–E4.
2011 | Journal Article | IST-REx-ID: 3394 |
Genetic drift widens the expected cline but narrows the expected cline width
J. Polechova, N.H. Barton, Genetics 189 (2011) 227–235.
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J. Polechova, N.H. Barton, Genetics 189 (2011) 227–235.
2011 | Journal Article | IST-REx-ID: 3390 |
The relation between reproductive value and genetic contribution
N.H. Barton, A. Etheridge, Genetics 188 (2011) 953–973.
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N.H. Barton, A. Etheridge, Genetics 188 (2011) 953–973.
2011 | Journal Article | IST-REx-ID: 3391 |
The contribution of statistical physics to evolutionary biology
H. de Vladar, N.H. Barton, Trends in Ecology and Evolution 26 (2011) 424–432.
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H. de Vladar, N.H. Barton, Trends in Ecology and Evolution 26 (2011) 424–432.
2011 | Journal Article | IST-REx-ID: 3784 |
Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description
F. Palero, G. Guerao, P. Clark, P. Abello, Journal of the Marine Biological Association of the United Kingdom 91 (2011) 485–492.
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F. Palero, G. Guerao, P. Clark, P. Abello, Journal of the Marine Biological Association of the United Kingdom 91 (2011) 485–492.
2011 | Journal Article | IST-REx-ID: 3290 |
A general method for calculating likelihoods under the coalescent process
K. Lohse, R. Harrison, N.H. Barton, Genetics 189 (2011) 977–987.
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K. Lohse, R. Harrison, N.H. Barton, Genetics 189 (2011) 977–987.
2011 | Journal Article | IST-REx-ID: 3380 |
Mapping Mendelian traits in asexual progeny using changes in marker allele frequency
S. Logeswaran, N.H. Barton, Genetical Research 93 (2011) 221–232.
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S. Logeswaran, N.H. Barton, Genetical Research 93 (2011) 221–232.