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94 Publications
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2025 | Research Data | IST-REx-ID: 18697 | 
Light-microscopy based connectomic reconstruction of mammalian brain tissue
J.G. Danzl, J. Lyudchik, C. Kreuzinger, (2025).
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J.G. Danzl, J. Lyudchik, C. Kreuzinger, (2025).
2025 | Published | Thesis | IST-REx-ID: 19456
The role of prefrontal spatial coding in supporting a contextual association task
Cumpelik, Andrea D, The role of prefrontal spatial coding in supporting a contextual association task. 2025
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Cumpelik, Andrea D, The role of prefrontal spatial coding in supporting a contextual association task. 2025
2025 | Research Data | IST-REx-ID: 18991 |
Research data for the publication "Learning reshapes the hippocampal representation hierarchy"
H.S.C. Chiossi, (2025).
[Published Version]
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H.S.C. Chiossi, (2025).
2025 | Published | Journal Article | IST-REx-ID: 19566 |
Optic nerve crush does not induce retinal ganglion cell loss in the contralateral eye
Schoot Uiterkamp, Florianne E, Optic nerve crush does not induce retinal ganglion cell loss in the contralateral eye. Investigative Ophthalmology & Visual Science 66 (3). 2025
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Schoot Uiterkamp, Florianne E, Optic nerve crush does not induce retinal ganglion cell loss in the contralateral eye. Investigative Ophthalmology & Visual Science 66 (3). 2025
2025 | Published | Journal Article | IST-REx-ID: 19076 |
A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics
Vega Zuniga, Tomas A, A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics. Nature Neuroscience 28. 2025
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Vega Zuniga, Tomas A, A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics. Nature Neuroscience 28. 2025
2025 | Published | Thesis | IST-REx-ID: 19557
Mapping developmental dynamics of autism spectrum disorder mouse models at single-cell resolution
L.A. Schwarz, Mapping Developmental Dynamics of Autism Spectrum Disorder Mouse Models at Single-Cell Resolution, Institute of Science and Technology Austria, 2025.
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L.A. Schwarz, Mapping Developmental Dynamics of Autism Spectrum Disorder Mouse Models at Single-Cell Resolution, Institute of Science and Technology Austria, 2025.
2025 | Published | Journal Article | IST-REx-ID: 18879 |
Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory
J. Watson, V.M. Vargas Barroso, R. Morse, A.C. Navas Olivé, M. Tavakoli, J.G. Danzl, M. Tomschik, K. Rössler, P.M. Jonas, Cell 188 (2025) 501–514.e18.
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J. Watson, V.M. Vargas Barroso, R. Morse, A.C. Navas Olivé, M. Tavakoli, J.G. Danzl, M. Tomschik, K. Rössler, P.M. Jonas, Cell 188 (2025) 501–514.e18.
2025 | Published | Thesis | IST-REx-ID: 19271
Asymmetrical modulation of fear expression via GABAB receptors in the mouse medial habenula
C. Önal, Asymmetrical Modulation of Fear Expression via GABAB Receptors in the Mouse Medial Habenula, Institute of Science and Technology Austria, 2025.
[Published Version]
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C. Önal, Asymmetrical Modulation of Fear Expression via GABAB Receptors in the Mouse Medial Habenula, Institute of Science and Technology Austria, 2025.
2025 | Published | Journal Article | IST-REx-ID: 18778 |
Mechanism of mammalian transcriptional repression by noncoding RNA
K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural & Molecular Biology 32 (2025) 607–612.
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K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural & Molecular Biology 32 (2025) 607–612.
2024 | In Press | Journal Article | IST-REx-ID: 15016 |
Adeno-associated viral tools to trace neural development and connectivity across amphibians
Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Ortega Gurrola A, Shvartsman A, Barbieri F, Toma F-A, Gorbsky GJ, Horb ME, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB. Adeno-associated viral tools to trace neural development and connectivity across amphibians. Developmental Cell.
[Published Version]
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Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Ortega Gurrola A, Shvartsman A, Barbieri F, Toma F-A, Gorbsky GJ, Horb ME, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB. Adeno-associated viral tools to trace neural development and connectivity across amphibians. Developmental Cell.
2024 | Published | Journal Article | IST-REx-ID: 15381 |
Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning
D.K. Rangel Guerrero, K. Balueva, U. Barayeu, P. Baracskay, I. Gridchyn, M. Nardin, C.N. Roth, P. Wulff, J.L. Csicsvari, Neuron 112 (2024) 2045–2061.e10.
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D.K. Rangel Guerrero, K. Balueva, U. Barayeu, P. Baracskay, I. Gridchyn, M. Nardin, C.N. Roth, P. Wulff, J.L. Csicsvari, Neuron 112 (2024) 2045–2061.e10.
2024 | Published | Journal Article | IST-REx-ID: 14794 |
Time-lapse imaging of cortical projection neuron migration in mice using mosaic analysis with double markers
A.H. Hansen, S. Hippenmeyer, STAR Protocols 5 (2024).
[Published Version]
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A.H. Hansen, S. Hippenmeyer, STAR Protocols 5 (2024).
2024 | Published | Thesis | IST-REx-ID: 18574
Visual adaptations to natural statistics
D. Gupta, Visual Adaptations to Natural Statistics, Institute of Science and Technology Austria, 2024.
[Published Version]
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D. Gupta, Visual Adaptations to Natural Statistics, Institute of Science and Technology Austria, 2024.
2024 | Published | Journal Article | IST-REx-ID: 12875 |
Multipotent progenitors instruct ontogeny of the superior colliculus
G.T. Cheung, F. Pauler, P. Koppensteiner, T. Krausgruber, C. Streicher, M. Schrammel, N.Y. Özgen, A. Ivec, C. Bock, R. Shigemoto, S. Hippenmeyer, Neuron 112 (2024) 230–246.e11.
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G.T. Cheung, F. Pauler, P. Koppensteiner, T. Krausgruber, C. Streicher, M. Schrammel, N.Y. Özgen, A. Ivec, C. Bock, R. Shigemoto, S. Hippenmeyer, Neuron 112 (2024) 230–246.e11.
2024 | Published | Journal Article | IST-REx-ID: 14683 |
Protocol for sorting cells from mouse brains labeled with mosaic analysis with double markers by flow cytometry
N. Amberg, G.T. Cheung, S. Hippenmeyer, STAR Protocols 5 (2024).
[Published Version]
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N. Amberg, G.T. Cheung, S. Hippenmeyer, STAR Protocols 5 (2024).
2024 | Published | Thesis | IST-REx-ID: 18681
Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy
M. Tavakoli, Developing Molecular and Structural Tools for Studying Brain Architecture with Super Resolution Expansion Microscopy. LICONN: Molecularly-Informed Connectomics Reconstruction with Light Microscopy, Institute of Science and Technology Austria, 2024.
[Published Version]
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M. Tavakoli, Developing Molecular and Structural Tools for Studying Brain Architecture with Super Resolution Expansion Microscopy. LICONN: Molecularly-Informed Connectomics Reconstruction with Light Microscopy, Institute of Science and Technology Austria, 2024.
2024 | Research Data | IST-REx-ID: 18579 |
A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics
T.A. Vega Zuniga, A.L. Sumser, O. Symonova, P. Koppensteiner, F. Schmidt, M.A. Jösch, (2024).
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T.A. Vega Zuniga, A.L. Sumser, O. Symonova, P. Koppensteiner, F. Schmidt, M.A. Jösch, (2024).
2024 | Published | Journal Article | IST-REx-ID: 18553 |
STK19 drives transcription-coupled repair by stimulating repair complex stability, RNA Pol II ubiquitylation, and TFIIH recruitment
A.R. Ramadhin, S.-H. Lee, D. Zhou, A.P. Testa Salmazo, C. Gonzalo-Hansen, M. van Sluis, C.M.A. Blom, R.C. Janssens, A. Raams, D. Dekkers, K. Bezstarosti, D. Slade, W. Vermeulen, A. Pines, J.A.A. Demmers, C. Bernecky, T.K. Sixma, J.A. Marteijn, Molecular Cell 84 (2024) 4740–4757.e12.
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A.R. Ramadhin, S.-H. Lee, D. Zhou, A.P. Testa Salmazo, C. Gonzalo-Hansen, M. van Sluis, C.M.A. Blom, R.C. Janssens, A. Raams, D. Dekkers, K. Bezstarosti, D. Slade, W. Vermeulen, A. Pines, J.A.A. Demmers, C. Bernecky, T.K. Sixma, J.A. Marteijn, Molecular Cell 84 (2024) 4740–4757.e12.
2024 | Published | Journal Article | IST-REx-ID: 14257 |
Imaging brain tissue architecture across millimeter to nanometer scales
J.M. Michalska, J. Lyudchik, P. Velicky, H. Korinkova, J. Watson, A. Cenameri, C.M. Sommer, N. Amberg, A. Venturino, K. Roessler, T. Czech, R. Höftberger, S. Siegert, G. Novarino, P.M. Jonas, J.G. Danzl, Nature Biotechnology 42 (2024) 1051–1064.
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J.M. Michalska, J. Lyudchik, P. Velicky, H. Korinkova, J. Watson, A. Cenameri, C.M. Sommer, N. Amberg, A. Venturino, K. Roessler, T. Czech, R. Höftberger, S. Siegert, G. Novarino, P.M. Jonas, J.G. Danzl, Nature Biotechnology 42 (2024) 1051–1064.
2024 | Published | Journal Article | IST-REx-ID: 14795 |
Adhesion-induced cortical flows pattern E-cadherin-mediated cell contacts
F.N. Arslan, E.B. Hannezo, J. Merrin, M. Loose, C.-P.J. Heisenberg, Current Biology 34 (2024) 171–182.e8.
[Published Version]
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F.N. Arslan, E.B. Hannezo, J. Merrin, M. Loose, C.-P.J. Heisenberg, Current Biology 34 (2024) 171–182.e8.
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