Transcription in 4D: the dynamic interplay between chromatin architecture and gene expression in developing pseudo-embryos
Project Period: 2024-05-01 – 2030-04-30
Funder:
European Research Council
Acronym
DynaTrans
Principal Investigator
Department(s)
Grant Number
101118866
Grant DOI
Funder
European Research Council
Funder Schema
HE-ERC-SyG
Funder Registry
6 Publications
2026 |
Published |
Journal Article |
IST-REx-ID: 21282 |
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Marr's three levels for embryonic development: Information, dynamical systems, gene networks
D. Brückner, G. Tkačik, PRX Life 4 (2026).
[Published Version]
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| DOI
| arXiv
D. Brückner, G. Tkačik, PRX Life 4 (2026).
2026 |
Published |
Journal Article |
IST-REx-ID: 22326 |
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Nonlocal decoding of positional and correlational information during development
C.Y. Zhang, P. Mateu Hoyos, D. Brückner, G. Tkačik, Physical Review Letters 137 (2026).
[Published Version]
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| DOI
C.Y. Zhang, P. Mateu Hoyos, D. Brückner, G. Tkačik, Physical Review Letters 137 (2026).
2026 |
Published |
Journal Article |
IST-REx-ID: 22363 |
Invariant nonequilibrium dynamics in gene regulation optimize information flow
B. Zoller, A. Benichou, T. Gregor, G. Tkačik, Proceedings of the National Academy of Sciences of the United States of America 123 (2026).
[Published Version]
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| Files available
| DOI
| PubMed | Europe PMC
B. Zoller, A. Benichou, T. Gregor, G. Tkačik, Proceedings of the National Academy of Sciences of the United States of America 123 (2026).
2025 |
Published |
Journal Article |
IST-REx-ID: 18849 |
Deriving a genetic regulatory network from an optimization principle
T.R. Sokolowski, T. Gregor, W. Bialek, G. Tkačik, Proceedings of the National Academy of Sciences 122 (2025).
[Published Version]
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| Files available
| DOI
| WoS
| PubMed | Europe PMC
T.R. Sokolowski, T. Gregor, W. Bialek, G. Tkačik, Proceedings of the National Academy of Sciences 122 (2025).
2025 |
Published |
Journal Article |
IST-REx-ID: 18850 |
Chromatin enables precise and scalable gene regulation with factors of limited specificity
M.L. Perkins, J. Crocker, G. Tkačik, Proceedings of the National Academy of Sciences 122 (2025).
[Published Version]
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| Files available
| DOI
| WoS
| PubMed | Europe PMC
M.L. Perkins, J. Crocker, G. Tkačik, Proceedings of the National Academy of Sciences 122 (2025).
2025 |
Published |
Journal Article |
IST-REx-ID: 19701 |
Information processing in biochemical networks
G. Tkačik, P.R.T. Wolde, Annual Review of Biophysics 54 (2025) 249–274.
[Published Version]
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| Files available
| DOI
| WoS
| PubMed | Europe PMC
G. Tkačik, P.R.T. Wolde, Annual Review of Biophysics 54 (2025) 249–274.