Cell adhesion and cell fate: An effective feedback loop during zebrafish gastrulation
Barone V. 2017. Cell adhesion and cell fate: An effective feedback loop during zebrafish gastrulation. Institute of Science and Technology Austria.
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Thesis
| PhD
| Published
| English
Author
Supervisor
Corresponding author has ISTA affiliation
Department
Series Title
ISTA Thesis
Abstract
Cell-cell contact formation constitutes the first step in the emergence of multicellularity in evolution, thereby allowing the differentiation of specialized cell types. In metazoan development, cell-cell contact formation is thought to influence cell fate specification, and cell fate specification has been implicated in cell-cell contact formation. However, remarkably little is yet known about whether and how the interaction and feedback between cell-cell contact formation and cell fate specification affect development. Here we identify a positive feedback loop between cell-cell contact duration, morphogen signaling and mesendoderm cell fate specification during zebrafish gastrulation. We show that long lasting cell-cell contacts enhance the competence of prechordal plate (ppl) progenitor cells to respond to Nodal signaling, required for proper ppl cell fate specification. We further show that Nodal signalling romotes ppl cell-cell contact duration, thereby generating an effective positive feedback loop between ppl cell-cell contact duration and cell fate specification. Finally, by using a combination of theoretical modeling and experimentation, we show that this feedback loop determines whether anterior axial mesendoderm cells become ppl progenitors or, instead, turn into endoderm progenitors. Our findings reveal that the gene regulatory networks leading to cell fate diversification within the developing embryo are controlled by the interdependent activities of cell-cell signaling and contact formation.
Publishing Year
Date Published
2017-03-01
Publisher
Institute of Science and Technology Austria
Acknowledgement
Many people accompanied me during this trip: I would not have reached my destination nor
enjoyed the travelling without them. First of all, thanks to CP. Thanks for making me part of
your team, always full of diverse, interesting and incredibly competent people and thanks for
all the good science I witnessed and participated in. It has been a
blast, an incredibly
exciting one! Thanks to JLo, for teaching me how to master my pipettes and showing me
that science is a lot of fun. Many, many thanks to Gabby for teaching me basically everything
about zebrafish and being always there to advice, sugge
st, support...and play fussball!
Thank you to Julien, for the critical eye on things, Pedro, for all the invaluable feedback and
the amazing kicker matches, and Keisuke, for showing me the light, and to the three of them
together for all the good laughs we
had. My start in Vienna would have been a lot more
difficult without you guys. Also it would not have been possible without Elena and Inês:
thanks for helping setting up this lab and for the dinners in Gugging. Thanks to Martin, for
helping me understand
the physics behind biology. Thanks to Philipp, for the interest and
advice, and to Michael, for the Viennise take on things. Thanks to Julia, for putting up with
being our technician and becoming a friend in the process. And now to the newest members
of th
e lab. Thanks to Daniel for the enthusiasm and the neverending energy and for all your
help over the years: thank you! To Jana, for showing me that one doesn’t give up, no matter
what. To Shayan, for being such a motivated student. To Matt, for helping out
with coding
and for finding punk solutions to data analysis problems. Thanks to all the members of the
lab, Verena, Hitoshi, Silvia, Conny, Karla, Nicoletta, Zoltan, Peng, Benoit, Roland, Yuuta and
Feyza, for the wonderful atmosphere in the lab. Many than
ks to Koni and Deborah: doing
experiments would have been much more difficult without your help. Special thanks to Katjia
for setting up an amazing imaging facility and for building the best team, Robert, Nasser,
Anna and Doreen: thank you for putting up w
ith all the late sortings and for helping with all
the technical problems. Thanks to Eva, Verena and Matthias for keeping the fish happy. Big
thanks to Harald Janovjak for being a present and helpful committee member over the years
and to Patrick Lemaire f
or the helpful insight and extremely interesting discussion we had
about the project. Also, this journey would not have been the same without all the friends
that I met in Dresden and then in Vienna: Daniele, Claire, Kuba, Steffi, Harold, Dejan, Irene,
Fab
ienne, Hande, Tiago, Marianne, Jon, Srdjan, Branca, Uli, Murat, Alex, Conny, Christoph,
Caro, Simone, Barbara, Felipe, Dama, Jose, Hubert and many others that filled my days with
fun and support. A special thank to my family, always close even if they are
kilometers away.
Grazie ai miei fratelli, Nunzio e William, e alla mia mamma, per essermi sempre vicini pur
vivendo a chilometri di distanza. And, last but not least, thanks to Moritz, for putting up with
the crazy life of a scientist, the living apart for
so long, never knowing when things are going
to happen. Thanks for being a great partner and my number one fan!
Page
109
ISSN
IST-REx-ID
Cite this
Barone V. Cell adhesion and cell fate: An effective feedback loop during zebrafish gastrulation. 2017. doi:10.15479/AT:ISTA:th_825
Barone, V. (2017). Cell adhesion and cell fate: An effective feedback loop during zebrafish gastrulation. Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:th_825
Barone, Vanessa. “Cell Adhesion and Cell Fate: An Effective Feedback Loop during Zebrafish Gastrulation.” Institute of Science and Technology Austria, 2017. https://doi.org/10.15479/AT:ISTA:th_825.
V. Barone, “Cell adhesion and cell fate: An effective feedback loop during zebrafish gastrulation,” Institute of Science and Technology Austria, 2017.
Barone V. 2017. Cell adhesion and cell fate: An effective feedback loop during zebrafish gastrulation. Institute of Science and Technology Austria.
Barone, Vanessa. Cell Adhesion and Cell Fate: An Effective Feedback Loop during Zebrafish Gastrulation. Institute of Science and Technology Austria, 2017, doi:10.15479/AT:ISTA:th_825.
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