ISTA Research Explorer

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Calin Guet

Stepan Ovchinnikov

Athina Diakogianni

Nathalie Gruber

Roderich Römhild

Ekaterina Krasnopeeva

Bryan Wu

Puzhen Xia

Nela Nikolic

Tobias Bergmiller

Tiago Paixao

Claudia Igler

Rok Grah

Maria Mateescu

Remy Chait

Tatjana Petrov

Isabella Tomanek

Nikola Zarevski

Moritz Lang

Anna Nagy-Staron

Mato Lagator

Kirti Jain

Maros Pleska

Stephanie Kainrath

108 Publications

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2018 | Journal Article | IST-REx-ID: 19 |

Nonoptimal gene expression creates latent potential for antibiotic resistance
A. Palmer, R.P. Chait, R. Kishony, Molecular Biology and Evolution 35 (2018) 2669–2684.

[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC

2018 | Journal Article | IST-REx-ID: 438 |

Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations
N. Nikolic, T. Bergmiller, A. Vandervelde, T. Albanese, L. Gelens, I. Moll, Nucleic Acids Research 46 (2018) 2918–2931.

[Published Version] View | Files available | DOI | WoS

2018 | Research Data | IST-REx-ID: 5569 |

Time-lapse microscopy data
T. Bergmiller, N. Nikolic, (2018).

[Published Version] View | Files available | DOI

2018 | Journal Article | IST-REx-ID: 161 |

Statistical mechanics for metabolic networks during steady state growth
D. De Martino, A.A. Mc, T. Bergmiller, C.C. Guet, G. Tkačik, Nature Communications 9 (2018).

[Published Version] View | Files available | DOI | WoS

2018 | Thesis | IST-REx-ID: 26 |

The influence of sequence context on the evolution of bacterial gene expression
M. Steinrück, The Influence of Sequence Context on the Evolution of Bacterial Gene Expression, Institute of Science and Technology Austria, 2018.

[Published Version] View | Files available | DOI

2018 | Journal Article | IST-REx-ID: 67 |

Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkačik, J.P. Bollback, C.C. Guet, Nature Ecology and Evolution 2 (2018) 1633–1643.

[Submitted Version] View | Files available | DOI | WoS

2018 | Research Data | IST-REx-ID: 5585 |

Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkačik, J.P. Bollback, C.C. Guet, (2018).

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 538 |

Grünlicht-induzierte Rezeptorinaktivierung durch Cobalamin-bindende Domänen
S. Kainrath, M. Stadler, E. Gschaider-Reichhart, M. Distel, H.L. Janovjak, Angewandte Chemie 129 (2017) 4679–4682.

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 570 |

Regulatory network structure determines patterns of intermolecular epistasis
M. Lagator, S. Sarikas, H. Acar, J.P. Bollback, C.C. Guet, ELife 6 (2017).

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 613 |

Shaping bacterial population behavior through computer interfaced control of individual cells
R.P. Chait, J. Ruess, T. Bergmiller, G. Tkačik, C.C. Guet, Nature Communications 8 (2017).

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 624 |

MazF activation promotes translational heterogeneity of the grcA mRNA in Escherichia coli populations
N. Nikolic, Z. Didara, I. Moll, PeerJ 2017 (2017).

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 655 |

Bacterial flagella grow through an injection diffusion mechanism
T. Renault, A. Abraham, T. Bergmiller, G. Paradis, S. Rainville, E. Charpentier, C.C. Guet, Y. Tu, K. Namba, J. Keener, T. Minamino, M. Erhardt, ELife 6 (2017).

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 541 |

Cell-to-cell variation and specialization in sugar metabolism in clonal bacterial populations
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, PLoS Genetics 13 (2017).

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 561 |

Effects of mutations in phage restriction sites during escape from restriction–modification
M. Pleska, C.C. Guet, Biology Letters 13 (2017).

[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC

2017 | Thesis | IST-REx-ID: 202 |

Biology of restriction-modification systems at the single-cell and population level
M. Pleska, Biology of Restriction-Modification Systems at the Single-Cell and Population Level, Institute of Science and Technology Austria, 2017.

[Published Version] View | Files available | DOI

2017 | Journal Article | IST-REx-ID: 1351 |

Model checking the evolution of gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 1336 |

Towards a runtime comparison of natural and artificial evolution
T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 78 (2017) 681–713.

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 1084

Insulation and wiring specificity of BceR like response regulators and their target promoters in Bacillus subtilis
C. Fang, A.A. Nagy-Staron, M. Grafe, R. Heermann, K. Jung, S. Gebhard, T. Mascher, Molecular Microbiology 104 (2017) 16–31.

View | DOI | WoS

2017 | Journal Article | IST-REx-ID: 954 |

On the mechanistic nature of epistasis in a canonical cis-regulatory element
M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).

[Published Version] View | Files available | DOI | WoS

2017 | Journal Article | IST-REx-ID: 1007 |

Zeros of nonlinear systems with input invariances
M. Lang, E. Sontag, Automatica 81C (2017) 46–55.

[Published Version] View | Files available | DOI | WoS