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Athina Diakogianni

Nathalie Gruber

Bryan Wu

Ekaterina Krasnopeeva

Antoine Loussouarn

Puzhen Xia

Iva Atanaskovic

Stepan Ovchinnikov

Calin Guet

Roderich Römhild

Anna Nagy-Staron

Nela Nikolic

Tobias Bergmiller

Stephanie Kainrath

Tiago Paixao

Kirti Jain

Tatjana Petrov

Claudia Igler

Remy Chait

Moritz Lang

Mato Lagator

Maria Mateescu

Rok Grah

Maros Pleska

Nikola Zarevski

Isabella Tomanek



129 Publications

2017 | Research Data Reference | IST-REx-ID: 9847 | OA
Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification
M. Pleska, C.C. Guet, (2017).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
2017 | Published | Journal Article | IST-REx-ID: 1336 | OA
Towards a runtime comparison of natural and artificial evolution
T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 78 (2017) 681–713.
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1351 | OA
Model checking the evolution of gene regulatory networks
Giacobbe, Mirco, Model checking the evolution of gene regulatory networks. Acta Informatica 54 (8). 2017
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 541 | OA
Cell-to-cell variation and specialization in sugar metabolism in clonal bacterial populations
Nikolic, Nela, Cell-to-cell variation and specialization in sugar metabolism in clonal bacterial populations. PLoS Genetics 13 (12). 2017
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9845
Mathematical model
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9844
Source data for figures and tables
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9846
Supplementary methods
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 613 | OA
Shaping bacterial population behavior through computer interfaced control of individual cells
Chait, Remy P, Shaping bacterial population behavior through computer interfaced control of individual cells. Nature Communications 8 (1). 2017
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 624 | OA
MazF activation promotes translational heterogeneity of the grcA mRNA in Escherichia coli populations
Nikolic, Nela, MazF activation promotes translational heterogeneity of the grcA mRNA in Escherichia coli populations. PeerJ 2017 (9). 2017
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 655 | OA
Bacterial flagella grow through an injection diffusion mechanism
Renault, Thibaud, Bacterial flagella grow through an injection diffusion mechanism. eLife 6. 2017
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 954 | OA
On the mechanistic nature of epistasis in a canonical cis-regulatory element
Lagator, Mato, On the mechanistic nature of epistasis in a canonical cis-regulatory element. eLife 6. 2017
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 570 | OA
Regulatory network structure determines patterns of intermolecular epistasis
Lagator, Mato, Regulatory network structure determines patterns of intermolecular epistasis. eLife 6. 2017
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9851
Heuristic prediction for multiple stresses
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9852
Resistance frequencies for different combination strategies
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9849
Modelling and simulation details
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9850
Extensions of the model
M. Lukacisinova, S. Novak, T. Paixao, (2017).
[Published Version] View | Files available | DOI
 
2017 | Research Data | IST-REx-ID: 5564 | OA
Fastq files for "Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection"
M. Steinrück, C.C. Guet, (2017).
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 696 | OA
Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes
Lukacisinova, Marta, Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology 13 (7). 2017
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 735
An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate
Barone, Vanessa, An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate. Developmental Cell 43 (2). 2017
View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1028 | OA
Green-light-induced inactivation of receptor signaling using cobalamin-binding domains
Kainrath, Stephanie, Green-light-induced inactivation of receptor signaling using cobalamin-binding domains. Angewandte Chemie - International Edition 56 (16). 2017
[Published Version] View | Files available | DOI | WoS
 

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