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160 Publications
2024 |Published| Journal Article | IST-REx-ID: 14901 |
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Tipping points of space debris in low earth orbit
K. Nomura, S. Rella, H. Merritt, M. Baltussen, D. Bird, A. Tjuka, D. Falk, International Journal of the Commons 18 (2024).
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K. Nomura, S. Rella, H. Merritt, M. Baltussen, D. Bird, A. Tjuka, D. Falk, International Journal of the Commons 18 (2024).
2024 |Published| Journal Article | IST-REx-ID: 17123 |
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Information content and optimization of self-organized developmental systems
D. Brückner, G. Tkačik, PNAS 121 (2024).
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D. Brückner, G. Tkačik, PNAS 121 (2024).
2024 |Published| Thesis | IST-REx-ID: 15020 |
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Genetic information and biological optimization
M. Hledik, Genetic Information and Biological Optimization, Institute of Science and Technology Austria, 2024.
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M. Hledik, Genetic Information and Biological Optimization, Institute of Science and Technology Austria, 2024.
2023 |Published| Journal Article | IST-REx-ID: 13127 |
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Dynamic pathogen detection and social feedback shape collective hygiene in ants
B.E. Casillas Perez, K. Bodova, A.V. Grasse, G. Tkačik, S. Cremer, Nature Communications 14 (2023).
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B.E. Casillas Perez, K. Bodova, A.V. Grasse, G. Tkačik, S. Cremer, Nature Communications 14 (2023).
2023 |Published| Journal Article | IST-REx-ID: 12762 |
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Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain
F. Lombardi, S. Pepic, O. Shriki, G. Tkačik, D. De Martino, Nature Computational Science 3 (2023) 254–263.
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F. Lombardi, S. Pepic, O. Shriki, G. Tkačik, D. De Martino, Nature Computational Science 3 (2023) 254–263.
2023 |Published| Journal Article | IST-REx-ID: 14515 |
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Path weight sampling: Exact Monte Carlo computation of the mutual information between stochastic trajectories
M. Reinhardt, G. Tkačik, P.R. Ten Wolde, Physical Review X 13 (2023).
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M. Reinhardt, G. Tkačik, P.R. Ten Wolde, Physical Review X 13 (2023).
2023 |Published| Journal Article | IST-REx-ID: 12487 |
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Criticality of neuronal avalanches in human sleep and their relationship with sleep macro- and micro-architecture
S. Scarpetta, N. Morrisi, C. Mutti, N. Azzi, I. Trippi, R. Ciliento, I. Apicella, G. Messuti, M. Angiolelli, F. Lombardi, L. Parrino, A.E. Vaudano, IScience 26 (2023) 107840.
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S. Scarpetta, N. Morrisi, C. Mutti, N. Azzi, I. Trippi, R. Ciliento, I. Apicella, G. Messuti, M. Angiolelli, F. Lombardi, L. Parrino, A.E. Vaudano, IScience 26 (2023) 107840.
2023 |Published| Conference Abstract | IST-REx-ID: 14862 |
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Complex vaccination strategies prevent the emergence of vaccine resistance
S. Rella, Y. Kulikova, A. Minnegalieva, F. Kondrashov, in:, European Journal of Public Health, Oxford University Press, 2023.
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S. Rella, Y. Kulikova, A. Minnegalieva, F. Kondrashov, in:, European Journal of Public Health, Oxford University Press, 2023.
2023 |Published| Journal Article | IST-REx-ID: 14402 |
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Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state
F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. De Arcangelis, O. Shriki, Cell Reports 42 (2023).
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F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. De Arcangelis, O. Shriki, Cell Reports 42 (2023).
2023 |Published| Journal Article | IST-REx-ID: 14656 |
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The structure of hippocampal CA1 interactions optimizes spatial coding across experience
M. Nardin, J.L. Csicsvari, G. Tkačik, C. Savin, The Journal of Neuroscience 43 (2023) 8140–8156.
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M. Nardin, J.L. Csicsvari, G. Tkačik, C. Savin, The Journal of Neuroscience 43 (2023) 8140–8156.
2022 |Published| Preprint | IST-REx-ID: 10821 |
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Alpha rhythm induces attenuation-amplification dynamics in neural activity cascades
F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
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F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
2022 |Published| Journal Article | IST-REx-ID: 11638 |
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Inferring couplings in networks across order-disorder phase transitions
V. Ngampruetikorn, V. Sachdeva, J. Torrence, J. Humplik, D.J. Schwab, S.E. Palmer, Physical Review Research 4 (2022).
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V. Ngampruetikorn, V. Sachdeva, J. Torrence, J. Humplik, D.J. Schwab, S.E. Palmer, Physical Review Research 4 (2022).
2022 |Published| Journal Article | IST-REx-ID: 12156 |
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Eukaryotic gene regulation at equilibrium, or non?
B. Zoller, T. Gregor, G. Tkačik, Current Opinion in Systems Biology 31 (2022).
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B. Zoller, T. Gregor, G. Tkačik, Current Opinion in Systems Biology 31 (2022).
2022 |Published| Journal Article | IST-REx-ID: 10530 |
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Disentangling cadherin-mediated cell-cell interactions in collective cancer cell migration
T. Zisis, D. Brückner, T. Brandstätter, W.X. Siow, J. d’Alessandro, A.M. Vollmar, C.P. Broedersz, S. Zahler, Biophysical Journal 121 (2022) P44-60.
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T. Zisis, D. Brückner, T. Brandstätter, W.X. Siow, J. d’Alessandro, A.M. Vollmar, C.P. Broedersz, S. Zahler, Biophysical Journal 121 (2022) P44-60.
2022 |Published| Journal Article | IST-REx-ID: 10736 |
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Predicting bacterial promoter function and evolution from random sequences
M. Lagator, S. Sarikas, M. Steinrueck, D. Toledo-Aparicio, J.P. Bollback, C.C. Guet, G. Tkačik, ELife 11 (2022).
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M. Lagator, S. Sarikas, M. Steinrueck, D. Toledo-Aparicio, J.P. Bollback, C.C. Guet, G. Tkačik, ELife 11 (2022).
2022 |Published| Journal Article | IST-REx-ID: 12332 |
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Efficient coding theory of dynamic attentional modulation
W.F. Mlynarski, G. Tkačik, PLoS Biology 20 (2022) e3001889.
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W.F. Mlynarski, G. Tkačik, PLoS Biology 20 (2022) e3001889.
2022 |Published| Journal Article | IST-REx-ID: 12081 |
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Accumulation and maintenance of information in evolution
M. Hledik, N.H. Barton, G. Tkačik, Proceedings of the National Academy of Sciences 119 (2022).
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M. Hledik, N.H. Barton, G. Tkačik, Proceedings of the National Academy of Sciences 119 (2022).
2021 |Published| Journal Article | IST-REx-ID: 10535 |
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Dynamic maximum entropy provides accurate approximation of structured population dynamics
K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021).
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K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021).
2021 |Submitted| Preprint | IST-REx-ID: 10912 |
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Quantifying the coexistence of neuronal oscillations and avalanches
F. Lombardi, S. Pepic, O. Shriki, G. Tkačik, D. De Martino, (n.d.).
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F. Lombardi, S. Pepic, O. Shriki, G. Tkačik, D. De Martino, (n.d.).
2021 |Submitted| Preprint | IST-REx-ID: 10579 |
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Token-driven totally asymmetric simple exclusion process
B. Kavcic, G. Tkačik, ArXiv (n.d.).
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B. Kavcic, G. Tkačik, ArXiv (n.d.).