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182 Publications

2021 | Journal Article | IST-REx-ID: 8997 | OA
Kavcic B, Tkačik G, Bollenbach MT. 2021. Minimal biophysical model of combined antibiotic action. PLOS Computational Biology. 17, e1008529.
[Published Version] View | Files available | DOI | WoS
 
2021 | Journal Article | IST-REx-ID: 9283 | OA
Nagy-Staron AA, Tomasek K, Caruso Carter C, Sonnleitner E, Kavcic B, Paixão T, Guet CC. 2021. Local genetic context shapes the function of a gene regulatory network. eLife. 10, e65993.
[Published Version] View | Files available | DOI | WoS
 
2021 | Journal Article | IST-REx-ID: 7553 | OA
Mlynarski WF, Hledik M, Sokolowski TR, Tkačik G. 2021. Statistical analysis and optimality of neural systems. Neuron. 109(7), 1227–1241.e5.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 
2021 | Preprint | IST-REx-ID: 10077 | OA
Nardin M, Csicsvari JL, Tkačik G, Savin C. The structure of hippocampal CA1 interactions optimizes spatial coding across experience. bioRxiv, 10.1101/2021.09.28.460602.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
2020 | Journal Article | IST-REx-ID: 8105 | OA
Lombardi F, Wang JWJL, Zhang X, Ivanov PC. 2020. Power-law correlations and coupling of active and quiet states underlie a class of complex systems with self-organization at criticality. EPJ Web of Conferences. 230, 00005.
[Published Version] View | Files available | DOI
 
2020 | Journal Article | IST-REx-ID: 7490 | OA
Narasimhan M, Johnson AJ, Prizak R, Kaufmann W, Tan S, Casillas Perez BE, Friml J. 2020. Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants. eLife. 9, e52067.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Research Data Reference | IST-REx-ID: 9779
Grah R, Friedlander T. 2020. Distribution of crosstalk values, Public Library of Science, 10.1371/journal.pcbi.1007642.s003.
[Published Version] View | Files available | DOI
 
2020 | Research Data Reference | IST-REx-ID: 9776
Grah R, Friedlander T. 2020. Supporting information, Public Library of Science, 10.1371/journal.pcbi.1007642.s001.
[Published Version] View | Files available | DOI
 
2020 | Journal Article | IST-REx-ID: 7656 | OA
Berry MJ, Tkačik G. 2020. Clustering of neural activity: A design principle for population codes. Frontiers in Computational Neuroscience. 14, 20.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Journal Article | IST-REx-ID: 8698 | OA
Maoz O, Tkačik G, Esteki MS, Kiani R, Schneidman E. 2020. Learning probabilistic neural representations with randomly connected circuits. Proceedings of the National Academy of Sciences of the United States of America. 117(40), 25066–25073.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Journal Article | IST-REx-ID: 8955 | OA
Rizzo R, Zhang X, Wang JWJL, Lombardi F, Ivanov PC. 2020. Network physiology of cortico–muscular interactions. Frontiers in Physiology. 11, 558070.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Journal Article | IST-REx-ID: 9000 | OA
Grah R, Zoller B, Tkačik G. 2020. Nonequilibrium models of optimal enhancer function. PNAS. 117(50), 31614–31622.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Journal Article | IST-REx-ID: 8084 | OA
Lombardi F, Gómez-Extremera M, Bernaola-Galván P, Vetrivelan R, Saper CB, Scammell TE, Ivanov PC. 2020. Critical dynamics and coupling in bursts of cortical rhythms indicate non-homeostatic mechanism for sleep-stage transitions and dual role of VLPO neurons in both sleep and wake. Journal of Neuroscience. 40(1), 171–190.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Thesis | IST-REx-ID: 8155 | OA
Grah R. 2020. Gene regulation across scales – how biophysical constraints shape evolution. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 
2020 | Preprint | IST-REx-ID: 7675 | OA
Grah R, Zoller B, Tkačik G. 2020. Normative models of enhancer function. bioRxiv, 10.1101/2020.04.08.029405.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
2020 | Journal Article | IST-REx-ID: 7569 | OA
Grah R, Friedlander T. 2020. The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. 16(2), e1007642.
[Published Version] View | Files available | DOI | WoS
 
2020 | Research Data Reference | IST-REx-ID: 9777 | OA
Grah R, Friedlander T. 2020. Maximizing crosstalk, Public Library of Science, 10.1371/journal.pcbi.1007642.s002.
View | Files available | DOI | Download None (ext.)
 
2020 | Research Data | IST-REx-ID: 8097 | OA
Kavcic B. 2020. Analysis scripts and research data for the paper ‘Mechanisms of drug interactions between translation-inhibiting antibiotics’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:8097.
[Published Version] View | Files available | DOI
 
2020 | Research Data | IST-REx-ID: 8930 | OA
Kavcic B. 2020. Analysis scripts and research data for the paper ‘Minimal biophysical model of combined antibiotic action’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:8930.
[Published Version] View | Files available | DOI
 
2020 | Research Data | IST-REx-ID: 7383 | OA
Grah R. 2020. Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation, Institute of Science and Technology Austria, 10.15479/AT:ISTA:7383.
[Published Version] View | Files available | DOI
 

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