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202 Publications
2019 |
Published |
Thesis | PhD |
IST-REx-ID: 6071 |
Prizak R. 2019. Coevolution of transcription factors and their binding sites in sequence space. Institute of Science and Technology Austria.
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2019 |
Published |
Journal Article |
IST-REx-ID: 6090 |
Carballo-Pacheco M, Desponds J, Gavrilchenko T, Mayer A, Prizak R, Reddy G, Nemenman I, Mora T. 2019. Receptor crosstalk improves concentration sensing of multiple ligands. Physical Review E. 99(2), 022423.
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| WoS
2019 |
Published |
Thesis | PhD |
IST-REx-ID: 6473 |
Cepeda Humerez SA. 2019. Estimating information flow in single cells. Institute of Science and Technology Austria.
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2019 |
Published |
Journal Article |
IST-REx-ID: 6784 |
Ruess J, Pleska M, Guet CC, Tkačik G. 2019. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 15(7), e1007168.
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2019 |
Published |
Journal Article |
IST-REx-ID: 6900 |
Cepeda Humerez SA, Ruess J, Tkačik G. 2019. Estimating information in time-varying signals. PLoS computational biology. 15(9), e1007290.
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| PubMed | Europe PMC
2019 |
Published |
Journal Article |
IST-REx-ID: 7103 |
Wang JWJL, Lombardi F, Zhang X, Anaclet C, Ivanov PC. 2019. Non-equilibrium critical dynamics of bursts in θ and δ rhythms as fundamental characteristic of sleep and wake micro-architecture. PLoS Computational Biology. 15(11), e1007268.
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| PubMed | Europe PMC
2019 |
Published |
Journal Article |
IST-REx-ID: 7422 |
Sokolowski TR, Paijmans J, Bossen L, Miedema T, Wehrens M, Becker NB, Kaizu K, Takahashi K, Dogterom M, ten Wolde PR. 2019. eGFRD in all dimensions. The Journal of Chemical Physics. 150(5), 054108.
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| arXiv
2019 |
Submitted |
Preprint |
IST-REx-ID: 7552 |
Bialek W, Gregor T, Tkačik G. Action at a distance in transcriptional regulation. arXiv, 1912.08579.
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| arXiv
2019 |
Published |
Conference Paper |
IST-REx-ID: 7606 |
Hledik M, Sokolowski TR, Tkačik G. 2019. A tight upper bound on mutual information. IEEE Information Theory Workshop, ITW 2019. Information Theory Workshop, 8989292.
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| WoS
| arXiv
2018 |
Published |
Journal Article |
IST-REx-ID: 281 |
Granados A, Pietsch J, Cepeda Humerez SA, Farquhar I, Tkačik G, Swain P. 2018. Distributed and dynamic intracellular organization of extracellular information. PNAS. 115(23), 6088–6093.
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| PubMed | Europe PMC
2018 |
Published |
Journal Article |
IST-REx-ID: 292 |
Botella Soler V, Deny S, Martius GS, Marre O, Tkačik G. 2018. Nonlinear decoding of a complex movie from the mammalian retina. PLoS Computational Biology. 14(5), e1006057.
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2018 |
Published |
Journal Article |
IST-REx-ID: 306 |
De Martino A, De Martino D. 2018. An introduction to the maximum entropy approach and its application to inference problems in biology. Heliyon. 4(4), e00596.
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2018 |
Published |
Journal Article |
IST-REx-ID: 31 |
Ferrari U, Deny S, Chalk MJ, Tkačik G, Marre O, Mora T. 2018. Separating intrinsic interactions from extrinsic correlations in a network of sensory neurons. Physical Review E. 98(4), 042410.
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2018 |
Published |
Journal Article |
IST-REx-ID: 316 |
Bodova K, Priklopil T, Field D, Barton NH, Pickup M. 2018. Evolutionary pathways for the generation of new self-incompatibility haplotypes in a non-self recognition system. Genetics. 209(3), 861–883.
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2018 |
Published |
Journal Article |
IST-REx-ID: 19 |
Palmer A, Chait RP, Kishony R. 2018. Nonoptimal gene expression creates latent potential for antibiotic resistance. Molecular Biology and Evolution. 35(11), 2669–2684.
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| PubMed | Europe PMC
2018 |
Published |
Journal Article |
IST-REx-ID: 161 |
De Martino D, Mc AA, Bergmiller T, Guet CC, Tkačik G. 2018. Statistical mechanics for metabolic networks during steady state growth. Nature Communications. 9(1), 2988.
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| WoS
2018 |
Research Data Reference |
IST-REx-ID: 9813 |
Bodova K, Priklopil T, Field D, Barton NH, Pickup M. 2018. Supplemental material for Bodova et al., 2018, Genetics Society of America, 10.25386/genetics.6148304.v1.
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2018 |
Published |
Journal Article |
IST-REx-ID: 543 |
Chalk MJ, Marre O, Tkačik G. 2018. Toward a unified theory of efficient, predictive, and sparse coding. Proceedings of the National Academy of Sciences of the United States of America. 115(1), 186–191.
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2018 |
Research Data |
IST-REx-ID: 5584 |
Deny S, Marre O, Botella-Soler V, Martius GS, Tkačik G. 2018. Nonlinear decoding of a complex movie from the mammalian retina, Institute of Science and Technology Austria, 10.15479/AT:ISTA:98.
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