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238 Publications
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2020 | Draft | Preprint | IST-REx-ID: 7800 |

Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development
J. Morandell, L.A. Schwarz, B. Basilico, S. Tasciyan, A. Nicolas, C.M. Sommer, C. Kreuzinger, L. Knaus, Z. Dobler, E. Cacci, J.G. Danzl, G. Novarino, BioRxiv (n.d.).
[Preprint]
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J. Morandell, L.A. Schwarz, B. Basilico, S. Tasciyan, A. Nicolas, C.M. Sommer, C. Kreuzinger, L. Knaus, Z. Dobler, E. Cacci, J.G. Danzl, G. Novarino, BioRxiv (n.d.).
2020 | Published | Journal Article | IST-REx-ID: 7888 |

Zebrafish embryonic explants undergo genetically encoded self-assembly
A. Schauer, D.C. Nunes Pinheiro, R. Hauschild, C.-P.J. Heisenberg, ELife 9 (2020).
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A. Schauer, D.C. Nunes Pinheiro, R. Hauschild, C.-P.J. Heisenberg, ELife 9 (2020).
2020 | Published | Journal Article | IST-REx-ID: 8139 |

Experimental toolbox for quantitative evaluation of clathrin-mediated endocytosis in the plant model Arabidopsis
A.J. Johnson, N. Gnyliukh, W. Kaufmann, M. Narasimhan, G. Vert, S. Bednarek, J. Friml, Journal of Cell Science 133 (2020).
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A.J. Johnson, N. Gnyliukh, W. Kaufmann, M. Narasimhan, G. Vert, S. Bednarek, J. Friml, Journal of Cell Science 133 (2020).
2020 | Published | Preprint | IST-REx-ID: 9750 |

Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion
J. Slovakova, M.K. Sikora, S. Caballero Mancebo, G. Krens, W. Kaufmann, K. Huljev, C.-P.J. Heisenberg, BioRxiv (2020).
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J. Slovakova, M.K. Sikora, S. Caballero Mancebo, G. Krens, W. Kaufmann, K. Huljev, C.-P.J. Heisenberg, BioRxiv (2020).
2020 | Published | Journal Article | IST-REx-ID: 7885 |

Cellular locomotion using environmental topography
A. Reversat, F.R. Gärtner, J. Merrin, J.A. Stopp, S. Tasciyan, J.L. Aguilera Servin, I. de Vries, R. Hauschild, M. Hons, M. Piel, A. Callan-Jones, R. Voituriez, M.K. Sixt, Nature 582 (2020) 582–585.
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A. Reversat, F.R. Gärtner, J. Merrin, J.A. Stopp, S. Tasciyan, J.L. Aguilera Servin, I. de Vries, R. Hauschild, M. Hons, M. Piel, A. Callan-Jones, R. Voituriez, M.K. Sixt, Nature 582 (2020) 582–585.
2019 | Published | Journal Article | IST-REx-ID: 6093 |

Fluid dynamics during bleb formation in migrating cells in vivo
M. Goudarzi, A. Boquet-Pujadas, J.C. Olivo-Marin, E. Raz, PLOS ONE 14 (2019).
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M. Goudarzi, A. Boquet-Pujadas, J.C. Olivo-Marin, E. Raz, PLOS ONE 14 (2019).
2019 | Published | Conference Abstract | IST-REx-ID: 12901 |

Is Debian suitable for running an HPC Cluster?
A. Schlögl, J. Kiss, S. Elefante, in:, AHPC19 - Austrian HPC Meeting 2019 , Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz, 2019, p. 25.
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A. Schlögl, J. Kiss, S. Elefante, in:, AHPC19 - Austrian HPC Meeting 2019 , Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz, 2019, p. 25.
2019 | Published | Journal Article | IST-REx-ID: 7415
S.16.05 Illuminating the role of the e3 ubiquitin ligase cullin3 in brain development and autism
J. Morandell, A. Nicolas, L.A. Schwarz, G. Novarino, European Neuropsychopharmacology 29 (2019) S11–S12.
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J. Morandell, A. Nicolas, L.A. Schwarz, G. Novarino, European Neuropsychopharmacology 29 (2019) S11–S12.
2019 | Published | Journal Article | IST-REx-ID: 6607 |

SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness
C.H. Nguyen, T. Glüxam, A. Schlerka, K. Bauer, A.M. Grandits, H. Hackl, O. Dovey, S. Zöchbauer-Müller, J.L. Cooper, G.S. Vassiliou, D. Stoiber, R. Wieser, G. Heller, Scientific Reports 9 (2019).
[Published Version]
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C.H. Nguyen, T. Glüxam, A. Schlerka, K. Bauer, A.M. Grandits, H. Hackl, O. Dovey, S. Zöchbauer-Müller, J.L. Cooper, G.S. Vassiliou, D. Stoiber, R. Wieser, G. Heller, Scientific Reports 9 (2019).
2019 | Published | Journal Article | IST-REx-ID: 6657 |

An Austrian proposal for the classification of Open Access Tuples (COAT) - distinguish different open access types beyond colors
P. Danowski, Mitteilungen Der Vereinigung Österreichischer Bibliothekarinnen Und Bibliothekare 72 (2019) 59–65.
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P. Danowski, Mitteilungen Der Vereinigung Österreichischer Bibliothekarinnen Und Bibliothekare 72 (2019) 59–65.
2019 | Published | Journal Article | IST-REx-ID: 6819 |

Glyphosate does not substitute for glycine in proteins of actively dividing mammalian cells
M.N. Antoniou, A. Nicolas, R. Mesnage, M. Biserni, F.V. Rao, C.V. Martin, BMC Research Notes 12 (2019).
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M.N. Antoniou, A. Nicolas, R. Mesnage, M. Biserni, F.V. Rao, C.V. Martin, BMC Research Notes 12 (2019).
2019 | Published | Journal Article | IST-REx-ID: 6867 |

A novel magnet-based scratch method for standardisation of wound-healing assays
M. Fenu, T. Bettermann, C. Vogl, N. Darwish-Miranda, J. Schramel, F. Jenner, I. Ribitsch, Scientific Reports 9 (2019).
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M. Fenu, T. Bettermann, C. Vogl, N. Darwish-Miranda, J. Schramel, F. Jenner, I. Ribitsch, Scientific Reports 9 (2019).
2019 | Published | Journal Article | IST-REx-ID: 7225 |

Frontiers in microfluidics, a teaching resource review
J. Merrin, Bioengineering 6 (2019).
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J. Merrin, Bioengineering 6 (2019).
2019 | Research Data Reference | IST-REx-ID: 9784 |

MOESM1 of Glyphosate does not substitute for glycine in proteins of actively dividing mammalian cells
M.N. Antoniou, A. Nicolas, R. Mesnage, M. Biserni, F.V. Rao, C.V. Martin, (2019).
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M.N. Antoniou, A. Nicolas, R. Mesnage, M. Biserni, F.V. Rao, C.V. Martin, (2019).
2019 | Published | Journal Article | IST-REx-ID: 6087 |

Lateral inhibition in cell specification mediated by mechanical signals modulating TAZ activity
P. Xia, D.J. Gütl, V. Zheden, C.-P.J. Heisenberg, Cell 176 (2019) 1379–1392.e14.
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P. Xia, D.J. Gütl, V. Zheden, C.-P.J. Heisenberg, Cell 176 (2019) 1379–1392.e14.
2019 | Published | Journal Article | IST-REx-ID: 6052 |

A practical guide to optimization in X10 expansion microscopy
S.M. Truckenbrodt, C.M. Sommer, S.O. Rizzoli, J.G. Danzl, Nature Protocols 14 (2019) 832–863.
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S.M. Truckenbrodt, C.M. Sommer, S.O. Rizzoli, J.G. Danzl, Nature Protocols 14 (2019) 832–863.
2019 | Published | Journal Article | IST-REx-ID: 7406
Isolation of synaptic vesicles from genetically engineered cultured neurons
C. Mckenzie, M. Spanova, A.J. Johnson, S. Kainrath, V. Zheden, H.H. Sitte, H.L. Janovjak, Journal of Neuroscience Methods 312 (2019) 114–121.
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C. Mckenzie, M. Spanova, A.J. Johnson, S. Kainrath, V. Zheden, H.H. Sitte, H.L. Janovjak, Journal of Neuroscience Methods 312 (2019) 114–121.
2019 | Published | Journal Article | IST-REx-ID: 6328 |

Nuclear positioning facilitates amoeboid migration along the path of least resistance
J. Renkawitz, A. Kopf, J.A. Stopp, I. de Vries, M.K. Driscoll, J. Merrin, R. Hauschild, E.S. Welf, G. Danuser, R. Fiolka, M.K. Sixt, Nature 568 (2019) 546–550.
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J. Renkawitz, A. Kopf, J.A. Stopp, I. de Vries, M.K. Driscoll, J. Merrin, R. Hauschild, E.S. Welf, G. Danuser, R. Fiolka, M.K. Sixt, Nature 568 (2019) 546–550.
2018 | Published | Thesis | IST-REx-ID: 278 |

Lizenzverträge mit Open-Access-Komponenten an österreichischen Bibliotheken
M. Villányi, Lizenzverträge mit Open-Access-Komponenten an österreichischen Bibliotheken, Universität Wien, 2018.
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M. Villányi, Lizenzverträge mit Open-Access-Komponenten an österreichischen Bibliotheken, Universität Wien, 2018.
2018 | Published | Journal Article | IST-REx-ID: 53 |

IST PubRep and IST DataRep: the institutional repositories at IST Austria
B. Petritsch, J. Porsche, VÖB Mitteilungen 71 (2018) 199–206.
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B. Petritsch, J. Porsche, VÖB Mitteilungen 71 (2018) 199–206.
2018 | Research Data | IST-REx-ID: 5574 |

Data Check IOP Scopus vs. Publisher
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5575 |

Data Check RSC Scopus vs. FWF
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5576 |

Data Check T&F Scopus vs. FWF
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5577 |

Emerald Austrian Publications 2013-2017
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5578 |

IOP Austrian Publications 2012-2015
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5579 |

RSC Austrian Publications 2013-2017
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5580 |

SAGE Austrian Publications 2013-2017
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5581 |

Springer Austrian Publications 2013-2016
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5582 |

Taylor&Francis Austrian Publications 2013-2017
M. Villányi, (2018).
[Submitted Version]
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M. Villányi, (2018).
2018 | Research Data | IST-REx-ID: 5588 |

Fluorescence lifetime analysis of FLIM X16 TCSPC data
R. Hauschild, (2018).
[Published Version]
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R. Hauschild, (2018).
2018 | Published | Working Paper | IST-REx-ID: 5686 |

An Austrian proposal for the Classification of Open Access Tuples (COAT) - Distinguish different Open Access types beyond colors
P. Danowski, An Austrian Proposal for the Classification of Open Access Tuples (COAT) - Distinguish Different Open Access Types beyond Colors, 2018.
[Published Version]
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P. Danowski, An Austrian Proposal for the Classification of Open Access Tuples (COAT) - Distinguish Different Open Access Types beyond Colors, 2018.
2018 | Published | Journal Article | IST-REx-ID: 163 |

Agitation modules: Flexible means to accelerate automated freeze substitution
S. Reipert, H. Goldammer, C. Richardson, M. Goldberg, T. Hawkins, E. Saeckl, W. Kaufmann, S. Antreich, Y. Stierhof, Journal of Histochemistry and Cytochemistry 66 (2018) 903–921.
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S. Reipert, H. Goldammer, C. Richardson, M. Goldberg, T. Hawkins, E. Saeckl, W. Kaufmann, S. Antreich, Y. Stierhof, Journal of Histochemistry and Cytochemistry 66 (2018) 903–921.
2018 | Published | Journal Article | IST-REx-ID: 192 |

Rapid and reversible root growth inhibition by TIR1 auxin signalling
M. Fendrych, M. Akhmanova, J. Merrin, M. Glanc, S. Hagihara, K. Takahashi, N. Uchida, K.U. Torii, J. Friml, Nature Plants 4 (2018) 453–459.
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M. Fendrych, M. Akhmanova, J. Merrin, M. Glanc, S. Hagihara, K. Takahashi, N. Uchida, K.U. Torii, J. Friml, Nature Plants 4 (2018) 453–459.
2018 | Published | Conference Poster | IST-REx-ID: 6459 |

Open Access at IST Austria 2009-2017
B. Petritsch, Open Access at IST Austria 2009-2017, IST Austria, 2018.
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B. Petritsch, Open Access at IST Austria 2009-2017, IST Austria, 2018.
2018 | Published | Book Chapter | IST-REx-ID: 153
Micro-engineered “pillar forests” to study cell migration in complex but controlled 3D environments
Renkawitz, Jörg, Micro-engineered “pillar forests” to study cell migration in complex but controlled 3D environments. Methods in Cell Biology 147. 2018
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Renkawitz, Jörg, Micro-engineered “pillar forests” to study cell migration in complex but controlled 3D environments. Methods in Cell Biology 147. 2018
2018 | Published | Journal Article | IST-REx-ID: 437 |

Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration
A.F. Leithner, J. Renkawitz, I. de Vries, R. Hauschild, H. Haecker, M.K. Sixt, European Journal of Immunology 48 (2018) 1074–1077.
[Published Version]
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A.F. Leithner, J. Renkawitz, I. de Vries, R. Hauschild, H. Haecker, M.K. Sixt, European Journal of Immunology 48 (2018) 1074–1077.
2018 | Published | Journal Article | IST-REx-ID: 275 |

Lymphatic exosomes promote dendritic cell migration along guidance cues
M. Brown, L. Johnson, D. Leone, P. Májek, K. Vaahtomeri, D. Senfter, N. Bukosza, H. Schachner, G. Asfour, B. Langer, R. Hauschild, K. Parapatics, Y. Hong, K. Bennett, R. Kain, M. Detmar, M.K. Sixt, D. Jackson, D. Kerjaschki, Journal of Cell Biology 217 (2018) 2205–2221.
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M. Brown, L. Johnson, D. Leone, P. Májek, K. Vaahtomeri, D. Senfter, N. Bukosza, H. Schachner, G. Asfour, B. Langer, R. Hauschild, K. Parapatics, Y. Hong, K. Bennett, R. Kain, M. Detmar, M.K. Sixt, D. Jackson, D. Kerjaschki, Journal of Cell Biology 217 (2018) 2205–2221.
2018 | Published | Journal Article | IST-REx-ID: 308 |

Drosophila TNF modulates tissue tension in the embryo to facilitate macrophage invasive migration
A. Ratheesh, J. Bicher, M. Smutny, J. Veselá, E. Papusheva, G. Krens, W. Kaufmann, A. György, A.M. Casano, D.E. Siekhaus, Developmental Cell 45 (2018) 331–346.
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A. Ratheesh, J. Bicher, M. Smutny, J. Veselá, E. Papusheva, G. Krens, W. Kaufmann, A. György, A.M. Casano, D.E. Siekhaus, Developmental Cell 45 (2018) 331–346.
2018 | Published | Journal Article | IST-REx-ID: 442 |

Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls
L. Li, G. Krens, M. Fendrych, J. Friml, Bio-Protocol 8 (2018).
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L. Li, G. Krens, M. Fendrych, J. Friml, Bio-Protocol 8 (2018).
2018 | Published | Journal Article | IST-REx-ID: 15 |

Chemokines and integrins independently tune actin flow and substrate friction during intranodal migration of T cells
M. Hons, A. Kopf, R. Hauschild, A.F. Leithner, F.R. Gärtner, J. Abe, J. Renkawitz, J. Stein, M.K. Sixt, Nature Immunology 19 (2018) 606–616.
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M. Hons, A. Kopf, R. Hauschild, A.F. Leithner, F.R. Gärtner, J. Abe, J. Renkawitz, J. Stein, M.K. Sixt, Nature Immunology 19 (2018) 606–616.
2017 | Research Data | IST-REx-ID: 5570 |

Forward migration indexes
R. Hauschild, (2017).
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R. Hauschild, (2017).
2017 | Published | Conference Abstract | IST-REx-ID: 12905 |

Scientific Computing at IST Austria
A. Schlögl, J. Kiss, in:, AHPC17 – Austrian HPC Meeting 2017, FSP Scientific Computing, 2017, p. 28.
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A. Schlögl, J. Kiss, in:, AHPC17 – Austrian HPC Meeting 2017, FSP Scientific Computing, 2017, p. 28.
2017 | Published | Conference Paper | IST-REx-ID: 630 |

Biosignals standards and FHIR: The way to go
S. Sauermann, V. David, A. Schlögl, R. Egelkraut, M. Frohner, B. Pohn, P. Urbauer, A. Mense, in:, IOS Press, 2017, pp. 356–362.
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S. Sauermann, V. David, A. Schlögl, R. Egelkraut, M. Frohner, B. Pohn, P. Urbauer, A. Mense, in:, IOS Press, 2017, pp. 356–362.
2017 | Published | Journal Article | IST-REx-ID: 675
Surface enhanced infrared absorption of chemisorbed carbon monoxide using plasmonic nanoantennas
J. Haase, S. Bagiante, H. Sigg, J. Van Bokhoven, Optics Letters 42 (2017) 1931–1934.
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J. Haase, S. Bagiante, H. Sigg, J. Van Bokhoven, Optics Letters 42 (2017) 1931–1934.
2017 | Published | Conference Paper | IST-REx-ID: 18286 |

Deep functional maps: Structured prediction for dense shape correspondence
O. Litany, T. Remez, E. Rodola, A. Bronstein, M. Bronstein, in:, 2017 IEEE International Conference on Computer Vision (ICCV), IEEE, 2017.
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O. Litany, T. Remez, E. Rodola, A. Bronstein, M. Bronstein, in:, 2017 IEEE International Conference on Computer Vision (ICCV), IEEE, 2017.
2017 | Published | Journal Article | IST-REx-ID: 1030 |

Ein freies Bibliothekssystem für wissenschaftliche Bibliotheken – Werkstattbericht der IST Austria Library
M. Villányi, Informationspraxis 3 (2017).
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M. Villányi, Informationspraxis 3 (2017).
2017 | Published | Report | IST-REx-ID: 5450 |

Implementing the institutional data repository IST DataRep
Petritsch, Barbara, Implementing the institutional data repository IST DataRep. 2017
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Petritsch, Barbara, Implementing the institutional data repository IST DataRep. 2017
2017 | Published | Journal Article | IST-REx-ID: 693 |

Numbers of presynaptic Ca2+ channel clusters match those of functionally defined vesicular docking sites in single central synapses
Miki, Takafumi, Numbers of presynaptic Ca2+ channel clusters match those of functionally defined vesicular docking sites in single central synapses. PNAS 114 (26). 2017
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Miki, Takafumi, Numbers of presynaptic Ca2+ channel clusters match those of functionally defined vesicular docking sites in single central synapses. PNAS 114 (26). 2017
2017 | Research Data | IST-REx-ID: 5560 |

Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity
T. Bergmiller, A.M. Andersson, K. Tomasek, E. Balleza, D. Kiviet, R. Hauschild, G. Tkačik, C.C. Guet, (2017).
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T. Bergmiller, A.M. Andersson, K. Tomasek, E. Balleza, D. Kiviet, R. Hauschild, G. Tkačik, C.C. Guet, (2017).
2017 | Published | Journal Article | IST-REx-ID: 665
Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity
Bergmiller, Tobias, Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity. Science 356 (6335). 2017
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Bergmiller, Tobias, Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity. Science 356 (6335). 2017
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