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105 Publications

2026 | Submitted | Preprint | IST-REx-ID: 21963 | OA
Miranda O, Contreras X, Pauler F, Davaatseren A, Amberg N, Streicher C, Villalba Requena A, Heger A-M, Marie C, Hassan BA, Rülicke T, Hippenmeyer S. Pten orchestrates neurogenic radial glia lineage progression and tunes neocortical astrocyte production. bioRxiv, 10.64898/2026.05.01.722191.
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2026 | Epub ahead of print | Journal Article | IST-REx-ID: 21948 | OA | PlanS
Varela Martínez I, Pipicelli F, Hippenmeyer S. 2026. Tracing cell lineages in the developing brain: Insights from mosaic analysis and clone-resolved transcriptomics. Current Opinion in Genetics & Development. 99, 102487.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2026 | Published | Journal Article | IST-REx-ID: 22714 | OA | PlanS
Varela Martínez I, Villalba Requena A, García-Marqués J, Aguilera A, Castro DS, Hippenmeyer S, Nieto M. 2026. Early fate diversification of radial glial progenitors during corticogenesis. Science Advances. 12(32), eadw5487.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2026 | Epub ahead of print | Journal Article | IST-REx-ID: 22753 | OA | PlanS
Stouffer MA, Miranda O, Pauler F, Pipicelli F, Streicher C, Cheung GT, Hippenmeyer S. 2026. Temporal uncoupling of radial glia lineage progression in cortical organoids. Nature.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2025 | Published | Journal Article | IST-REx-ID: 14647 | OA
Bose M, Suresh V, Mishra U, Talwar I, Yadav A, Biswas S, Hippenmeyer S, Tole S. 2025. Dual role of FOXG1 in regulating gliogenesis in the developing neocortex via the FGF signalling pathway. eLife. 13, 101851.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2025 | Published | Book Chapter | IST-REx-ID: 18765
Cheung GT, Pauler F, Hippenmeyer S. 2025.Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM). In: Lineage Tracing. Methods in Molecular Biology, vol. 2886, 139–151.
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2025 | Published | Journal Article | IST-REx-ID: 19718 | OA | PlanS
Pipicelli F, Villalba Requena A, Hippenmeyer S. 2025. How radial glia progenitor lineages generate cell-type diversity in the developing cerebral cortex. Current Opinion in Neurobiology. 93, 103046.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2025 | Published | Journal Article | IST-REx-ID: 20079
Yotova I, Proestling K, Pauler F, Rainer L, Kaup L, Heine J, Sandrieser L, Wenzl R, Hudson QJ. 2025. LINC01638 promotes epithelial-to-mesenchymal transition in endometriosis epithelial cells by up-regulating RHOB via HDAC1 suppression. Reproductive Biomedicine Online. 51(3), 104942.
View | DOI | WoS | PubMed | Europe PMC
 
2025 | Published | Thesis | PhD | IST-REx-ID: 20737
Casado Polanco R. 2025. Role of NOTCH signaling in radial glial progenitor lineage progression. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 
2025 | Published | Journal Article | IST-REx-ID: 8616 | OA
Gao X, Li J-L, Chen X, Ci B, Chen F, Lu N, Shen B, Zheng L, Jia J-M, Yi Y, Zhang S, Shi Y-C, Shi K, Propson NE, Huang Y, Poinsatte K, Zhang Z, Yue Y, Bosco DB, Lu Y, Yang S, Adams RH, Lindner V, Huang F, Wu L-J, Zheng H, Han F, Hippenmeyer S, Stowe AM, Peng B, Margeta M, Wang X, Liu Q, Körbelin J, Trepel M, Lu H, Zhou BO, Zhao H, Su W, Bachoo RM, Ge W. 2025. Reduction of neuronal activity mediated by blood-vessel regression in the brain. Nature Communications. 16, 5840.
[Published Version] View | Files available | DOI | WoS
 
2025 | Submitted | Preprint | IST-REx-ID: 19762 | OA
Cárdenas A, Çelik I, Espinós A, Streicher C, López-González L, del-Valle-Anton L, Fernández V, Amin S, Negri E, Ortuño EF, Hippenmeyer S, Borrell V. Early indirect neurogenesis transitions to late direct neurogenesis in mouse cerebral cortex development. bioRxiv, 10.1101/2025.05.22.655488.
[Preprint] View | DOI | Download Preprint (ext.) | bioRxiv
 
2025 | Submitted | Preprint | IST-REx-ID: 19717 | OA
Varela-Martínez I, Villalba Requena A, Garcia-Marqués J, Hippenmeyer S, Nieto M. Early emergence of projection-subtype fate-restricted radial glial progenitors orchestrates neocortical neurogenesis. bioRxiv, 10.1101/2025.05.07.652665.
[Preprint] View | DOI | Download Preprint (ext.)
 
2025 | Published | Thesis | PhD | IST-REx-ID: 20212 | OA
Miranda O. 2025. Unraveling the role of Pten in cortical stem cell lineage progression using MADM. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 
2024 | Published | Journal Article | IST-REx-ID: 12875 | OA
Cheung GT, Pauler F, Koppensteiner P, Krausgruber T, Streicher C, Schrammel M, Özgen NY, Ivec A, Bock C, Shigemoto R, Hippenmeyer S. 2024. Multipotent progenitors instruct ontogeny of the superior colliculus. Neuron. 112(2), 230–246.e11.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 14683 | OA
Amberg N, Cheung GT, Hippenmeyer S. 2024. Protocol for sorting cells from mouse brains labeled with mosaic analysis with double markers by flow cytometry. STAR Protocols. 5(1), 102771.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 14794 | OA
Hansen AH, Hippenmeyer S. 2024. Time-lapse imaging of cortical projection neuron migration in mice using mosaic analysis with double markers. STAR Protocols. 5(1), 102795.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Research Data | IST-REx-ID: 15385 | OA
Burnett L, Koppensteiner P, Symonova O, Masson T, Vega Zuniga TA, Contreras X, Rülicke T, Shigemoto R, Novarino G, Jösch MA. 2024. Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice, Institute of Science and Technology Austria, 10.15479/AT:ISTA:15385.
[Published Version] View | Files available | DOI
 
2024 | Published | Journal Article | IST-REx-ID: 17187 | OA
Cheung GT, Streicher C, Hippenmeyer S. 2024. Protocol for quantitative reconstruction of cell lineage using mosaic analysis with double markers in mice. STAR Protocols. 5(3), 103157.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 17232 | OA
Cheung GT, Pauler F, Koppensteiner P, Hippenmeyer S. 2024. Protocol for mapping cell lineage and cell-type identity of clonally-related cells in situ using MADM-CloneSeq. STAR Protocols. 5(3), 103168.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Book Chapter | IST-REx-ID: 17425
Miranda O, Cheung GT, Hippenmeyer S. 2024.Morphological Analysis of Neurons and Glia Using Mosaic Analysis with Double Markers. In: Neuronal Morphogenesis. Methods in Molecular Biology, vol. 2831, 283–299.
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