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38 Publications

2022 | Published | Journal Article | IST-REx-ID: 12261 | OA
Angermayr, Andreas, et al. “Growth‐mediated Negative Feedback Shapes Quantitative Antibiotic Response.” Molecular Systems Biology, vol. 18, no. 9, e10490, Embo Press, 2022, doi:10.15252/msb.202110490.
[Published Version] View | Files available | DOI | WoS
 
2019 | Published | Journal Article | IST-REx-ID: 7026 | OA
Lukacisin, Martin, and Mark Tobias Bollenbach. “Emergent Gene Expression Responses to Drug Combinations Predict Higher-Order Drug Interactions.” Cell Systems, vol. 9, no. 5, Cell Press, 2019, pp. 423-433.e1-e3, doi:10.1016/j.cels.2019.10.004.
[Published Version] View | Files available | DOI | WoS
 
2019 | Published | Thesis | IST-REx-ID: 6392 | OA
Lukacisin, Martin. Quantitative Investigation of Gene Expression Principles through Combinatorial Drug Perturbation and Theory. IST Austria, 2019, doi:10.15479/AT:ISTA:6392.
[Published Version] View | Files available | DOI
 
2018 | Published | Thesis | IST-REx-ID: 6263 | OA
Lukacisinova, Marta. Genetic Determinants of Antibiotic Resistance Evolution. Institute of Science and Technology Austria, 2018, doi:10.15479/AT:ISTA:th1072.
[Published Version] View | Files available | DOI
 
2017 | Research Data | IST-REx-ID: 5563 | OA
Lukacisin, Martin. MATLAB Analysis Code for “Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast.” Institute of Science and Technology Austria, 2017, doi:10.15479/AT:ISTA:64.
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 822 | OA
De Vos, Marjon, Interaction networks, ecological stability, and collective antibiotic tolerance in polymicrobial infections. PNAS 114 (40). 2017
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2017 | Published | Journal Article | IST-REx-ID: 520
Du, Wei, Nonhierarchical flux regulation exposes the fitness burden associated with lactate production in Synechocystis sp. PCC6803. ACS Synthetic Biology 6 (3). 2017
View | DOI | PubMed | Europe PMC
 
2017 | Published | Thesis | IST-REx-ID: 818 | OA
Mitosch, Karin. Timing, Variability and Cross-Protection in Bacteria – Insights from Dynamic Gene Expression Responses to Antibiotics. Institute of Science and Technology Austria, 2017, doi:10.15479/AT:ISTA:th_862.
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 666 | OA
Mitosch, Karin, Noisy response to antibiotic stress predicts subsequent single cell survival in an acidic environment. Cell Systems 4 (4). 2017
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9851
Lukacisinova, Marta, et al. Heuristic Prediction for Multiple Stresses. Public Library of Science, 2017, doi:10.1371/journal.pcbi.1005609.s003.
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9852
Lukacisinova, Marta, et al. Resistance Frequencies for Different Combination Strategies. Public Library of Science, 2017, doi:10.1371/journal.pcbi.1005609.s004.
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9849
Lukacisinova, Marta, et al. Modelling and Simulation Details. Public Library of Science, 2017, doi:10.1371/journal.pcbi.1005609.s001.
[Published Version] View | Files available | DOI
 
2017 | Research Data Reference | IST-REx-ID: 9850
Lukacisinova, Marta, et al. Extensions of the Model. Public Library of Science, 2017, doi:10.1371/journal.pcbi.1005609.s002.
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 696 | OA
Lukacisinova, Marta, Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLoS Computational Biology 13 (7). 2017
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2017 | Published | Journal Article | IST-REx-ID: 1027 | OA
Lukacisinova, Marta, and Mark Tobias Bollenbach. “Toward a Quantitative Understanding of Antibiotic Resistance Evolution.” Current Opinion in Biotechnology, vol. 46, Elsevier, 2017, pp. 90–97, doi:10.1016/j.copbio.2017.02.013.
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 1029 | OA
Lukacisin, Martin, Sequence-specific thermodynamic properties of nucleic acids influence both transcriptional pausing and backtracking in yeast. PLoS One 12 (3). 2017
[Published Version] View | Files available | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1218 | OA
Angermayr, Andreas, et al. “Culturing Synechocystis Sp. Strain Pcc 6803 with N2 and CO2 in a Diel Regime Reveals Multiphase Glycogen Dynamics with Low Maintenance Costs.” Applied and Environmental Microbiology, vol. 82, no. 14, American Society for Microbiology, 2016, pp. 4180–89, doi:10.1128/AEM.00256-16.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
2016 | Published | Journal Article | IST-REx-ID: 1552 | OA
Qi, Qin, et al. “The Genomic Basis of Adaptation to the Fitness Cost of Rifampicin Resistance in Pseudomonas Aeruginosa.” Proceedings of the Royal Society of London Series B Biological Sciences, vol. 283, no. 1822, 20152452, Royal Society, The, 2016, doi:10.1098/rspb.2015.2452.
[Published Version] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1154 | OA
Schwarz, Jan, et al. “A Microfluidic Device for Measuring Cell Migration towards Substrate Bound and Soluble Chemokine Gradients.” Scientific Reports, vol. 6, 36440, Nature Publishing Group, 2016, doi:10.1038/srep36440.
[Published Version] View | Files available | DOI
 
2016 | Research Data | IST-REx-ID: 5556 | OA
Lukacisin, Martin, et al. MATLAB Analysis Code for “Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast.” Institute of Science and Technology Austria, 2016, doi:10.15479/AT:ISTA:45.
[Published Version] View | Files available | DOI
 

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