David Brückner

18 Publications

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[18]
2026 | Published | Journal Article | IST-REx-ID: 21282 | OA | PlanS
D. Brückner and G. Tkačik, “Marr’s three levels for embryonic development: Information, dynamical systems, gene networks,” PRX Life, vol. 4. American Physical Society, 2026.
[Published Version] View | Files available | DOI | arXiv
 
[17]
2026 | Published | Journal Article | IST-REx-ID: 22326 | OA | PlanS
C. Y. Zhang, P. Mateu Hoyos, D. Brückner, and G. Tkačik, “Nonlocal decoding of positional and correlational information during development,” Physical Review Letters, vol. 137. American Physical Society, 2026.
[Published Version] View | Files available | DOI
 
[16]
2025 | Published | Journal Article | IST-REx-ID: 21236 | OA | PlanS
T. Brandstätter, E. Brieger, D. Brückner, G. Ladurner, J. O. Rädler, and C. P. Broedersz, “Data-driven theory reveals protrusion and polarity interactions governing collision behavior of distinct motile cells,” PRX Life, vol. 3, no. 3. American Physical Society, 2025.
[Published Version] View | Files available | DOI | arXiv
 
[15]
2025 | Published | Journal Article | IST-REx-ID: 18960
D. Brückner and E. B. Hannezo, “Tissue active matter: Integrating mechanics and signaling into dynamical models,” Cold Spring Harbor Perspectives in Biology, vol. 17, no. 4. Cold Spring Harbor Laboratory Press, 2025.
View | DOI | WoS | PubMed | Europe PMC
 
[14]
2025 | Published | Journal Article | IST-REx-ID: 19404 | OA
S. Tavano et al., “BMP-dependent patterning of ectoderm tissue material properties modulates lateral mesendoderm cell migration during early zebrafish gastrulation,” Cell Reports, vol. 44, no. 3. Elsevier, 2025.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[13]
2025 | Published | Journal Article | IST-REx-ID: 20056 | OA
A. Nabeel et al., “Discovering stochastic dynamical equations from ecological time series data,” The American Naturalist, vol. 205, no. 4. University of Chicago Press, pp. E100–E117, 2025.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC | arXiv
 
[12]
2025 | Published | Journal Article | IST-REx-ID: 20259
Y. Kalukula, M. Luciano, G. Simanov, G. Charras, D. Brückner, and S. Gabriele, “The actin cortex acts as a mechanical memory of morphology in confined migrating cells,” Nature Physics, vol. 21. Springer Nature, pp. 1451–1461, 2025.
View | DOI | WoS
 
[11]
2025 | Published | Journal Article | IST-REx-ID: 20431 | OA
I. C. Fortunato et al., “Single-cell migration along and against confined haptotactic gradients,” Nature Physics, vol. 21. Springer Nature, pp. 1638–1647, 2025.
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 
[10]
2025 | Published | Journal Article | IST-REx-ID: 18807 | OA
S. Rus et al., “Self-organized pattern formation in the developing mouse neural tube by a temporal relay of BMP signaling,” Developmental Cell, vol. 60, no. 4. Elsevier, pp. 567–580, 2025.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[9]
2024 | Published | Journal Article | IST-REx-ID: 15315 | OA
D. Brückner and C. P. Broedersz, “Learning dynamical models of single and collective cell migration: a review,” Reports on Progress in Physics, vol. 87, no. 5. IOP Publishing, 2024.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC | arXiv
 
[8]
2024 | Published | Journal Article | IST-REx-ID: 17123 | OA
D. Brückner and G. Tkačik, “Information content and optimization of self-organized developmental systems,” Proceedings of the National Academy of Sciences of the United States of America, vol. 121, no. 23. National Academy of Sciences, 2024.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[7]
2024 | Research Data Reference | IST-REx-ID: 20121 | OA
A. Nabeel et al., “PyDaddy: A Python Package for Discovering SDEs from Time Series Data.” Zenodo, 2024.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[6]
2024 | Published | Journal Article | IST-REx-ID: 17269 | OA
E. Vercruysse et al., “Geometry-driven migration efficiency of autonomous epithelial cell clusters,” Nature Physics, vol. 20. Springer Nature, pp. 1492–1500, 2024.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 
[5]
2023 | Published | Journal Article | IST-REx-ID: 12818 | OA
T. Brandstätter, D. Brückner, Y. L. Han, R. Alert, M. Guo, and C. P. Broedersz, “Curvature induces active velocity waves in rotating spherical tissues,” Nature Communications, vol. 14. Springer Nature, 2023.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[4]
2023 | Published | Journal Article | IST-REx-ID: 13261 | OA
D. Brückner, H. Chen, L. Barinov, B. Zoller, and T. Gregor, “Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome,” Science, vol. 380, no. 6652. American Association for the Advancement of Science, pp. 1357–1362, 2023.
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 
[3]
2023 | Published | Journal Article | IST-REx-ID: 14827
C. Schwayer and D. Brückner, “Connecting theory and experiment in cell and tissue mechanics,” Journal of Cell Science, vol. 136, no. 24. The Company of Biologists, 2023.
View | DOI | WoS | PubMed | Europe PMC
 
[2]
2022 | Published | Journal Article | IST-REx-ID: 12277 | OA
D. Brückner et al., “Geometry adaptation of protrusion and polarity dynamics in confined cell migration,” Physical Review X, vol. 12, no. 3. American Physical Society, 2022.
[Published Version] View | Files available | DOI | WoS | arXiv
 
[1]
2022 | Published | Journal Article | IST-REx-ID: 10530 | OA
T. Zisis et al., “Disentangling cadherin-mediated cell-cell interactions in collective cancer cell migration,” Biophysical Journal, vol. 121, no. 1. Elsevier, pp. P44-60, 2022.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
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18 Publications

Mark all

[18]
2026 | Published | Journal Article | IST-REx-ID: 21282 | OA | PlanS
D. Brückner and G. Tkačik, “Marr’s three levels for embryonic development: Information, dynamical systems, gene networks,” PRX Life, vol. 4. American Physical Society, 2026.
[Published Version] View | Files available | DOI | arXiv
 
[17]
2026 | Published | Journal Article | IST-REx-ID: 22326 | OA | PlanS
C. Y. Zhang, P. Mateu Hoyos, D. Brückner, and G. Tkačik, “Nonlocal decoding of positional and correlational information during development,” Physical Review Letters, vol. 137. American Physical Society, 2026.
[Published Version] View | Files available | DOI
 
[16]
2025 | Published | Journal Article | IST-REx-ID: 21236 | OA | PlanS
T. Brandstätter, E. Brieger, D. Brückner, G. Ladurner, J. O. Rädler, and C. P. Broedersz, “Data-driven theory reveals protrusion and polarity interactions governing collision behavior of distinct motile cells,” PRX Life, vol. 3, no. 3. American Physical Society, 2025.
[Published Version] View | Files available | DOI | arXiv
 
[15]
2025 | Published | Journal Article | IST-REx-ID: 18960
D. Brückner and E. B. Hannezo, “Tissue active matter: Integrating mechanics and signaling into dynamical models,” Cold Spring Harbor Perspectives in Biology, vol. 17, no. 4. Cold Spring Harbor Laboratory Press, 2025.
View | DOI | WoS | PubMed | Europe PMC
 
[14]
2025 | Published | Journal Article | IST-REx-ID: 19404 | OA
S. Tavano et al., “BMP-dependent patterning of ectoderm tissue material properties modulates lateral mesendoderm cell migration during early zebrafish gastrulation,” Cell Reports, vol. 44, no. 3. Elsevier, 2025.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[13]
2025 | Published | Journal Article | IST-REx-ID: 20056 | OA
A. Nabeel et al., “Discovering stochastic dynamical equations from ecological time series data,” The American Naturalist, vol. 205, no. 4. University of Chicago Press, pp. E100–E117, 2025.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC | arXiv
 
[12]
2025 | Published | Journal Article | IST-REx-ID: 20259
Y. Kalukula, M. Luciano, G. Simanov, G. Charras, D. Brückner, and S. Gabriele, “The actin cortex acts as a mechanical memory of morphology in confined migrating cells,” Nature Physics, vol. 21. Springer Nature, pp. 1451–1461, 2025.
View | DOI | WoS
 
[11]
2025 | Published | Journal Article | IST-REx-ID: 20431 | OA
I. C. Fortunato et al., “Single-cell migration along and against confined haptotactic gradients,” Nature Physics, vol. 21. Springer Nature, pp. 1638–1647, 2025.
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 
[10]
2025 | Published | Journal Article | IST-REx-ID: 18807 | OA
S. Rus et al., “Self-organized pattern formation in the developing mouse neural tube by a temporal relay of BMP signaling,” Developmental Cell, vol. 60, no. 4. Elsevier, pp. 567–580, 2025.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[9]
2024 | Published | Journal Article | IST-REx-ID: 15315 | OA
D. Brückner and C. P. Broedersz, “Learning dynamical models of single and collective cell migration: a review,” Reports on Progress in Physics, vol. 87, no. 5. IOP Publishing, 2024.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC | arXiv
 
[8]
2024 | Published | Journal Article | IST-REx-ID: 17123 | OA
D. Brückner and G. Tkačik, “Information content and optimization of self-organized developmental systems,” Proceedings of the National Academy of Sciences of the United States of America, vol. 121, no. 23. National Academy of Sciences, 2024.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[7]
2024 | Research Data Reference | IST-REx-ID: 20121 | OA
A. Nabeel et al., “PyDaddy: A Python Package for Discovering SDEs from Time Series Data.” Zenodo, 2024.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[6]
2024 | Published | Journal Article | IST-REx-ID: 17269 | OA
E. Vercruysse et al., “Geometry-driven migration efficiency of autonomous epithelial cell clusters,” Nature Physics, vol. 20. Springer Nature, pp. 1492–1500, 2024.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 
[5]
2023 | Published | Journal Article | IST-REx-ID: 12818 | OA
T. Brandstätter, D. Brückner, Y. L. Han, R. Alert, M. Guo, and C. P. Broedersz, “Curvature induces active velocity waves in rotating spherical tissues,” Nature Communications, vol. 14. Springer Nature, 2023.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[4]
2023 | Published | Journal Article | IST-REx-ID: 13261 | OA
D. Brückner, H. Chen, L. Barinov, B. Zoller, and T. Gregor, “Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome,” Science, vol. 380, no. 6652. American Association for the Advancement of Science, pp. 1357–1362, 2023.
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 
[3]
2023 | Published | Journal Article | IST-REx-ID: 14827
C. Schwayer and D. Brückner, “Connecting theory and experiment in cell and tissue mechanics,” Journal of Cell Science, vol. 136, no. 24. The Company of Biologists, 2023.
View | DOI | WoS | PubMed | Europe PMC
 
[2]
2022 | Published | Journal Article | IST-REx-ID: 12277 | OA
D. Brückner et al., “Geometry adaptation of protrusion and polarity dynamics in confined cell migration,” Physical Review X, vol. 12, no. 3. American Physical Society, 2022.
[Published Version] View | Files available | DOI | WoS | arXiv
 
[1]
2022 | Published | Journal Article | IST-REx-ID: 10530 | OA
T. Zisis et al., “Disentangling cadherin-mediated cell-cell interactions in collective cancer cell migration,” Biophysical Journal, vol. 121, no. 1. Elsevier, pp. P44-60, 2022.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
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Search

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Display / Sort

Citation Style: IEEE

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