ISTA Research Explorer

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Calin Guet

Iva Atanaskovic

Athina Diakogianni

Nathalie Gruber

Antoine Loussouarn

Stepan Ovchinnikov

Pavel Payne

Roderich Römhild

Bryan Wu

Puzhen Xia

Tobias Bergmiller

Remy Chait

Rok Grah

Claudia Igler

Kirti Jain

Stephanie Kainrath

Ekaterina Krasnopeeva

Mato Lagator

Moritz Lang

Maria Mateescu

Anna Nagy-Staron

Nela Nikolic

Tiago Paixao

Tatjana Petrov

Maros Pleska

Isabella Tomanek

Nikola Zarevski

138 Publications

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Mascolo, Elia, Reka E Körei, Santiago Herrera-Álvarez, Calin C Guet, Justin Crocker, and Gašper Tkačik. “Long-Term Evolution of Regulatory DNA Sequences. Part 1: Simulations on Global, Biophysically-Realistic Genotype–Phenotype Maps.” Current Opinion in Genetics & Development. Elsevier, 2026. https://doi.org/10.1016/j.gde.2026.102483.

[Published Version] View | DOI | Download Published Version (ext.) | arXiv

Wu, Bryan, and Calin C Guet. “Responsive Lysogeny under Nonproductive Phage Binding.” Evolution. Oxford University Press, 2026. https://doi.org/10.1093/evolut/qpag061.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

Buchholz F, Upterworth LM, Tueffers L, Groth EE, Haas K, Schütz D, Savietto Scholz A, Batra A, Pal S, Banerjee S, Dubey BN, Franzenburg S, Kalsdorf B, Rabe KF, Nurjadi D, Rupp J, Andersson DI, Sondermann H, Bramkamp M, Römhild R, Schulenburg H. 2026. Robust antibiotic sensitization of pathogenic Pseudomonas aeruginosa via negative hysteresis in the cell envelope. Nature Communications. 17, 4487.

[Published Version] View | Files available | DOI

2026 | Published | Thesis | MS | IST-REx-ID: 22399 |

Spasić, Aleksa. “Studying the Evolutionary Systems Biology of the Lac Operon.” Institute of Science and Technology Austria, 2026. https://doi.org/10.15479/AT-ISTA-22399.

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 18936 |

Grah, Rok, Calin C Guet, Gašper Tkačik, and Mato Lagator. “Linking Molecular Mechanisms to Their Evolutionary Consequences: A Primer.” Genetics. Oxford University Press, 2025. https://doi.org/10.1093/genetics/iyae191.

2025 | Research Data | IST-REx-ID: 19294 |

Jain, Kirti, Robert Hauschild, Olga Bochkareva, Roderich Römhild, Gašper Tkačik, and Calin C Guet. “Data for ‘Pulsatile Basal Gene Expression as a Fitness Determinant in Bacteria.’” Institute of Science and Technology Austria, 2025. https://doi.org/10.15479/AT:ISTA:19294.

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 19626 |

Jain, Kirti, Robert Hauschild, Olga Bochkareva, Roderich Römhild, Gašper Tkačik, and Calin C Guet. “Pulsatile Basal Gene Expression as a Fitness Determinant in Bacteria.” Proceedings of the National Academy of Sciences. National Academy of Sciences, 2025. https://doi.org/10.1073/pnas.2413709122.

Antoney, James, Stephanie Kainrath, Joshua G. Dubowsky, F. Hafna Ahmed, Suk Woo Kang, Emily R.R. Mackie, Gustavo Bracho Granado, Tatiana P. Soares Da Costa, Colin J. Jackson, and Harald L Janovjak. “A F420-Dependent Single Domain Chemogenetic Tool for Protein de-Dimerization.” Journal of Molecular Biology. Elsevier, 2025. https://doi.org/10.1016/j.jmb.2025.169184.

2025 | Published | Journal Article | IST-REx-ID: 19857 |

Nikolic, Nela, Maros Pleska, Tobias Bergmiller, and Calin C Guet. “A Bacterial Toxin-Antitoxin System as a Native Defence Element against RNA Phages.” Biology Letters. The Royal Society, 2025. https://doi.org/10.1098/rsbl.2025.0080.

Gallemi, Marçal, Juan C Montesinos López, Nikola Zarevski, Jan Pribyl, Petr Skládal, Edouard B Hannezo, and Eva Benková. “Dual Role of Pectin Methyl Esterase Activity in the Regulation of Plant Cell Wall Biophysical Properties.” Frontiers in Plant Science. Frontiers Media, 2025. https://doi.org/10.3389/fpls.2025.1612366.

2025 | Published | Thesis | PhD | IST-REx-ID: 20470 |

Wu, Bryan. “An Examination on Phages as a Naturally Composable System.” Institute of Science and Technology Austria, 2025. https://doi.org/10.15479/AT-ISTA-20470.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 17325 |

Lo, Wei Chang, Ekaterina Krasnopeeva, and Teuta Pilizota. “Bacterial Electrophysiology.” Annual Review of Biophysics. Annual Reviews, 2024. https://doi.org/10.1146/annurev-biophys-030822-032215.

2023 | Published | Journal Article | IST-REx-ID: 12478 |

Guet, Calin C, L Bruneaux, P Oikonomou, M Aldana, and P Cluzel. “Monitoring Lineages of Growing and Dividing Bacteria Reveals an Inducible Memory of Mar Operon Expression.” Frontiers in Microbiology. Frontiers, 2023. https://doi.org/10.3389/fmicb.2023.1049255.

2022 | Published | Journal Article | IST-REx-ID: 10939 |

Davidović, Anđela, Remy P Chait, Gregory Batt, and Jakob Ruess. “Parameter Inference for Stochastic Biochemical Models from Perturbation Experiments Parallelised at the Single Cell Level.” PLoS Computational Biology. Public Library of Science, 2022. https://doi.org/10.1371/journal.pcbi.1009950.

2022 | Published | Journal Article | IST-REx-ID: 11339 |

Glover, Georgina, Margaritis Voliotis, Urszula Łapińska, Brandon M. Invergo, Darren Soanes, Paul O’Neill, Karen Moore, et al. “Nutrient and Salt Depletion Synergistically Boosts Glucose Metabolism in Individual Escherichia Coli Cells.” Communications Biology. Springer Nature, 2022. https://doi.org/10.1038/s42003-022-03336-6.

2022 | Published | Journal Article | IST-REx-ID: 11713 |

Nikolic, Nela, Martina Sauert, Tanino G. Albanese, and Isabella Moll. “Quantifying Heterologous Gene Expression during Ectopic MazF Production in Escherichia Coli.” BMC Research Notes. Springer Nature, 2022. https://doi.org/10.1186/s13104-022-06061-9.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2022 | Published | Journal Article | IST-REx-ID: 12333 |

Tomanek, Isabella, and Calin C Guet. “Adaptation Dynamics between Copynumber and Point Mutations.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/ELIFE.82240.

2022 | Research Data Reference | IST-REx-ID: 12339 |

Tomanek, Isabella, and Calin C Guet. “Flow Cytometry YFP and CFP Data and Deep Sequencing Data of Populations Evolving in Galactose.” Dryad, 2022. https://doi.org/10.5061/dryad.rfj6q57ds.

[Published Version] View | Files available | DOI | Download Published Version (ext.)

2022 | Published | Journal Article | IST-REx-ID: 10736 |

Lagator, Mato, Srdjan Sarikas, Magdalena Steinrück, David Toledo-Aparicio, Jonathan P Bollback, Calin C Guet, and Gašper Tkačik. “Predicting Bacterial Promoter Function and Evolution from Random Sequences.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/eLife.64543.

2022 | Published | Journal Article | IST-REx-ID: 10812

Römhild, Roderich, Mark Tobias Bollenbach, and Dan I. Andersson. “The Physiology and Genetics of Bacterial Responses to Antibiotic Combinations.” Nature Reviews Microbiology. Springer Nature, 2022. https://doi.org/10.1038/s41579-022-00700-5.

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138 Publications

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Please note that LibreCat no longer supports Internet Explorer versions 8 or 9 (or earlier).

Alumni

138 Publications

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