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129 Publications

2025 | Research Data | IST-REx-ID: 19294 | OA
Jain, Kirti, et al. Data for “Pulsatile Basal Gene Expression as a Fitness Determinant in Bacteria.” Institute of Science and Technology Austria, 2025, doi:10.15479/AT:ISTA:19294.
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2025 | Published | Journal Article | IST-REx-ID: 18936 | OA
Grah, Rok, et al. “Linking Molecular Mechanisms to Their Evolutionary Consequences: A Primer.” Genetics, vol. 229, no. 2, iyae191, Oxford University Press, 2025, doi:10.1093/genetics/iyae191.
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2024 | Published | Journal Article | IST-REx-ID: 17325 | OA
Lo, Wei Chang, et al. “Bacterial Electrophysiology.” Annual Review of Biophysics, vol. 53, Annual Reviews, 2024, pp. 487–510, doi:10.1146/annurev-biophys-030822-032215.
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2023 | Published | Journal Article | IST-REx-ID: 12478 | OA
Guet, Calin C., et al. “Monitoring Lineages of Growing and Dividing Bacteria Reveals an Inducible Memory of Mar Operon Expression.” Frontiers in Microbiology, vol. 14, 1049255, Frontiers, 2023, doi:10.3389/fmicb.2023.1049255.
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2022 | Published | Journal Article | IST-REx-ID: 10939 | OA
Davidović, Anđela, et al. “Parameter Inference for Stochastic Biochemical Models from Perturbation Experiments Parallelised at the Single Cell Level.” PLoS Computational Biology, vol. 18, no. 3, e1009950, Public Library of Science, 2022, doi:10.1371/journal.pcbi.1009950.
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2022 | Published | Journal Article | IST-REx-ID: 11339 | OA
Glover, Georgina, et al. “Nutrient and Salt Depletion Synergistically Boosts Glucose Metabolism in Individual Escherichia Coli Cells.” Communications Biology, vol. 5, 385, Springer Nature, 2022, doi:10.1038/s42003-022-03336-6.
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2022 | Published | Journal Article | IST-REx-ID: 10812
Römhild, Roderich, et al. “The Physiology and Genetics of Bacterial Responses to Antibiotic Combinations.” Nature Reviews Microbiology, vol. 20, Springer Nature, 2022, pp. 478–90, doi:10.1038/s41579-022-00700-5.
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2022 | Published | Journal Article | IST-REx-ID: 12333 | OA
Tomanek, Isabella, and Calin C. Guet. “Adaptation Dynamics between Copynumber and Point Mutations.” ELife, vol. 11, e82240, eLife Sciences Publications, 2022, doi:10.7554/ELIFE.82240.
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2022 | Research Data Reference | IST-REx-ID: 12339 | OA
Tomanek, Isabella, and Calin C. Guet. Flow Cytometry YFP and CFP Data and Deep Sequencing Data of Populations Evolving in Galactose. Dryad, 2022, doi:10.5061/dryad.rfj6q57ds.
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2022 | Published | Journal Article | IST-REx-ID: 11713 | OA
Nikolic, Nela, et al. “Quantifying Heterologous Gene Expression during Ectopic MazF Production in Escherichia Coli.” BMC Research Notes, vol. 15, 173, Springer Nature, 2022, doi:10.1186/s13104-022-06061-9.
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2022 | Published | Journal Article | IST-REx-ID: 11843 | OA
Tomasek, Kathrin, et al. “Type 1 Piliated Uropathogenic Escherichia Coli Hijack the Host Immune Response by Binding to CD14.” ELife, vol. 11, e78995, eLife Sciences Publications, 2022, doi:10.7554/eLife.78995.
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2022 | Published | Journal Article | IST-REx-ID: 10736 | OA
Lagator, Mato, et al. “Predicting Bacterial Promoter Function and Evolution from Random Sequences.” ELife, vol. 11, e64543, eLife Sciences Publications, 2022, doi:10.7554/eLife.64543.
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2021 | Published | Journal Article | IST-REx-ID: 15270 | OA
Le, Dai, et al. “Active Efflux Leads to Heterogeneous Dissipation of Proton Motive Force by Protonophores in Bacteria.” MBio, vol. 12, no. 4, 676, American Society for Microbiology, 2021, doi:10.1128/mbio.00676-21.
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2021 | Published | Journal Article | IST-REx-ID: 10363 | OA
Lee, Jungmin, et al. “Rational Engineering of an Erythropoietin Fusion Protein to Treat Hypoxia.” Protein Engineering, Design and Selection, vol. 34, gzab025, Oxford University Press, 2021, doi:10.1093/protein/gzab025.
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2021 | Published | Journal Article | IST-REx-ID: 9746 | OA
Batra, Aditi, et al. “High Potency of Sequential Therapy with Only Beta-Lactam Antibiotics.” ELife, vol. 10, e68876, eLife Sciences Publications, 2021, doi:10.7554/elife.68876.
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2021 | Published | Journal Article | IST-REx-ID: 9046 | OA
Römhild, Roderich, Mechanisms and therapeutic potential of collateral sensitivity to antibiotics. PLoS Pathogens 17 (1). 2021
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2021 | Published | Journal Article | IST-REx-ID: 9822 | OA
Zisis, Themistoklis, Sequential and switchable patterning for studying cellular processes under spatiotemporal control. ACS Applied Materials and Interfaces 13 (30). 2021
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2021 | Published | Journal Article | IST-REx-ID: 9647 | OA
Petrov, Tatjana, et al. “Long Lived Transients in Gene Regulation.” Theoretical Computer Science, vol. 893, Elsevier, 2021, pp. 1–16, doi:10.1016/j.tcs.2021.05.023.
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2021 | Published | Journal Article | IST-REx-ID: 9283 | OA
Nagy-Staron, Anna A., et al. “Local Genetic Context Shapes the Function of a Gene Regulatory Network.” ELife, vol. 10, e65993, eLife Sciences Publications, 2021, doi:10.7554/elife.65993.
[Published Version] View | Files available | DOI | WoS
 
2021 | Published | Thesis | IST-REx-ID: 10307 | OA
Tomasek, Kathrin. Pathogenic Escherichia Coli Hijack the Host Immune Response. Institute of Science and Technology Austria, 2021, doi:10.15479/at:ista:10307.
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