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199 Publications
2024 | Published | Journal Article | IST-REx-ID: 18525 | 
N. Ruzickova, M. Hledik, and G. Tkačik, “Quantitative omnigenic model discovers interpretable genome-wide associations,” Proceedings of the National Academy of Sciences of the United States of America, vol. 121, no. 44. National Academy of Sciences, 2024.
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2024 | Published | Journal Article | IST-REx-ID: 18307 |
S. Rella, Y. A. Kulikova, A. Minnegalieva, and F. Kondrashov, “Complex vaccination strategies prevent the emergence of vaccine resistance,” Evolution: International journal of organic evolution, vol. 78, no. 10. Oxford University Press, pp. 1722–1738, 2024.
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2024 | Published | Journal Article | IST-REx-ID: 18902 |
M. Zagorski et al., “Assessing the precision of morphogen gradients in neural tube development,” Nature Communications, vol. 15. Springer Nature, 2024.
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2023 | Published | Journal Article | IST-REx-ID: 13127 |
B. E. Casillas Perez, K. Bodova, A. V. Grasse, G. Tkačik, and S. Cremer, “Dynamic pathogen detection and social feedback shape collective hygiene in ants,” Nature Communications, vol. 14. Springer Nature, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 12487 |
S. Scarpetta et al., “Criticality of neuronal avalanches in human sleep and their relationship with sleep macro- and micro-architecture,” iScience, vol. 26, no. 10. Elsevier, p. 107840, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 14402 |
F. Lombardi et al., “Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state,” Cell Reports, vol. 42, no. 10. Elsevier, 2023.
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2023 | Published | Conference Abstract | IST-REx-ID: 14862 |
S. Rella, Y. Kulikova, A. Minnegalieva, and F. Kondrashov, “Complex vaccination strategies prevent the emergence of vaccine resistance,” in European Journal of Public Health, 2023, vol. 33, no. Supplement_2.
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2023 | Published | Journal Article | IST-REx-ID: 12762 |
F. Lombardi, S. Pepic, O. Shriki, G. Tkačik, and D. De Martino, “Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain,” Nature Computational Science, vol. 3. Springer Nature, pp. 254–263, 2023.
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| arXiv
2023 | Published | Journal Article | IST-REx-ID: 14515 |
M. Reinhardt, G. Tkačik, and P. R. Ten Wolde, “Path weight sampling: Exact Monte Carlo computation of the mutual information between stochastic trajectories,” Physical Review X, vol. 13, no. 4. American Physical Society, 2023.
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2023 | Published | Journal Article | IST-REx-ID: 14656 |
M. Nardin, J. L. Csicsvari, G. Tkačik, and C. Savin, “The structure of hippocampal CA1 interactions optimizes spatial coding across experience,” The Journal of Neuroscience, vol. 43, no. 48. Society for Neuroscience, pp. 8140–8156, 2023.
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2022 | Published | Journal Article | IST-REx-ID: 11638 |
V. Ngampruetikorn, V. Sachdeva, J. Torrence, J. Humplik, D. J. Schwab, and S. E. Palmer, “Inferring couplings in networks across order-disorder phase transitions,” Physical Review Research, vol. 4, no. 2. American Physical Society, 2022.
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2022 | Draft | Preprint | IST-REx-ID: 10821 |
F. Lombardi et al., “Alpha rhythm induces attenuation-amplification dynamics in neural activity cascades,” bioRxiv. Cold Spring Harbor Laboratory.
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2022 | Published | Journal Article | IST-REx-ID: 10736 |
M. Lagator et al., “Predicting bacterial promoter function and evolution from random sequences,” eLife, vol. 11. eLife Sciences Publications, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12081 |
M. Hledik, N. H. Barton, and G. Tkačik, “Accumulation and maintenance of information in evolution,” Proceedings of the National Academy of Sciences of the United States of America, vol. 119, no. 36. National Academy of Sciences, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12156 |
B. Zoller, T. Gregor, and G. Tkačik, “Eukaryotic gene regulation at equilibrium, or non?,” Current Opinion in Systems Biology, vol. 31, no. 9. Elsevier, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 10530 |
T. Zisis et al., “Disentangling cadherin-mediated cell-cell interactions in collective cancer cell migration,” Biophysical Journal, vol. 121, no. 1. Elsevier, pp. P44-60, 2022.
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2022 | Published | Journal Article | IST-REx-ID: 12332 |
W. F. Mlynarski and G. Tkačik, “Efficient coding theory of dynamic attentional modulation,” PLoS Biology, vol. 20, no. 12. Public Library of Science, p. e3001889, 2022.
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2021 | Published | Journal Article | IST-REx-ID: 10535 |
K. Bodova, E. Szep, and N. H. Barton, “Dynamic maximum entropy provides accurate approximation of structured population dynamics,” PLoS Computational Biology, vol. 17, no. 12. Public Library of Science, 2021.
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| arXiv
2021 | Submitted | Preprint | IST-REx-ID: 10579 |
B. Kavcic and G. Tkačik, “Token-driven totally asymmetric simple exclusion process,” arXiv. .
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2021 | Published | Journal Article | IST-REx-ID: 9828 |
M. Gabrielaitis, “Fast and accurate amplitude demodulation of wideband signals,” IEEE Transactions on Signal Processing, vol. 69. Institute of Electrical and Electronics Engineers, pp. 4039–4054, 2021.
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