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203 Publications
2020 |
Published |
Journal Article |
IST-REx-ID: 7490 |
M. Narasimhan et al., “Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants,” eLife, vol. 9. eLife Sciences Publications, 2020.
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2020 |
Published |
Journal Article |
IST-REx-ID: 7569 |
R. Grah and T. Friedlander, “The relation between crosstalk and gene regulation form revisited,” PLOS Computational Biology, vol. 16, no. 2. Public Library of Science, 2020.
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2020 |
Published |
Thesis | PhD |
IST-REx-ID: 8155 |
R. Grah, “Gene regulation across scales – how biophysical constraints shape evolution,” Institute of Science and Technology Austria, 2020.
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2020 |
Published |
Preprint |
IST-REx-ID: 7675 |
R. Grah, B. Zoller, and G. Tkačik, “Normative models of enhancer function,” bioRxiv. Cold Spring Harbor Laboratory, 2020.
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2020 |
Published |
Journal Article |
IST-REx-ID: 7656 |
M. J. Berry and G. Tkačik, “Clustering of neural activity: A design principle for population codes,” Frontiers in Computational Neuroscience, vol. 14. Frontiers, 2020.
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2020 |
Published |
Thesis | PhD |
IST-REx-ID: 8657 |
B. Kavcic, “Perturbations of protein synthesis: from antibiotics to genetics and physiology,” Institute of Science and Technology Austria, 2020.
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2020 |
Published |
Journal Article |
IST-REx-ID: 8250 |
B. Kavcic, G. Tkačik, and M. T. Bollenbach, “Mechanisms of drug interactions between translation-inhibiting antibiotics,” Nature Communications, vol. 11. Springer Nature, 2020.
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2020 |
Published |
Preprint |
IST-REx-ID: 7673 |
B. Kavcic, G. Tkačik, and M. T. Bollenbach, “A minimal biophysical model of combined antibiotic action,” bioRxiv. Cold Spring Harbor Laboratory, 2020.
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2020 |
Published |
Journal Article |
IST-REx-ID: 7652 |
I. Tomanek et al., “Gene amplification as a form of population-level gene expression regulation,” Nature Ecology & Evolution, vol. 4, no. 4. Springer Nature, pp. 612–625, 2020.
[Submitted Version]
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2019 |
Published |
Book Chapter |
IST-REx-ID: 19988 |
A. De Martino, D. De Martino, and E. Marinari, “The Essential Role of Thermodynamics in Metabolic Network Modeling: Physical Insights and Computational Challenges,” in Chemical Kinetics, World Scientific Publishing, 2019, pp. 455–471.
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| arXiv
2019 |
Published |
Journal Article |
IST-REx-ID: 196 |
M. Lang and M. Shkolnikov, “Harmonic dynamics of the Abelian sandpile,” Proceedings of the National Academy of Sciences of the United States of America, vol. 116, no. 8. National Academy of Sciences, pp. 2821–2830, 2019.
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| arXiv
2019 |
Research Data Reference |
IST-REx-ID: 9786
J. Ruess, M. Pleska, C. C. Guet, and G. Tkačik, “Supporting text and results.” Public Library of Science, 2019.
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2019 |
Published |
Journal Article |
IST-REx-ID: 5817 |
B. Kavcic, A. Sakashita, H. Noguchi, and P. Ziherl, “Limiting shapes of confined lipid vesicles,” Soft Matter, vol. 15, no. 4. Royal Society of Chemistry, pp. 602–614, 2019.
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2019 |
Published |
Journal Article |
IST-REx-ID: 5945 |
M. D. Petkova, G. Tkačik, W. Bialek, E. F. Wieschaus, and T. Gregor, “Optimal decoding of cellular identities in a genetic network,” Cell, vol. 176, no. 4. Cell Press, p. 844–855.e15, 2019.
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2019 |
Published |
Journal Article |
IST-REx-ID: 6046 |
K. Mitosch, G. Rieckh, and M. T. Bollenbach, “Temporal order and precision of complex stress responses in individual bacteria,” Molecular systems biology, vol. 15, no. 2. Embo Press, 2019.
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2019 |
Published |
Journal Article |
IST-REx-ID: 6049 |
D. De Martino, “Feedback-induced self-oscillations in large interacting systems subjected to phase transitions,” Journal of Physics A: Mathematical and Theoretical, vol. 52, no. 4. IOP Publishing, 2019.
[Published Version]
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2019 |
Published |
Journal Article |
IST-REx-ID: 6090 |
M. Carballo-Pacheco et al., “Receptor crosstalk improves concentration sensing of multiple ligands,” Physical Review E, vol. 99, no. 2. American Physical Society, 2019.
[Preprint]
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2019 |
Published |
Journal Article |
IST-REx-ID: 6784 |
J. Ruess, M. Pleska, C. C. Guet, and G. Tkačik, “Molecular noise of innate immunity shapes bacteria-phage ecologies,” PLoS Computational Biology, vol. 15, no. 7. Public Library of Science, 2019.
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2019 |
Published |
Journal Article |
IST-REx-ID: 7103 |
J. W. J. L. Wang, F. Lombardi, X. Zhang, C. Anaclet, and P. C. Ivanov, “Non-equilibrium critical dynamics of bursts in θ and δ rhythms as fundamental characteristic of sleep and wake micro-architecture,” PLoS Computational Biology, vol. 15, no. 11. Public Library of Science, 2019.
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2019 |
Published |
Journal Article |
IST-REx-ID: 7422 |
T. R. Sokolowski et al., “eGFRD in all dimensions,” The Journal of Chemical Physics, vol. 150, no. 5. AIP Publishing, 2019.
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