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Gasper Tkacik

Sofia Backlund

Alexis Benichou

Céline Camila Coraly Bräutigam

Pietro Chiarantoni

Athina Diakogianni

Krishnan Iyer

Reka Borbely

Björn Kscheschinski

Teemu Kuosmanen

Gabor Lengyel

Ekaterina Maksimova

Elia Mascolo

Pablo Mateu Hoyos

Anuj Patel

Tetiana Rabiichuk

Simon Rella

Julian Renaud

Puzhen Xia

Bahti Zakirov

Alex Chen Yi Zhang

Tereza Zuskinova

Gabriel Mitchell

Anna Andersson

Katarina Bodova

Vicent Botella Soler

David Brückner

Sarah Cepeda Humerez

Remy Chait

Matthew Chalk

Heloisa Chiossi

Daniele De Martino

Tamar Friedlander

Mantas Gabrielaitis

Aditya Gilra

Rok Grah

Michal Hledik

Jan Humplik

Bor Kavcic

Moritz Lang

Anna Levina (Martius)

Fabrizio Lombardi

Georg Martius

Roshan Prizak

Georg Rieckh

Jakob Ruess

Natalia Ruzickova

Cristina Savin

Sreyam Sengupta

Thomas Sokolowski



207 Publications

2020 | Published | Journal Article | IST-REx-ID: 8955 | OA
Network physiology of cortico–muscular interactions
R. Rizzo, X. Zhang, J.W.J.L. Wang, F. Lombardi, P.C. Ivanov, Frontiers in Physiology 11 (2020).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Published | Journal Article | IST-REx-ID: 9000 | OA
Nonequilibrium models of optimal enhancer function
R. Grah, B. Zoller, G. Tkačik, Proceedings of the National Academy of Sciences of the United States of America 117 (2020) 31614–31622.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Research Data Reference | IST-REx-ID: 9776
Supporting information
R. Grah, T. Friedlander, (2020).
[Published Version] View | Files available | DOI
 
2020 | Research Data Reference | IST-REx-ID: 9777 | OA
Maximizing crosstalk
R. Grah, T. Friedlander, (2020).
View | Files available | DOI | Download None (ext.)
 
2020 | Research Data Reference | IST-REx-ID: 9779
Distribution of crosstalk values
R. Grah, T. Friedlander, (2020).
[Published Version] View | Files available | DOI
 
2020 | Research Data | IST-REx-ID: 7383 | OA
Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation
R. Grah, (2020).
[Published Version] View | Files available | DOI
 
2020 | Published | Journal Article | IST-REx-ID: 7490 | OA
Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants
M. Narasimhan, A.J. Johnson, R. Prizak, W. Kaufmann, S. Tan, B.E. Casillas Perez, J. Friml, ELife 9 (2020).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Published | Thesis | PhD | IST-REx-ID: 8155 | OA
Gene regulation across scales – how biophysical constraints shape evolution
R. Grah, Gene Regulation across Scales – How Biophysical Constraints Shape Evolution, Institute of Science and Technology Austria, 2020.
[Published Version] View | Files available | DOI
 
2020 | Published | Preprint | IST-REx-ID: 7675 | OA
Normative models of enhancer function
R. Grah, B. Zoller, G. Tkačik, BioRxiv (2020).
[Preprint] View | Files available | DOI | Download Preprint (ext.) | bioRxiv
 
2020 | Published | Journal Article | IST-REx-ID: 7652 | OA
Gene amplification as a form of population-level gene expression regulation
I. Tomanek, R. Grah, M. Lagator, A.M.C. Andersson, J.P. Bollback, G. Tkačik, C.C. Guet, Nature Ecology & Evolution 4 (2020) 612–625.
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Published | Thesis | PhD | IST-REx-ID: 8657 | OA
Perturbations of protein synthesis: from antibiotics to genetics and physiology
B. Kavcic, Perturbations of Protein Synthesis: From Antibiotics to Genetics and Physiology, Institute of Science and Technology Austria, 2020.
[Published Version] View | Files available | DOI
 
2020 | Published | Journal Article | IST-REx-ID: 8250 | OA
Mechanisms of drug interactions between translation-inhibiting antibiotics
B. Kavcic, G. Tkačik, M.T. Bollenbach, Nature Communications 11 (2020).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
earlier version | 2020 | Published | Preprint | IST-REx-ID: 7673 | OA
A minimal biophysical model of combined antibiotic action
B. Kavcic, G. Tkačik, M.T. Bollenbach, BioRxiv (2020).
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
2019 | Published | Journal Article | IST-REx-ID: 196 | OA
Harmonic dynamics of the Abelian sandpile
M. Lang, M. Shkolnikov, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 2821–2830.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC | arXiv
 
2019 | Published | Journal Article | IST-REx-ID: 5817 | OA
Limiting shapes of confined lipid vesicles
B. Kavcic, A. Sakashita, H. Noguchi, P. Ziherl, Soft Matter 15 (2019) 602–614.
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2019 | Published | Journal Article | IST-REx-ID: 5945 | OA
Optimal decoding of cellular identities in a genetic network
M.D. Petkova, G. Tkačik, W. Bialek, E.F. Wieschaus, T. Gregor, Cell 176 (2019) 844–855.e15.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS | PubMed | Europe PMC
 
2019 | Published | Journal Article | IST-REx-ID: 6046 | OA
Temporal order and precision of complex stress responses in individual bacteria
K. Mitosch, G. Rieckh, M.T. Bollenbach, Molecular Systems Biology 15 (2019).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2019 | Published | Journal Article | IST-REx-ID: 6049 | OA
Feedback-induced self-oscillations in large interacting systems subjected to phase transitions
D. De Martino, Journal of Physics A: Mathematical and Theoretical 52 (2019).
[Published Version] View | Files available | DOI | WoS
 
2019 | Published | Thesis | PhD | IST-REx-ID: 6071 | OA
Coevolution of transcription factors and their binding sites in sequence space
R. Prizak, Coevolution of Transcription Factors and Their Binding Sites in Sequence Space, Institute of Science and Technology Austria, 2019.
[Published Version] View | Files available | DOI
 
2019 | Published | Journal Article | IST-REx-ID: 6090 | OA
Receptor crosstalk improves concentration sensing of multiple ligands
M. Carballo-Pacheco, J. Desponds, T. Gavrilchenko, A. Mayer, R. Prizak, G. Reddy, I. Nemenman, T. Mora, Physical Review E 99 (2019).
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 

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