Please note that LibreCat no longer supports Internet Explorer versions 8 or 9 (or earlier).
We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.
196 Publications
2021 | Published | Journal Article | IST-REx-ID: 10535 | 
Bodova, Katarina, Eniko Szep, and Nicholas H Barton. “Dynamic Maximum Entropy Provides Accurate Approximation of Structured Population Dynamics.” PLoS Computational Biology. Public Library of Science, 2021. https://doi.org/10.1371/journal.pcbi.1009661.
[Published Version]
View
| Files available
| DOI
| PubMed | Europe PMC
| arXiv
2021 | Submitted | Preprint | IST-REx-ID: 10579 |
Kavcic, Bor, and Gašper Tkačik. “Token-Driven Totally Asymmetric Simple Exclusion Process.” ArXiv, n.d. https://doi.org/10.48550/arXiv.2112.13558.
[Preprint]
View
| DOI
| Download Preprint (ext.)
| arXiv
2021 | Published | Journal Article | IST-REx-ID: 9828 |
Gabrielaitis, Mantas. “Fast and Accurate Amplitude Demodulation of Wideband Signals.” IEEE Transactions on Signal Processing. Institute of Electrical and Electronics Engineers, 2021. https://doi.org/10.1109/TSP.2021.3087899.
[Preprint]
View
| DOI
| Download Preprint (ext.)
| WoS
| arXiv
2021 | Published | Journal Article | IST-REx-ID: 9362 |
Chalk, Matthew J, Gašper Tkačik, and Olivier Marre. “Inferring the Function Performed by a Recurrent Neural Network.” PLoS ONE. Public Library of Science, 2021. https://doi.org/10.1371/journal.pone.0248940.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2021 | Published | Journal Article | IST-REx-ID: 9226 |
Tkačik, Gašper, and Thomas Gregor. “The Many Bits of Positional Information.” Development. The Company of Biologists, 2021. https://doi.org/10.1242/dev.176065.
[Published Version]
View
| DOI
| Download Published Version (ext.)
| WoS
| PubMed | Europe PMC
2021 | Published | Journal Article | IST-REx-ID: 9822 |
Zisis, Themistoklis, Sequential and switchable patterning for studying cellular processes under spatiotemporal control. ACS Applied Materials and Interfaces 13 (30). 2021
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2021 | Published | Journal Article | IST-REx-ID: 7463 |
Lombardi, Fabrizio, Oren Shriki, Hans J Herrmann, and Lucilla de Arcangelis. “Long-Range Temporal Correlations in the Broadband Resting State Activity of the Human Brain Revealed by Neuronal Avalanches.” Neurocomputing. Elsevier, 2021. https://doi.org/10.1016/j.neucom.2020.05.126.
[Preprint]
View
| DOI
| Download Preprint (ext.)
| WoS
2021 | Submitted | Preprint | IST-REx-ID: 10912 |
Lombardi, Fabrizio, Selver Pepic, Oren Shriki, Gašper Tkačik, and Daniele De Martino. “Quantifying the Coexistence of Neuronal Oscillations and Avalanches.” arXiv, n.d. https://doi.org/10.48550/ARXIV.2108.06686.
[Preprint]
View
| DOI
| Download Preprint (ext.)
| arXiv
2021 | Published | Journal Article | IST-REx-ID: 8997 |
Kavcic, Bor, Gašper Tkačik, and Mark Tobias Bollenbach. “Minimal Biophysical Model of Combined Antibiotic Action.” PLOS Computational Biology. Public Library of Science, 2021. https://doi.org/10.1371/journal.pcbi.1008529.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2021 | Published | Journal Article | IST-REx-ID: 9283 |
Nagy-Staron, Anna A, Kathrin Tomasek, Caroline Caruso Carter, Elisabeth Sonnleitner, Bor Kavcic, Tiago Paixão, and Calin C Guet. “Local Genetic Context Shapes the Function of a Gene Regulatory Network.” ELife. eLife Sciences Publications, 2021. https://doi.org/10.7554/elife.65993.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2021 | Published | Journal Article | IST-REx-ID: 7553 |
Mlynarski, Wiktor F, Michal Hledik, Thomas R Sokolowski, and Gašper Tkačik. “Statistical Analysis and Optimality of Neural Systems.” Neuron. Cell Press, 2021. https://doi.org/10.1016/j.neuron.2021.01.020.
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
| WoS
| PubMed | Europe PMC
2021 | Published | Journal Article | IST-REx-ID: 9439 |
Mlynarski, Wiktor F, and Ann M. Hermundstad. “Efficient and Adaptive Sensory Codes.” Nature Neuroscience. Springer Nature, 2021. https://doi.org/10.1038/s41593-021-00846-0.
[Preprint]
View
| DOI
| Download Preprint (ext.)
| WoS
| PubMed | Europe PMC
2021 | Draft | Preprint | IST-REx-ID: 10077 |
Nardin, Michele, Jozsef L Csicsvari, Gašper Tkačik, and Cristina Savin. “The Structure of Hippocampal CA1 Interactions Optimizes Spatial Coding across Experience.” BioRxiv. Cold Spring Harbor Laboratory, n.d. https://doi.org/10.1101/2021.09.28.460602.
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
2020 | Published | Journal Article | IST-REx-ID: 7656 |
Berry, Michael J., and Gašper Tkačik. “Clustering of Neural Activity: A Design Principle for Population Codes.” Frontiers in Computational Neuroscience. Frontiers, 2020. https://doi.org/10.3389/fncom.2020.00020.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2020 | Research Data | IST-REx-ID: 8097 |
Kavcic, Bor. “Analysis Scripts and Research Data for the Paper ‘Mechanisms of Drug Interactions between Translation-Inhibiting Antibiotics.’” Institute of Science and Technology Austria, 2020. https://doi.org/10.15479/AT:ISTA:8097.
[Published Version]
View
| Files available
| DOI
2020 | Published | Journal Article | IST-REx-ID: 8698 |
Maoz, Ori, Learning probabilistic neural representations with randomly connected circuits. Proceedings of the National Academy of Sciences of the United States of America 117 (40). 2020
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2020 | Published | Preprint | IST-REx-ID: 7675 |
Grah, Rok, Benjamin Zoller, and Gašper Tkačik. “Normative Models of Enhancer Function.” BioRxiv. Cold Spring Harbor Laboratory, 2020. https://doi.org/10.1101/2020.04.08.029405.
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
2020 | Published | Journal Article | IST-REx-ID: 8955 |
Rizzo, Rossella, Xiyun Zhang, Jilin W.J.L. Wang, Fabrizio Lombardi, and Plamen Ch Ivanov. “Network Physiology of Cortico–Muscular Interactions.” Frontiers in Physiology. Frontiers, 2020. https://doi.org/10.3389/fphys.2020.558070.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2020 | Published | Journal Article | IST-REx-ID: 8084 |
Lombardi, Fabrizio, Manuel Gómez-Extremera, Pedro Bernaola-Galván, Ramalingam Vetrivelan, Clifford B. Saper, Thomas E. Scammell, and Plamen Ch. Ivanov. “Critical Dynamics and Coupling in Bursts of Cortical Rhythms Indicate Non-Homeostatic Mechanism for Sleep-Stage Transitions and Dual Role of VLPO Neurons in Both Sleep and Wake.” Journal of Neuroscience. Society for Neuroscience, 2020. https://doi.org/10.1523/jneurosci.1278-19.2019.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2020 | Published | Journal Article | IST-REx-ID: 7490 |
Narasimhan, Madhumitha, Alexander J Johnson, Roshan Prizak, Walter Kaufmann, Shutang Tan, Barbara E Casillas Perez, and Jiří Friml. “Evolutionarily Unique Mechanistic Framework of Clathrin-Mediated Endocytosis in Plants.” ELife. eLife Sciences Publications, 2020. https://doi.org/10.7554/eLife.52067.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC