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197 Publications
2021 | Published | Journal Article | IST-REx-ID: 7463 | 
Lombardi F, Shriki O, Herrmann HJ, de Arcangelis L. Long-range temporal correlations in the broadband resting state activity of the human brain revealed by neuronal avalanches. Neurocomputing. 2021;461:657-666. doi:10.1016/j.neucom.2020.05.126
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| WoS
2021 | Submitted | Preprint | IST-REx-ID: 10912 |
Lombardi F, Pepic S, Shriki O, Tkačik G, De Martino D. Quantifying the coexistence of neuronal oscillations and avalanches. doi:10.48550/ARXIV.2108.06686
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2021 | Published | Journal Article | IST-REx-ID: 8997 |
Kavcic B, Tkačik G, Bollenbach MT. Minimal biophysical model of combined antibiotic action. PLOS Computational Biology. 2021;17. doi:10.1371/journal.pcbi.1008529
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2021 | Published | Journal Article | IST-REx-ID: 9283 |
Nagy-Staron AA, Tomasek K, Caruso Carter C, et al. Local genetic context shapes the function of a gene regulatory network. eLife. 2021;10. doi:10.7554/elife.65993
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2021 | Published | Journal Article | IST-REx-ID: 7553 |
Mlynarski WF, Hledik M, Sokolowski TR, Tkačik G. Statistical analysis and optimality of neural systems. Neuron. 2021;109(7):1227-1241.e5. doi:10.1016/j.neuron.2021.01.020
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2021 | Published | Journal Article | IST-REx-ID: 9439 |
Mlynarski WF, Hermundstad AM. Efficient and adaptive sensory codes. Nature Neuroscience. 2021;24:998-1009. doi:10.1038/s41593-021-00846-0
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2021 | Published | Journal Article | IST-REx-ID: 9822 |
Zisis T, Schwarz J, Balles M, et al. Sequential and switchable patterning for studying cellular processes under spatiotemporal control. ACS Applied Materials and Interfaces. 2021;13(30):35545–35560. doi:10.1021/acsami.1c09850
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2021 | Draft | Preprint | IST-REx-ID: 10077 |
Nardin M, Csicsvari JL, Tkačik G, Savin C. The structure of hippocampal CA1 interactions optimizes spatial coding across experience. bioRxiv. doi:10.1101/2021.09.28.460602
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2020 | Published | Journal Article | IST-REx-ID: 7656 |
Berry MJ, Tkačik G. Clustering of neural activity: A design principle for population codes. Frontiers in Computational Neuroscience. 2020;14. doi:10.3389/fncom.2020.00020
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2020 | Research Data | IST-REx-ID: 8097 |
Kavcic B. Analysis scripts and research data for the paper “Mechanisms of drug interactions between translation-inhibiting antibiotics.” 2020. doi:10.15479/AT:ISTA:8097
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2020 | Published | Preprint | IST-REx-ID: 7675 |
Grah R, Zoller B, Tkačik G. Normative models of enhancer function. bioRxiv. 2020. doi:10.1101/2020.04.08.029405
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2020 | Published | Journal Article | IST-REx-ID: 8955 |
Rizzo R, Zhang X, Wang JWJL, Lombardi F, Ivanov PC. Network physiology of cortico–muscular interactions. Frontiers in Physiology. 2020;11. doi:10.3389/fphys.2020.558070
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2020 | Published | Journal Article | IST-REx-ID: 8084 |
Lombardi F, Gómez-Extremera M, Bernaola-Galván P, et al. Critical dynamics and coupling in bursts of cortical rhythms indicate non-homeostatic mechanism for sleep-stage transitions and dual role of VLPO neurons in both sleep and wake. Journal of Neuroscience. 2020;40(1):171-190. doi:10.1523/jneurosci.1278-19.2019
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2020 | Published | Journal Article | IST-REx-ID: 7490 |
Narasimhan M, Johnson AJ, Prizak R, et al. Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants. eLife. 2020;9. doi:10.7554/eLife.52067
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2020 | Published | Journal Article | IST-REx-ID: 9000 |
Grah R, Zoller B, Tkačik G. Nonequilibrium models of optimal enhancer function. Proceedings of the National Academy of Sciences of the United States of America. 2020;117(50):31614-31622. doi:10.1073/pnas.2006731117
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2020 | Research Data | IST-REx-ID: 8930 |
Kavcic B. Analysis scripts and research data for the paper “Minimal biophysical model of combined antibiotic action.” 2020. doi:10.15479/AT:ISTA:8930
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2020 | Published | Thesis | IST-REx-ID: 8155 |
Grah R. Gene regulation across scales – how biophysical constraints shape evolution. 2020. doi:10.15479/AT:ISTA:8155
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2020 | Research Data | IST-REx-ID: 7383 |
Grah R. Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation. 2020. doi:10.15479/AT:ISTA:7383
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2020 | Published | Journal Article | IST-REx-ID: 7569 |
Grah R, Friedlander T. The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. 2020;16(2). doi:10.1371/journal.pcbi.1007642
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2020 | Research Data Reference | IST-REx-ID: 9777 |
Grah R, Friedlander T. Maximizing crosstalk. 2020. doi:10.1371/journal.pcbi.1007642.s002
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