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196 Publications

2020 | Published | Journal Article | IST-REx-ID: 8698 | OA
Maoz, Ori, Learning probabilistic neural representations with randomly connected circuits. Proceedings of the National Academy of Sciences of the United States of America 117 (40). 2020
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2020 | Published | Preprint | IST-REx-ID: 7675 | OA
Grah R, Zoller B, Tkačik G. 2020. Normative models of enhancer function. bioRxiv, 10.1101/2020.04.08.029405.
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2020 | Published | Journal Article | IST-REx-ID: 8955 | OA
Rizzo R, Zhang X, Wang JWJL, Lombardi F, Ivanov PC. 2020. Network physiology of cortico–muscular interactions. Frontiers in Physiology. 11, 558070.
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2020 | Published | Journal Article | IST-REx-ID: 8084 | OA
Lombardi F, Gómez-Extremera M, Bernaola-Galván P, Vetrivelan R, Saper CB, Scammell TE, Ivanov PC. 2020. Critical dynamics and coupling in bursts of cortical rhythms indicate non-homeostatic mechanism for sleep-stage transitions and dual role of VLPO neurons in both sleep and wake. Journal of Neuroscience. 40(1), 171–190.
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2020 | Published | Journal Article | IST-REx-ID: 7490 | OA
Narasimhan M, Johnson AJ, Prizak R, Kaufmann W, Tan S, Casillas Perez BE, Friml J. 2020. Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants. eLife. 9, e52067.
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2020 | Published | Journal Article | IST-REx-ID: 9000 | OA
Grah R, Zoller B, Tkačik G. 2020. Nonequilibrium models of optimal enhancer function. Proceedings of the National Academy of Sciences of the United States of America. 117(50), 31614–31622.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2020 | Research Data | IST-REx-ID: 8930 | OA
Kavcic B. 2020. Analysis scripts and research data for the paper ‘Minimal biophysical model of combined antibiotic action’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:8930.
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2020 | Published | Thesis | IST-REx-ID: 8155 | OA
Grah R. 2020. Gene regulation across scales – how biophysical constraints shape evolution. Institute of Science and Technology Austria.
[Published Version] View | Files available | DOI
 
2020 | Research Data | IST-REx-ID: 7383 | OA
Grah R. 2020. Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation, Institute of Science and Technology Austria, 10.15479/AT:ISTA:7383.
[Published Version] View | Files available | DOI
 
2020 | Published | Journal Article | IST-REx-ID: 7569 | OA
Grah R, Friedlander T. 2020. The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. 16(2), e1007642.
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2020 | Research Data Reference | IST-REx-ID: 9777 | OA
Grah R, Friedlander T. 2020. Maximizing crosstalk, Public Library of Science, 10.1371/journal.pcbi.1007642.s002.
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2020 | Research Data Reference | IST-REx-ID: 9779
Grah R, Friedlander T. 2020. Distribution of crosstalk values, Public Library of Science, 10.1371/journal.pcbi.1007642.s003.
[Published Version] View | Files available | DOI
 
2020 | Research Data Reference | IST-REx-ID: 9776
Grah R, Friedlander T. 2020. Supporting information, Public Library of Science, 10.1371/journal.pcbi.1007642.s001.
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2020 | Published | Journal Article | IST-REx-ID: 8105 | OA
Lombardi F, Wang JWJL, Zhang X, Ivanov PC. 2020. Power-law correlations and coupling of active and quiet states underlie a class of complex systems with self-organization at criticality. EPJ Web of Conferences. 230, 00005.
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2020 | Published | Thesis | IST-REx-ID: 8657 | OA
Kavcic B. 2020. Perturbations of protein synthesis: from antibiotics to genetics and physiology. Institute of Science and Technology Austria.
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2020 | Published | Journal Article | IST-REx-ID: 8250 | OA
Kavcic B, Tkačik G, Bollenbach MT. 2020. Mechanisms of drug interactions between translation-inhibiting antibiotics. Nature Communications. 11, 4013.
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2020 | Published | Preprint | IST-REx-ID: 7673 | OA
Kavcic B, Tkačik G, Bollenbach MT. 2020. A minimal biophysical model of combined antibiotic action. bioRxiv, 10.1101/2020.04.18.047886.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
2020 | Published | Journal Article | IST-REx-ID: 7652 | OA
Tomanek I, Grah R, Lagator M, Andersson AMC, Bollback JP, Tkačik G, Guet CC. 2020. Gene amplification as a form of population-level gene expression regulation. Nature Ecology & Evolution. 4(4), 612–625.
[Submitted Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2019 | Published | Journal Article | IST-REx-ID: 5817 | OA
Kavcic B, Sakashita A, Noguchi H, Ziherl P. 2019. Limiting shapes of confined lipid vesicles. Soft Matter. 15(4), 602–614.
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2019 | Published | Journal Article | IST-REx-ID: 6090 | OA
Carballo-Pacheco M, Desponds J, Gavrilchenko T, Mayer A, Prizak R, Reddy G, Nemenman I, Mora T. 2019. Receptor crosstalk improves concentration sensing of multiple ligands. Physical Review E. 99(2), 022423.
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 

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