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4964 Publications

2022 | Journal Article | IST-REx-ID: 12108 |

Meadowcroft, B., Palaia, I., Pfitzner, A. K., Roux, A., Baum, B., & Šarić, A. (2022). Mechanochemical rules for shape-shifting filaments that remodel membranes. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.129.268101

2022 | Journal Article | IST-REx-ID: 12332 |

Mlynarski, W. F., & Tkačik, G. (2022). Efficient coding theory of dynamic attentional modulation. PLoS Biology. Public Library of Science. https://doi.org/10.1371/journal.pbio.3001889

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2022 | Journal Article | IST-REx-ID: 12333 |

Tomanek, I., & Guet, C. C. (2022). Adaptation dynamics between copynumber and point mutations. ELife. eLife Sciences Publications. https://doi.org/10.7554/ELIFE.82240

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2022 | Research Data Reference | IST-REx-ID: 12339 |

Tomanek, I., & Guet, C. C. (2022). Flow cytometry YFP and CFP data and deep sequencing data of populations evolving in galactose. Dryad. https://doi.org/10.5061/dryad.rfj6q57ds

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2022 | Journal Article | IST-REx-ID: 12129 |

Wagner, U., & Welzl, E. (2022). Connectivity of triangulation flip graphs in the plane. Discrete & Computational Geometry. Springer Nature. https://doi.org/10.1007/s00454-022-00436-2

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2022 | Journal Article | IST-REx-ID: 12131 |

Byazrova, M. G., Astakhova, E. A., Minnegalieva, A., Sukhova, M. M., Mikhailov, A. A., Prilipov, A. G., … Filatov, A. V. (2022). Anti-Ad26 humoral immunity does not compromise SARS-COV-2 neutralizing antibody responses following Gam-COVID-Vac booster vaccination. Npj Vaccines. Springer Nature. https://doi.org/10.1038/s41541-022-00566-x

2022 | Journal Article | IST-REx-ID: 12130 |

Huang, J., Zhao, L., Malik, S., Gentile, B. R., Xiong, V., Arazi, T., … Zhao, D. (2022). Specification of female germline by microRNA orchestrated auxin signaling in Arabidopsis. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-022-34723-6

2022 | Journal Article | IST-REx-ID: 12128 |

Poelking, C., Faber, F. A., & Cheng, B. (2022). BenchML: An extensible pipelining framework for benchmarking representations of materials and molecules at scale. Machine Learning: Science and Technology. IOP Publishing. https://doi.org/10.1088/2632-2153/ac4d11

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2022 | Journal Article | IST-REx-ID: 12133

Cremer, S., & Sixt, M. K. (2022). Principles of disease defence in organisms, superorganisms and societies. Nature Reviews Immunology. Springer Nature. https://doi.org/10.1038/s41577-022-00797-y

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2022 | Journal Article | IST-REx-ID: 12143 |

Zapletal D, Taborska E, Pasulka J, Malik R, Kubicek K, Zanova M, Much C, Sebesta M, Buccheri V, Horvat F, Jenickova I, Prochazkova M, Prochazka J, Pinkas M, Novacek J, Joseph DF, Sedlacek R, Bernecky C, O’Carroll D, Stefl R, Svoboda P. 2022. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. 82(21), 4064–4079.e13.

2022 | Journal Article | IST-REx-ID: 12142 |

Ojavee, S. E., Kutalik, Z., & Robinson, M. R. (2022). Liability-scale heritability estimation for biobank studies of low-prevalence disease. The American Journal of Human Genetics. Elsevier. https://doi.org/10.1016/j.ajhg.2022.09.011

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2022 | Journal Article | IST-REx-ID: 12140 |

Basilico, B., Ferrucci, L., Khan, A., Di Angelantonio, S., Ragozzino, D., & Reverte, I. (2022). What microglia depletion approaches tell us about the role of microglia on synaptic function and behavior. Frontiers in Cellular Neuroscience. Frontiers Media. https://doi.org/10.3389/fncel.2022.1022431

2022 | Journal Article | IST-REx-ID: 12137 |

Wang, B., Ayats López, R., Deguchi, K., Mellibovsky, F., & Meseguer, A. (2022). Self-sustainment of coherent structures in counter-rotating Taylor–Couette flow. Journal of Fluid Mechanics. Cambridge University Press. https://doi.org/10.1017/jfm.2022.828

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2022 | Journal Article | IST-REx-ID: 12145 |

Koudjinan, E., & Kaloshin, V. (2022). On some invariants of Birkhoff billiards under conjugacy. Regular and Chaotic Dynamics. Springer Nature. https://doi.org/10.1134/S1560354722050021

2022 | Journal Article | IST-REx-ID: 12139 |

Ghazaryan, A., Kirmani, A., Fernandes, R. M., & Ghaemi, P. (2022). Anomalous Shiba states in topological iron-based superconductors. Physical Review B. American Physical Society. https://doi.org/10.1103/physrevb.106.l201107

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2022 | Journal Article | IST-REx-ID: 12147 |

Hasani, R., Lechner, M., Amini, A., Liebenwein, L., Ray, A., Tschaikowski, M., … Rus, D. (2022). Closed-form continuous-time neural networks. Nature Machine Intelligence. Springer Nature. https://doi.org/10.1038/s42256-022-00556-7

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2022 | Journal Article | IST-REx-ID: 12152 |

Jiang, X., Harker-Kirschneck, L., Vanhille-Campos, C. E., Pfitzner, A.-K., Lominadze, E., Roux, A., … Šarić, A. (2022). Modelling membrane reshaping by staged polymerization of ESCRT-III filaments. PLOS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1010586

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2022 | Journal Article | IST-REx-ID: 12148 |

Cipolloni, G., Erdös, L., & Schröder, D. J. (2022). Rank-uniform local law for Wigner matrices. Forum of Mathematics, Sigma. Cambridge University Press. https://doi.org/10.1017/fms.2022.86

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2022 | Journal Article | IST-REx-ID: 12149 |

Gambino, G., Bhik-Ghanie, R., Giglia, G., Puig, M. V., Ramirez Villegas, J. F., & Zaldivar, D. (2022). Editorial: Neuromodulatory ascending systems: Their influence at the microscopic and macroscopic levels. Frontiers in Neural Circuits. Frontiers Media. https://doi.org/10.3389/fncir.2022.1028154

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2022 | Journal Article | IST-REx-ID: 12150 |

Rzadkowski, W., Lemeshko, M., & Mentink, J. H. (2022). Artificial neural network states for nonadditive systems. Physical Review B. American Physical Society. https://doi.org/10.1103/physrevb.106.155127

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2022 | Journal Article | IST-REx-ID: 12151 |

Cooley, O., Kang, M., & Pikhurko, O. (2022). On a question of Vera T. Sós about size forcing of graphons. Acta Mathematica Hungarica. Springer Nature. https://doi.org/10.1007/s10474-022-01265-8

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2022 | Journal Article | IST-REx-ID: 12174 |

Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA, Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB, Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis. Brain. 145(8), 2687–2703.

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2022 | Journal Article | IST-REx-ID: 12173 |

Baumgartner, M., Zirnbauer, R., Schlager, S., Mertens, D., Gasche, N., Sladek, B., … Gasche, C. (2022). Atypical enteropathogenic E. coli are associated with disease activity in ulcerative colitis. Gut Microbes. Taylor & Francis. https://doi.org/10.1080/19490976.2022.2143218

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2022 | Journal Article | IST-REx-ID: 12157 |

Hayward, L., & Sella, G. (2022). Polygenic adaptation after a sudden change in environment. ELife. eLife Sciences Publications. https://doi.org/10.7554/elife.66697

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2022 | Conference Paper | IST-REx-ID: 12161 |

Tomaszewska, P., & Lampert, C. (2022). Lightweight conditional model extrapolation for streaming data under class-prior shift. In 26th International Conference on Pattern Recognition (Vol. 2022, pp. 2128–2134). Montreal, Canada: Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/icpr56361.2022.9956195

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2022 | Conference Paper | IST-REx-ID: 12160

De la Rocha, A., Kokoris Kogias, E., Soares, J. M., & Vukolic, M. (2022). Hierarchical consensus: A horizontal scaling framework for blockchains. In 42nd International Conference on Distributed Computing Systems Workshops (Vol. 2022, pp. 45–52). Bologna, Italy: Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/icdcsw56584.2022.00018

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2022 | Journal Article | IST-REx-ID: 12209 |

Nunes Pinheiro, D. C., Kardos, R., Hannezo, E. B., & Heisenberg, C.-P. J. (2022). Morphogen gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven unjamming. Nature Physics. Springer Nature. https://doi.org/10.1038/s41567-022-01787-6

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2022 | Journal Article | IST-REx-ID: 12212 |

Martín-Belmonte, A., Aguado, C., Alfaro-Ruiz, R., Moreno-Martínez, A. E., de la Ossa, L., Aso, E., … Luján, R. (2022). Nanoscale alterations in GABAB receptors and GIRK channel organization on the hippocampus of APP/PS1 mice. Alzheimer’s Research & Therapy. Springer Nature. https://doi.org/10.1186/s13195-022-01078-5

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2022 | Journal Article | IST-REx-ID: 12208 |

Prehal, C., von Mentlen, J.-M., Drvarič Talian, S., Vizintin, A., Dominko, R., Amenitsch, H., … Wood, V. (2022). On the nanoscale structural evolution of solid discharge products in lithium-sulfur batteries using operando scattering. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-022-33931-4

2022 | Journal Article | IST-REx-ID: 12213 |

Paerschke, E., Chen, W.-C., Ray, R., & Chen, C.-C. (2022). Evolution of electronic and magnetic properties of Sr₂IrO₄ under strain. Npj Quantum Materials. Springer Nature. https://doi.org/10.1038/s41535-022-00496-w

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2022 | Journal Article | IST-REx-ID: 12184 |

Henheik, S. J., & Wessel, T. (2022). On adiabatic theory for extended fermionic lattice systems. Journal of Mathematical Physics. AIP Publishing. https://doi.org/10.1063/5.0123441

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2022 | Journal Article | IST-REx-ID: 12210 |

Akylzhanov, R., Kuznetsova, Y., Ruzhansky, M., & Zhang, H. (2022). Norms of certain functions of a distinguished Laplacian on the ax + b groups. Mathematische Zeitschrift. Springer Nature. https://doi.org/10.1007/s00209-022-03143-z

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2022 | Journal Article | IST-REx-ID: 12214 |

Gehér, G. P., Titkos, T., & Virosztek, D. (2022). The isometry group of Wasserstein spaces: The Hilbertian case. Journal of the London Mathematical Society. Wiley. https://doi.org/10.1112/jlms.12676

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2022 | Journal Article | IST-REx-ID: 12227 |

Kovačič, S., Schafzahl, B., Matsko, N. B., Gruber, K., Schmuck, M., Koller, S., … Slugovc, C. (2022). Carbon foams via ring-opening metathesis polymerization of emulsion templates: A facile method to make carbon current collectors for battery applications. ACS Applied Energy Materials. American Chemical Society. https://doi.org/10.1021/acsaem.2c02787

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2022 | Journal Article | IST-REx-ID: 12217 |

Randriamanantsoa, S., Papargyriou, A., Maurer, H. C., Peschke, K., Schuster, M., Zecchin, G., … Bausch, A. R. (2022). Spatiotemporal dynamics of self-organized branching in pancreas-derived organoids. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-022-32806-y

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2022 | Journal Article | IST-REx-ID: 12231 |

Kogure, Y. S., Muraoka, H., Koizumi, W. C., Gelin-alessi, R., Godard, B. G., Oka, K., … Hotta, K. (2022). Admp regulates tail bending by controlling ventral epidermal cell polarity via phosphorylated myosin localization in Ciona. Development. The Company of Biologists. https://doi.org/10.1242/dev.200215

2022 | Journal Article | IST-REx-ID: 12226 |

Pokusaeva, V., Diez, A. R., Espinar, L., Pérez, A. T., & Filion, G. J. (2022). Strand asymmetry influences mismatch resolution during single-strand annealing. Genome Biology. Springer Nature. https://doi.org/10.1186/s13059-022-02665-3

2022 | Journal Article | IST-REx-ID: 12225 |

Currin, C., Vera, S. V., & Khaledi-Nasab, A. (2022). Depolarization of echo chambers by random dynamical nudge. Scientific Reports. Springer Nature. https://doi.org/10.1038/s41598-022-12494-w

2022 | Journal Article | IST-REx-ID: 12216 |

Carlen, E. A., & Zhang, H. (2022). Monotonicity versions of Epstein’s concavity theorem and related inequalities. Linear Algebra and Its Applications. Elsevier. https://doi.org/10.1016/j.laa.2022.09.001

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2022 | Journal Article | IST-REx-ID: 12235 |

Patxot, M., Stojanov, M., Ojavee, S. E., Gobert, R. P., Kutalik, Z., Gavillet, M., … Robinson, M. R. (2022). Haematological changes from conception to childbirth: An indicator of major pregnancy complications. European Journal of Haematology. Wiley. https://doi.org/10.1111/ejh.13844

2022 | Journal Article | IST-REx-ID: 12431 |

Ishida, S., Wojtan, C., & Chern, A. (2022). Hidden degrees of freedom in implicit vortex filaments. ACM Transactions on Graphics. Association for Computing Machinery. https://doi.org/10.1145/3550454.3555459

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2022 | Journal Article | IST-REx-ID: 12232 |

Cipolloni, G., Erdös, L., & Schröder, D. J. (2022). Density of small singular values of the shifted real Ginibre ensemble. Annales Henri Poincaré. Springer Nature. https://doi.org/10.1007/s00023-022-01188-8

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2022 | Journal Article | IST-REx-ID: 12234 |

Stankowski, S. (2022). Digest: On the origin of a possible hybrid species. Evolution. Wiley. https://doi.org/10.1111/evo.14632

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2022 | Journal Article | IST-REx-ID: 12233 |

Doan, N., Hashemi, S. A., Mondelli, M., & Gross, W. J. (2022). Decoding Reed-Muller codes with successive codeword permutations. IEEE Transactions on Communications. Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/tcomm.2022.3211101

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2022 | Conference Paper | IST-REx-ID: 12432

Anastos, M. (2022). Solving the Hamilton cycle problem fast on average. In 63rd Annual IEEE Symposium on Foundations of Computer Science (Vol. 2022–October, pp. 919–930). Denver, CO, United States: Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/FOCS54457.2022.00091

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2022 | Journal Article | IST-REx-ID: 12239 |

Johnson, A. J., Kaufmann, W., Sommer, C. M., Costanzo, T., Dahhan, D. A., Bednarek, S. Y., & Friml, J. (2022). Three-dimensional visualization of planta clathrin-coated vesicles at ultrastructural resolution. Molecular Plant. Elsevier. https://doi.org/10.1016/j.molp.2022.09.003

2022 | Journal Article | IST-REx-ID: 12247 |

Koch, E. L., Ravinet, M., Westram, A. M., Johannesson, K., & Butlin, R. K. (2022). Genetic architecture of repeated phenotypic divergence in Littorina saxatilis evolution. Evolution. Wiley. https://doi.org/10.1111/evo.14602

2022 | Journal Article | IST-REx-ID: 12243 |

Cipolloni, G., Erdös, L., Schröder, D. J., & Xu, Y. (2022). Directional extremal statistics for Ginibre eigenvalues. Journal of Mathematical Physics. AIP Publishing. https://doi.org/10.1063/5.0104290

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2022 | Journal Article | IST-REx-ID: 12245 |

Soto, X., Burton, J., Manning, C. S., Minchington, T., Lea, R., Lee, J., … Papalopulu, N. (2022). Sequential and additive expression of miR-9 precursors control timing of neurogenesis. Development. The Company of Biologists. https://doi.org/10.1242/dev.200474

2022 | Journal Article | IST-REx-ID: 12238

Hino, N., Matsuda, K., Jikko, Y., Maryu, G., Sakai, K., Imamura, R., … Matsuda, M. (2022). A feedback loop between lamellipodial extension and HGF-ERK signaling specifies leader cells during collective cell migration. Developmental Cell. Elsevier. https://doi.org/10.1016/j.devcel.2022.09.003

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