ISTA Research Explorer

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5735 Publications

2020 | Published | Journal Article | IST-REx-ID: 8707 |

Galan S, Machnik NN, Kruse K, Díaz N, Marti-Renom MA, Vaquerizas JM. CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction. Nature Genetics. 2020;52:1247-1255. doi:10.1038/s41588-020-00712-y

2020 | Published | Thesis | IST-REx-ID: 7525 |

Bhandari P. Localization and functional role of Cav2.3 in the medial habenula to interpeduncular nucleus pathway. 2020. doi:10.15479/AT:ISTA:7525

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 7427 |

Tan S, Abas MF, Verstraeten I, et al. Salicylic acid targets protein phosphatase 2A to attenuate growth in plants. Current Biology. 2020;30(3):381-395.e8. doi:10.1016/j.cub.2019.11.058

2020 | Published | Journal Article | IST-REx-ID: 7500 |

Mazur E, Kulik I, Hajny J, Friml J. Auxin canalization and vascular tissue formation by TIR1/AFB-mediated auxin signaling in arabidopsis. New Phytologist. 2020;226(5):1375-1383. doi:10.1111/nph.16446

2020 | Published | Thesis | IST-REx-ID: 8822 |

Hajny J. Identification and characterization of the molecular machinery of auxin-dependent canalization during vasculature formation and regeneration. 2020. doi:10.15479/AT:ISTA:8822

[Published Version] View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 8190 |

Sixt MK, Huttenlocher A. Zena Werb (1945-2020): Cell biology in context. The Journal of Cell Biology. 2020;219(8). doi:10.1083/jcb.202007029

2020 | Published | Journal Article | IST-REx-ID: 8986 |

Zhang Y, Rodriguez Solovey L, Li L, Zhang X, Friml J. Functional innovations of PIN auxin transporters mark crucial evolutionary transitions during rise of flowering plants. Science Advances. 2020;6(50). doi:10.1126/sciadv.abc8895

2020 | Published | Journal Article | IST-REx-ID: 8283 |

Chen, Huihuang, AcoMYB4, an Ananas comosus L. MYB transcription factor, functions in osmotic stress through negative regulation of ABA signaling. International Journal of Molecular Sciences 21 (16). 2020

2020 | Published | Journal Article | IST-REx-ID: 8532 |

Kleindienst, David, Deep learning-assisted high-throughput analysis of freeze-fracture replica images applied to glutamate receptors and calcium channels at hippocampal synapses. International Journal of Molecular Sciences 21 (18). 2020

[Published Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 7161 |

Shehu Y, Gibali A, Sagratella S. Inertial projection-type methods for solving quasi-variational inequalities in real Hilbert spaces. Journal of Optimization Theory and Applications. 2020;184:877–894. doi:10.1007/s10957-019-01616-6

[Submitted Version] View | Files available | DOI | WoS

2020 | Published | Journal Article | IST-REx-ID: 8002 |

Hörmayer L, Montesinos López JC, Marhavá P, Benková E, Yoshida S, Friml J. Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots. Proceedings of the National Academy of Sciences of the United States of America. 2020;117(26). doi:10.1073/pnas.2003346117

2020 | Published | Journal Article | IST-REx-ID: 8139 |

Johnson AJ, Gnyliukh N, Kaufmann W, et al. Experimental toolbox for quantitative evaluation of clathrin-mediated endocytosis in the plant model Arabidopsis. Journal of Cell Science. 2020;133(15). doi:10.1242/jcs.248062

2020 | Published | Journal Article | IST-REx-ID: 6918 |

Goharshady AK, Mohammadi F. An efficient algorithm for computing network reliability in small treewidth. Reliability Engineering and System Safety. 2020;193. doi:10.1016/j.ress.2019.106665

2020 | Published | Conference Paper | IST-REx-ID: 7810 |

Chatterjee K, Goharshady AK, Ibsen-Jensen R, Pavlogiannis A. Optimal and perfectly parallel algorithms for on-demand data-flow analysis. In: European Symposium on Programming. Vol 12075. Springer Nature; 2020:112-140. doi:10.1007/978-3-030-44914-8_5

[Published Version] View | Files available | DOI | WoS

2020 | Published | Conference Paper | IST-REx-ID: 8728 |

Asadi A, Chatterjee K, Goharshady AK, Mohammadi K, Pavlogiannis A. Faster algorithms for quantitative analysis of MCs and MDPs with small treewidth. In: Automated Technology for Verification and Analysis. Vol 12302. Springer Nature; 2020:253-270. doi:10.1007/978-3-030-59152-6_14

[Submitted Version] View | Files available | DOI | WoS

2020 | Published | Conference Paper | IST-REx-ID: 8089 |

Chatterjee K, Fu H, Goharshady AK, Goharshady EK. Polynomial invariant generation for non-deterministic recursive programs. In: Proceedings of the 41st ACM SIGPLAN Conference on Programming Language Design and Implementation. Association for Computing Machinery; 2020:672-687. doi:10.1145/3385412.3385969

2020 | Published | Journal Article | IST-REx-ID: 7387 |

Baranova NS, Radler P, Hernández-Rocamora VM, et al. Diffusion and capture permits dynamic coupling between treadmilling FtsZ filaments and cell division proteins. Nature Microbiology. 2020;5:407-417. doi:10.1038/s41564-019-0657-5

2020 | Published | Preprint | IST-REx-ID: 9750 |

Slovakova J, Sikora MK, Caballero Mancebo S, et al. Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion. bioRxiv. 2020. doi:10.1101/2020.11.20.391284

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2020 | Published | Conference Paper | IST-REx-ID: 9198 |

Shevchenko A, Mondelli M. Landscape connectivity and dropout stability of SGD solutions for over-parameterized neural networks. In: Proceedings of the 37th International Conference on Machine Learning. Vol 119. ML Research Press; 2020:8773-8784.

[Published Version] View | Files available | arXiv

2020 | Published | Journal Article | IST-REx-ID: 7426 |

Garcia Soto M, Prabhakar P. Abstraction based verification of stability of polyhedral switched systems. Nonlinear Analysis: Hybrid Systems. 2020;36(5). doi:10.1016/j.nahs.2020.100856

[Submitted Version] View | Files available | DOI | WoS

2020 | Published | Thesis | IST-REx-ID: 8340 |

Kampjut D. Molecular mechanisms of mitochondrial redox-coupled proton pumping enzymes. 2020. doi:10.15479/AT:ISTA:8340

View | Files available | DOI

2020 | Published | Thesis | IST-REx-ID: 8350 |

Shamipour S. Bulk actin dynamics drive phase segregation in zebrafish oocytes . 2020. doi:10.15479/AT:ISTA:8350

View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 8434 |

Dimchev GA, Amiri B, Humphries AC, et al. Lamellipodin tunes cell migration by stabilizing protrusions and promoting adhesion formation. Journal of Cell Science. 2020;133(7). doi:10.1242/jcs.239020

2020 | Published | Journal Article | IST-REx-ID: 8569 |

Hansen AH, Hippenmeyer S. Non-cell-autonomous mechanisms in radial projection neuron migration in the developing cerebral cortex. Frontiers in Cell and Developmental Biology. 2020;8(9). doi:10.3389/fcell.2020.574382

2020 | Published | Thesis | IST-REx-ID: 7258 |

Scarselli D. New approaches to reduce friction in turbulent pipe flow. 2020. doi:10.15479/AT:ISTA:7258

View | Files available | DOI

2020 | Published | Journal Article | IST-REx-ID: 7885 |

Reversat A, Gärtner FR, Merrin J, et al. Cellular locomotion using environmental topography. Nature. 2020;582:582–585. doi:10.1038/s41586-020-2283-z

2019 | Published | Conference Paper | IST-REx-ID: 14184 |

Locatello F, Tschannen M, Bauer S, Rätsch G, Schölkopf B, Bachem O. Disentangling factors of variation using few labels. In: 8th International Conference on Learning Representations. ; 2019.

[Preprint] View | Download Preprint (ext.) | arXiv

2019 | Published | Conference Paper | IST-REx-ID: 14189 |

Gresele L, Rubenstein PK, Mehrjou A, Locatello F, Schölkopf B. The incomplete Rosetta Stone problem: Identifiability results for multi-view nonlinear ICA. In: Proceedings of the 35th Conference on Uncertainty in Artificial Intelligence. Vol 115. ML Research Press; 2019:217-227.

[Preprint] View | Download Preprint (ext.) | arXiv

2019 | Published | Conference Paper | IST-REx-ID: 14190 |

Gondal MW, Wüthrich M, Miladinović Đ, et al. On the transfer of inductive bias from simulation to the real world: a new disentanglement dataset. In: Advances in Neural Information Processing Systems. Vol 32. ; 2019.

[Preprint] View | Download Preprint (ext.) | arXiv

2019 | Published | Conference Paper | IST-REx-ID: 14191 |

Locatello F, Yurtsever A, Fercoq O, Cevher V. Stochastic Frank-Wolfe for composite convex minimization. In: Advances in Neural Information Processing Systems. Vol 32. ; 2019:14291–14301.

[Preprint] View | Download Preprint (ext.) | arXiv

2019 | Published | Conference Paper | IST-REx-ID: 14193 |

Steenkiste S van, Locatello F, Schmidhuber J, Bachem O. Are disentangled representations helpful for abstract visual reasoning? In: Advances in Neural Information Processing Systems. Vol 32. ; 2019.

[Preprint] View | Download Preprint (ext.) | arXiv

2019 | Published | Conference Paper | IST-REx-ID: 14197 |

Locatello F, Abbati G, Rainforth T, Bauer S, Schölkopf B, Bachem O. On the fairness of disentangled representations. In: Advances in Neural Information Processing Systems. Vol 32. ; 2019:14611–14624.

[Preprint] View | Download Preprint (ext.) | arXiv

2019 | Published | Conference Paper | IST-REx-ID: 14200 |

Locatello F, Bauer S, Lucic M, et al. Challenging common assumptions in the unsupervised learning of disentangled representations. In: Proceedings of the 36th International Conference on Machine Learning. Vol 97. ML Research Press; 2019:4114-4124.

[Preprint] View | Download Preprint (ext.) | arXiv

2019 | Published | Journal Article | IST-REx-ID: 10874 |

Ionica S, Kılıçer P, Lauter K, et al. Modular invariants for genus 3 hyperelliptic curves. Research in Number Theory. 2019;5. doi:10.1007/s40993-018-0146-6

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

2019 | Published | Conference Paper | IST-REx-ID: 10877 |

Frehse G, Abate A, Adzkiya D, et al. ARCH-COMP19 Category Report: Hybrid systems with piecewise constant dynamics. In: Frehse G, Althoff M, eds. ARCH19. 6th International Workshop on Applied Verification of Continuous and Hybrid Systems. Vol 61. EasyChair; 2019:1-13. doi:10.29007/rjwn

[Published Version] View | Files available | DOI

2019 | Published | Journal Article | IST-REx-ID: 301 |

Gerencser M, Gyöngy I. A Feynman–Kac formula for stochastic Dirichlet problems. Stochastic Processes and their Applications. 2019;129(3):995-1012. doi:10.1016/j.spa.2018.04.003

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2019 | Published | Journal Article | IST-REx-ID: 5 |

Ganev IV. The wonderful compactification for quantum groups. Journal of the London Mathematical Society. 2019;99(3):778-806. doi:10.1112/jlms.12193

[Published Version] View | Files available | DOI | WoS

2019 | Published | Book Chapter | IST-REx-ID: 5793

Asaoka Y, Morita H, Furumoto H, Heisenberg C-PJ, Furutani-Seiki M. Studying YAP-mediated 3D morphogenesis using fish embryos and human spheroids. In: Hergovich A, ed. The Hippo Pathway. Vol 1893. Methods in Molecular Biology. Springer; 2019:167-181. doi:10.1007/978-1-4939-8910-2_14

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2019 | Published | Journal Article | IST-REx-ID: 5817 |

Kavcic B, Sakashita A, Noguchi H, Ziherl P. Limiting shapes of confined lipid vesicles. Soft Matter. 2019;15(4):602-614. doi:10.1039/c8sm01956h

2019 | Published | Journal Article | IST-REx-ID: 5878 |

Budanur NB, Fleury M. State space geometry of the chaotic pilot-wave hydrodynamics. Chaos: An Interdisciplinary Journal of Nonlinear Science. 2019;29(1). doi:10.1063/1.5058279

2019 | Published | Journal Article | IST-REx-ID: 5906 |

Goremykina A, Vasseur R, Serbyn M. Analytically solvable renormalization group for the many-body localization transition. Physical Review Letters. 2019;122(4). doi:10.1103/physrevlett.122.040601

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2019 | Published | Journal Article | IST-REx-ID: 5907 |

Mócsai R, Figl R, Troschl C, et al. N-glycans of the microalga Chlorella vulgaris are of the oligomannosidic type but highly methylated. Scientific Reports. 2019;9(1). doi:10.1038/s41598-018-36884-1

[Published Version] View | Files available | DOI | WoS

2019 | Published | Journal Article | IST-REx-ID: 5908 |

Lee E, Vanneste S, Pérez-Sancho J, et al. Ionic stress enhances ER–PM connectivity via phosphoinositide-associated SYT1 contact site expansion in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 2019;116(4):1420-1429. doi:10.1073/pnas.1818099116

2019 | Published | Journal Article | IST-REx-ID: 5944 |

Corominas-Murtra B. Thermodynamics of duplication thresholds in synthetic protocell systems. Life. 2019;9(1). doi:10.3390/life9010009

[Published Version] View | Files available | DOI | WoS

2019 | Published | Conference Paper | IST-REx-ID: 5947 |

Chatterjee B, Peri S, Sa M, Singhal N. A simple and practical concurrent non-blocking unbounded graph with linearizable reachability queries. In: ACM International Conference Proceeding Series. ACM; 2019:168-177. doi:10.1145/3288599.3288617

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2019 | Published | Journal Article | IST-REx-ID: 6022 |

Merrill RM, Rastas P, Martin SH, et al. Genetic dissection of assortative mating behavior. PLoS Biology. 2019;17(2). doi:10.1371/journal.pbio.2005902

[Published Version] View | Files available | DOI | WoS

2019 | Published | Journal Article | IST-REx-ID: 6028 |

Gerencser M, Hairer M. A solution theory for quasilinear singular SPDEs. Communications on Pure and Applied Mathematics. 2019;72(9):1983-2005. doi:10.1002/cpa.21816

[Published Version] View | Files available | DOI | WoS

2019 | Published | Journal Article | IST-REx-ID: 6029 |

Lindner M, Tresztenyak A, Fülöp G, et al. A fast and simple contact printing approach to generate 2D protein nanopatterns. Frontiers in Chemistry. 2019;6. doi:10.3389/fchem.2018.00655

[Published Version] View | Files available | DOI | WoS

2019 | Published | Journal Article | IST-REx-ID: 6050 |

Akopyan A, Fedorov R. Two circles and only a straightedge. Proceedings of the American Mathematical Society. 2019;147:91-102. doi:10.1090/proc/14240

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

2019 | Published | Journal Article | IST-REx-ID: 6053 |

Kalaee M, Mirhosseini M, Dieterle PB, Peruzzo M, Fink JM, Painter O. Quantum electromechanics of a hypersonic crystal. Nature Nanotechnology. 2019;14(4):334–339. doi:10.1038/s41565-019-0377-2

[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS

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