Anne Kupczok
Bollback Group
10 Publications
2014 | Journal Article | IST-REx-ID: 2042 | 
Kupczok, Anne, and Jonathan P Bollback. “Motif Depletion in Bacteriophages Infecting Hosts with CRISPR Systems.” BMC Genomics. BioMed Central, 2014. https://doi.org/10.1186/1471-2164-15-663.
[Published Version]
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| DOI
2013 | Journal Article | IST-REx-ID: 2412 |
Kupczok, Anne, and Jonathan P Bollback. “Probabilistic Models for CRISPR Spacer Content Evolution .” BMC Evolutionary Biology. BioMed Central, 2013. https://doi.org/10.1186/1471-2148-13-54.
[Published Version]
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| DOI
2013 | Journal Article | IST-REx-ID: 2410 |
Fernandes Redondo, Rodrigo A, Anne Kupczok, Gertraud Stift, and Jonathan P Bollback. “Complete Genome Sequence of the Novel Phage MG-B1 Infecting Bacillus Weihenstephanensis.” Genome Announcements. American Society for Microbiology, 2013. https://doi.org/10.1128/genomeA.00216-13.
[Published Version]
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| DOI
2012 | Journal Article | IST-REx-ID: 2411 |
Ebersberger, Ingo, Ricardo De Matos Simoes, Anne Kupczok, Matthias Gube, Erika Kothe, Kerstin Voigt, and Arndt Von Haeseler. “A Consistent Phylogenetic Backbone for the Fungi.” Molecular Biology and Evolution. Oxford University Press, 2012. https://doi.org/10.1093/molbev/msr285.
[Published Version]
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| Files available
| DOI
2011 | Journal Article | IST-REx-ID: 3370 |
Kupczok, Anne. “Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods.” Systematic Biology. Oxford University Press, 2011. https://doi.org/10.1093/sysbio/syq086.
[Submitted Version]
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| DOI
| Download Submitted Version (ext.)
2011 | Journal Article | IST-REx-ID: 3387 |
Kupczok, Anne. “Split Based Computation of Majority Rule Supertrees.” BMC Evolutionary Biology. BioMed Central, 2011. https://doi.org/10.1186/1471-2148-11-205.
[Published Version]
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| Files available
| DOI
2010 | Journal Article | IST-REx-ID: 2409 |
Kupczok, Anne, Heiko Schmidt, and Arndt Von Haeseler. “Accuracy of Phylogeny Reconstruction Methods Combining Overlapping Gene Data Sets .” Algorithms for Molecular Biology. BioMed Central, 2010. https://doi.org/10.1186/1748-7188-5-37.
[Published Version]
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| Files available
| DOI
2009 | Journal Article | IST-REx-ID: 3768
Kupczok, Anne, and Arndt Von Haeseler. “Comment on ‘{A} Congruence Index for Testing Topological Similarity between Trees’.” Bioinformatics. Oxford University Press, 2009. https://doi.org/4199.
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| DOI
2008 | Journal Article | IST-REx-ID: 3769
Kupczok, Anne, Arndt Von Haeseler, and Steffen Klaere. “An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees.” Journal of Computational Biology. Mary Ann Liebert, 2008. https://doi.org/4200.
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| DOI
2006 | Journal Article | IST-REx-ID: 3767
Kupczok, Anne, and Peter Dittrich. “Determinants of Simulated RNA Evolution.” Journal of Theoretical Biology. Elsevier, 2006. https://doi.org/10.1016/j.jtbi.2005.06.019.
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| DOI
10 Publications
2014 | Journal Article | IST-REx-ID: 2042 |
Kupczok, Anne, and Jonathan P Bollback. “Motif Depletion in Bacteriophages Infecting Hosts with CRISPR Systems.” BMC Genomics. BioMed Central, 2014. https://doi.org/10.1186/1471-2164-15-663.
[Published Version]
View
| Files available
| DOI
2013 | Journal Article | IST-REx-ID: 2412 |
Kupczok, Anne, and Jonathan P Bollback. “Probabilistic Models for CRISPR Spacer Content Evolution .” BMC Evolutionary Biology. BioMed Central, 2013. https://doi.org/10.1186/1471-2148-13-54.
[Published Version]
View
| Files available
| DOI
2013 | Journal Article | IST-REx-ID: 2410 |
Fernandes Redondo, Rodrigo A, Anne Kupczok, Gertraud Stift, and Jonathan P Bollback. “Complete Genome Sequence of the Novel Phage MG-B1 Infecting Bacillus Weihenstephanensis.” Genome Announcements. American Society for Microbiology, 2013. https://doi.org/10.1128/genomeA.00216-13.
[Published Version]
View
| Files available
| DOI
2012 | Journal Article | IST-REx-ID: 2411 |
Ebersberger, Ingo, Ricardo De Matos Simoes, Anne Kupczok, Matthias Gube, Erika Kothe, Kerstin Voigt, and Arndt Von Haeseler. “A Consistent Phylogenetic Backbone for the Fungi.” Molecular Biology and Evolution. Oxford University Press, 2012. https://doi.org/10.1093/molbev/msr285.
[Published Version]
View
| Files available
| DOI
2011 | Journal Article | IST-REx-ID: 3370 |
Kupczok, Anne. “Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods.” Systematic Biology. Oxford University Press, 2011. https://doi.org/10.1093/sysbio/syq086.
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
2011 | Journal Article | IST-REx-ID: 3387 |
Kupczok, Anne. “Split Based Computation of Majority Rule Supertrees.” BMC Evolutionary Biology. BioMed Central, 2011. https://doi.org/10.1186/1471-2148-11-205.
[Published Version]
View
| Files available
| DOI
2010 | Journal Article | IST-REx-ID: 2409 |
Kupczok, Anne, Heiko Schmidt, and Arndt Von Haeseler. “Accuracy of Phylogeny Reconstruction Methods Combining Overlapping Gene Data Sets .” Algorithms for Molecular Biology. BioMed Central, 2010. https://doi.org/10.1186/1748-7188-5-37.
[Published Version]
View
| Files available
| DOI
2009 | Journal Article | IST-REx-ID: 3768
Kupczok, Anne, and Arndt Von Haeseler. “Comment on ‘{A} Congruence Index for Testing Topological Similarity between Trees’.” Bioinformatics. Oxford University Press, 2009. https://doi.org/4199.
View
| DOI
2008 | Journal Article | IST-REx-ID: 3769
Kupczok, Anne, Arndt Von Haeseler, and Steffen Klaere. “An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees.” Journal of Computational Biology. Mary Ann Liebert, 2008. https://doi.org/4200.
View
| DOI
2006 | Journal Article | IST-REx-ID: 3767
Kupczok, Anne, and Peter Dittrich. “Determinants of Simulated RNA Evolution.” Journal of Theoretical Biology. Elsevier, 2006. https://doi.org/10.1016/j.jtbi.2005.06.019.
View
| DOI