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Gasper Tkacik

Sofia Backlund

Alexis Benichou

Céline Camila Coraly Bräutigam

Pietro Chiarantoni

Athina Diakogianni

Krishnan Iyer

Reka Borbely

Björn Kscheschinski

Teemu Kuosmanen

Gabor Lengyel

Ekaterina Maksimova

Elia Mascolo

Pablo Mateu Hoyos

Anuj Patel

Tetiana Rabiichuk

Simon Rella

Julian Renaud

Puzhen Xia

Bahti Zakirov

Alex Chen Yi Zhang

Tereza Zuskinova

Gabriel Mitchell

Anna Andersson

Katarina Bodova

Vicent Botella Soler

David Brückner

Sarah Cepeda Humerez

Remy Chait

Matthew Chalk

Heloisa Chiossi

Daniele De Martino

Tamar Friedlander

Mantas Gabrielaitis

Aditya Gilra

Rok Grah

Michal Hledik

Jan Humplik

Bor Kavcic

Moritz Lang

Anna Levina (Martius)

Fabrizio Lombardi

Georg Martius

Roshan Prizak

Georg Rieckh

Jakob Ruess

Natalia Ruzickova

Cristina Savin

Sreyam Sengupta

Thomas Sokolowski



207 Publications

2017 | Published | Journal Article | IST-REx-ID: 666 | OA
Noisy response to antibiotic stress predicts subsequent single cell survival in an acidic environment
K. Mitosch, G. Rieckh, M.T. Bollenbach, Cell Systems 4 (2017) 393–403.
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 680 | OA
Sensory noise predicts divisive reshaping of receptive fields
M.J. Chalk, P. Masset, B. Gutkin, S. Denève, PLoS Computational Biology 13 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 720 | OA
Probabilistic models for neural populations that naturally capture global coupling and criticality
J. Humplik, G. Tkačik, PLoS Computational Biology 13 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 725 | OA
Discrete modes of social information processing predict individual behavior of fish in a group
R. Harpaz, G. Tkačik, E. Schneidman, PNAS 114 (2017) 10149–10154.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2017 | Published | Journal Article | IST-REx-ID: 730
Maximum entropy models as a tool for building precise neural controls
C. Savin, G. Tkačik, Current Opinion in Neurobiology 46 (2017) 120–126.
View | DOI | WoS
 
2017 | Research Data Reference | IST-REx-ID: 9855
Supplementary appendix
M.J. Chalk, P. Masset, B. Gutkin, S. Denève, (2017).
[Published Version] View | Files available | DOI
 
2017 | Published | Journal Article | IST-REx-ID: 993 | OA
Subsampling scaling
A. Levina (Martius), V. Priesemann, Nature Communications 8 (2017).
[Published Version] View | Files available | DOI | WoS
 
2017 | Published | Journal Article | IST-REx-ID: 823 | OA
Phase transitions in integer linear problems
S. Colabrese, D. De Martino, L. Leuzzi, E. Marinari, Journal of Statistical Mechanics: Theory and Experiment 2017 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | arXiv
 
2017 | Published | Journal Article | IST-REx-ID: 947 | OA
Quantifying the entropic cost of cellular growth control
D. De Martino, F. Capuani, A. De Martino, Physical Review E 96 (2017).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | arXiv
 
2017 | Published | Journal Article | IST-REx-ID: 959 | OA
Scales and multimodal flux distributions in stationary metabolic network models via thermodynamics
D. De Martino, Physical Review E 95 (2017) 062419.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | arXiv
 
2017 | Published | Journal Article | IST-REx-ID: 735
An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate
V. Barone, M. Lang, G. Krens, S. Pradhan, S. Shamipour, K. Sako, M.K. Sikora, C.C. Guet, C.-P.J. Heisenberg, Developmental Cell 43 (2017) 198–211.
View | Files available | DOI | WoS
 
2016 | Published | Conference Paper | IST-REx-ID: 1082 | OA
Relevant sparse codes with variational information bottleneck
M.J. Chalk, O. Marre, G. Tkačik, in:, Neural Information Processing Systems Foundation, 2016, pp. 1965–1973.
[Preprint] View | Files available | Download Preprint (ext.) | arXiv
 
2016 | Published | Conference Paper | IST-REx-ID: 1105 | OA
Estimating nonlinear neural response functions using GP priors and Kronecker methods
C. Savin, G. Tkačik, in:, Neural Information Processing Systems Foundation, 2016, pp. 3610–3618.
View | Download None (ext.)
 
2016 | Published | Journal Article | IST-REx-ID: 1148
Adaptive moment closure for parameter inference of biochemical reaction networks
C. Schilling, S. Bogomolov, T.A. Henzinger, A. Podelski, J. Ruess, Biosystems 149 (2016) 15–25.
View | Files available | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1171
Understanding regulatory networks requires more than computing a multitude of graph statistics: Comment on "Drivers of structural features in gene regulatory networks: From biophysical constraints to biological function" by O. C. Martin et al.
G. Tkačik, Physics of Life Reviews 17 (2016) 166–167.
View | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1197 | OA
Error-robust modes of the retinal population code
J. Prentice, O. Marre, M. Ioffe, A. Loback, G. Tkačik, M. Berry, PLoS Computational Biology 12 (2016).
[Published Version] View | Files available | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1203 | OA
Comparative genomic analysis of Haemophilus haemolyticus and nontypeable Haemophilus influenzae and a new testing scheme for their discrimination
F. Hu, L. Rishishwar, A. Sivadas, G. Mitchell, J. King, T. Murphy, J. Gilsdorf, L. Mayer, X. Wang, Journal of Clinical Microbiology 54 (2016) 3010–3017.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS
 
2016 | Published | Conference Paper | IST-REx-ID: 1214
Compliant control for soft robots: Emergent behavior of a tendon driven anthropomorphic arm
G.S. Martius, R. Hostettler, A. Knoll, R. Der, in:, IEEE, 2016.
View | DOI
 
2016 | Published | Conference Paper | IST-REx-ID: 1220 | OA
Fuselage boundary layer ingestion propulsion applied to a thin haul commuter aircraft for optimal efficiency
G. Mikić, A. Stoll, J. Bevirt, R. Grah, M. Moore, in:, AIAA, 2016, pp. 1–19.
[Preprint] View | DOI | Download Preprint (ext.)
 
2016 | Published | Journal Article | IST-REx-ID: 1242 | OA
Extending the dynamic range of transcription factor action by translational regulation
T.R. Sokolowski, A. Walczak, W. Bialek, G. Tkačik, Physical Review E Statistical Nonlinear and Soft Matter Physics 93 (2016).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

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