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Teemu Kuosmanen

Gabor Lengyel

Céline Camila Coraly Bräutigam

Tetiana Rabiichuk

Krishnan Iyer

Julian Renaud

Alexis Benichou

Bahti Zakirov

Reka Borbely

Ekaterina Maksimova

Alex Chen Yi Zhang

Sofia Backlund

Pablo Mateu Hoyos

Gasper Tkacik

Athina Diakogianni

Bjoern Kscheschinski

Elia Mascolo

Natalia Ruzickova

Anuj Patel

Puzhen Xia

Tereza Zuskinova

Gabriel Mitchell

David Brückner

Sarah Cepeda Humerez

Georg Rieckh

Anna Andersson

Thomas Sokolowski

Michal Hledik

Bor Kavcic

Moritz Lang

Vicent Botella Soler

Remy Chait

Jan Humplik

Katarina Bodova

Aditya Gilra

Anna Levina (Martius)

Rok Grah

Georg Martius

Heloisa Chiossi

Simon Rella

Tamar Friedlander

Mantas Gabrielaitis

Sreyam Sengupta

Roshan Prizak

Matthew Chalk

Daniele De Martino

Fabrizio Lombardi

Jakob Ruess

Cristina Savin



202 Publications

2016 | Published | Journal Article | IST-REx-ID: 1248 | OA
Information processing in living systems
G. Tkačik, W. Bialek, Annual Review of Condensed Matter Physics 7 (2016) 89–117.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Journal Article | IST-REx-ID: 1260 | OA
The dual of the space of interactions in neural network models
D. De Martino, International Journal of Modern Physics C 27 (2016).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Journal Article | IST-REx-ID: 1266 | OA
Neural oscillations as a signature of efficient coding in the presence of synaptic delays
M.J. Chalk, B. Gutkin, S. Denève, ELife 5 (2016).
[Published Version] View | Files available | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1270 | OA
Beyond the French flag model: Exploiting spatial and gene regulatory interactions for positional information
P. Hillenbrand, U. Gerland, G. Tkačik, PLoS One 11 (2016).
[Published Version] View | Files available | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1290 | OA
Compounds that select against the tetracycline-resistance efflux pump
L. Stone, M. Baym, T. Lieberman, R.P. Chait, J. Clardy, R. Kishony, Nature Chemical Biology 12 (2016) 902–904.
[Preprint] View | DOI | Download Preprint (ext.) | WoS
 
2016 | Published | Conference Paper | IST-REx-ID: 1320 | OA
Scale-invariant systems realize nonlinear differential operators
M. Lang, E. Sontag, in:, IEEE, 2016.
[Submitted Version] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1332 | OA
Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments
R.P. Chait, A. Palmer, I. Yelin, R. Kishony, Nature Communications 7 (2016).
[Published Version] View | Files available | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1485 | OA
Genome-scale estimate of the metabolic turnover of E. Coli from the energy balance analysis
D. De Martino, Physical Biology 13 (2016).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Conference Paper | IST-REx-ID: 1082 | OA
Relevant sparse codes with variational information bottleneck
M.J. Chalk, O. Marre, G. Tkačik, in:, Neural Information Processing Systems Foundation, 2016, pp. 1965–1973.
[Preprint] View | Files available | Download Preprint (ext.) | arXiv
 
2016 | Published | Conference Paper | IST-REx-ID: 1105 | OA
Estimating nonlinear neural response functions using GP priors and Kronecker methods
C. Savin, G. Tkačik, in:, Neural Information Processing Systems Foundation, 2016, pp. 3610–3618.
View | Download None (ext.)
 
2016 | Published | Thesis | PhD | IST-REx-ID: 1128 | OA
Studying the complexities of transcriptional regulation
G. Rieckh, Studying the Complexities of Transcriptional Regulation, Institute of Science and Technology Austria, 2016.
[Published Version] View | Files available
 
2016 | Published | Conference Paper | IST-REx-ID: 8094 | OA
Self-organized control of an tendon driven arm by differential extrinsic plasticity
G.S. Martius, R. Hostettler, A. Knoll, R. Der, in:, 15th International Conference on the Synthesis and Simulation of Living Systems, MIT Press, 2016, pp. 142–143.
[Published Version] View | Files available | DOI
 
2016 | Published | Conference Paper | IST-REx-ID: 948 | OA
Neurons equipped with intrinsic plasticity learn stimulus intensity statistics
T. Monk, C. Savin, J. Lücke, in:, Neural Information Processing Systems Foundation, 2016, pp. 4285–4293.
View | Download None (ext.)
 
2016 | Research Data Reference | IST-REx-ID: 9869
Error bound on an estimator of position
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version] View | Files available | DOI
 
2016 | Research Data Reference | IST-REx-ID: 9870
Computation of positional information in an Ising model
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version] View | Files available | DOI
 
2016 | Research Data Reference | IST-REx-ID: 9871
Computation of positional information in a discrete morphogen field
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version] View | Files available | DOI
 
2015 | Published | Journal Article | IST-REx-ID: 1827 | OA
Evolution of bow-tie architectures in biology
T. Friedlander, A. Mayo, T. Tlusty, U. Alon, PLoS Computational Biology 11 (2015).
[Published Version] View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1861
Moment-based methods for parameter inference and experiment design for stochastic biochemical reaction networks
J. Ruess, J. Lygeros, ACM Transactions on Modeling and Computer Simulation 25 (2015).
View | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1885 | OA
Positional information, positional error, and readout precision in morphogenesis: A mathematical framework
G. Tkačik, J. Dubuis, M. Petkova, T. Gregor, Genetics 199 (2015) 39–59.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2015 | Published | Journal Article | IST-REx-ID: 1940 | OA
Optimizing information flow in small genetic networks. IV. Spatial coupling
T.R. Sokolowski, G. Tkačik, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

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