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200 Publications
2025 | Published | Journal Article | IST-REx-ID: 19701 | 
Tkačik G, Wolde PRT. Information processing in biochemical networks. Annual review of biophysics. 2025;54:249-274. doi:10.1146/annurev-biophys-060524-102720
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2025 | Published | Journal Article | IST-REx-ID: 19785 |
Kavcic B, Tkačik G. Token-driven totally asymmetric simple exclusion processes. Physical Review E. 2025;111(5). doi:10.1103/physreve.111.054122
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2025 | Research Data | IST-REx-ID: 19658 |
Tkačik G. Token-driven totally asymmetric simple exclusion processes. 2025. doi:10.15479/AT:ISTA:19658
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2025 | Published | Journal Article | IST-REx-ID: 19626 |
Jain K, Hauschild R, Bochkareva O, Römhild R, Tkačik G, Guet CC. Pulsatile basal gene expression as a fitness determinant in bacteria. Proceedings of the National Academy of Sciences. 2025;122(15). doi:10.1073/pnas.2413709122
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2025 | Research Data | IST-REx-ID: 19294 |
Jain K, Hauschild R, Bochkareva O, Römhild R, Tkačik G, Guet CC. Data for “Pulsatile basal gene expression as a fitness determinant in bacteria.” 2025. doi:10.15479/AT:ISTA:19294
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2025 | Published | Journal Article | IST-REx-ID: 20664 |
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Kapoor L, Ruzickova N, Zivadinovic P, et al. Quantifying the carbon footprint of conference travel: The case of NMR meetings. Magnetic Resonance. 2025;6(2):243-256. doi:10.5194/mr-6-243-2025
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2025 | Published | Thesis | IST-REx-ID: 20357
Ruzickova N. Effect propagation in biological networks. 2025. doi:10.15479/AT-ISTA-20357
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2025 | Published | Thesis | IST-REx-ID: 20811 |
Rella S. Adaptive processes in biology and culture : Models of evolving vaccine resistance and the record statistics of innovation. 2025. doi:10.15479/AT-ISTA-20811
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2024 | Published | Journal Article | IST-REx-ID: 14901 |
Nomura K, Rella S, Merritt H, et al. Tipping points of space debris in low earth orbit. International Journal of the Commons. 2024;18(1). doi:10.5334/ijc.1275
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2024 | Published | Thesis | IST-REx-ID: 15020 |
Hledik M. Genetic information and biological optimization. 2024. doi:10.15479/at:ista:15020
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2024 | Published | Journal Article | IST-REx-ID: 17123 |
Brückner D, Tkačik G. Information content and optimization of self-organized developmental systems. Proceedings of the National Academy of Sciences of the United States of America. 2024;121(23). doi:10.1073/pnas.2322326121
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2024 | Published | Journal Article | IST-REx-ID: 18525 |
Ruzickova N, Hledik M, Tkačik G. Quantitative omnigenic model discovers interpretable genome-wide associations. Proceedings of the National Academy of Sciences of the United States of America. 2024;121(44). doi:10.1073/pnas.2402340121
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2024 | Published | Journal Article | IST-REx-ID: 18902 |
Zagorski M, Brandenberg N, Lutolf M, et al. Assessing the precision of morphogen gradients in neural tube development. Nature Communications. 2024;15. doi:10.1038/s41467-024-45148-8
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2024 | Published | Journal Article | IST-REx-ID: 18307 |
Rella S, Kulikova YA, Minnegalieva A, Kondrashov F. Complex vaccination strategies prevent the emergence of vaccine resistance. Evolution: International journal of organic evolution. 2024;78(10):1722-1738. doi:10.1093/evolut/qpae106
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2023 | Published | Journal Article | IST-REx-ID: 13127 |
Casillas Perez BE, Bodova K, Grasse AV, Tkačik G, Cremer S. Dynamic pathogen detection and social feedback shape collective hygiene in ants. Nature Communications. 2023;14. doi:10.1038/s41467-023-38947-y
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2023 | Published | Journal Article | IST-REx-ID: 12487 |
Scarpetta S, Morrisi N, Mutti C, et al. Criticality of neuronal avalanches in human sleep and their relationship with sleep macro- and micro-architecture. iScience. 2023;26(10):107840. doi:10.1016/j.isci.2023.107840
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2023 | Published | Journal Article | IST-REx-ID: 14402 |
Lombardi F, Herrmann HJ, Parrino L, et al. Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state. Cell Reports. 2023;42(10). doi:10.1016/j.celrep.2023.113162
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2023 | Published | Conference Abstract | IST-REx-ID: 14862 |
Rella S, Kulikova Y, Minnegalieva A, Kondrashov F. Complex vaccination strategies prevent the emergence of vaccine resistance. In: European Journal of Public Health. Vol 33. Oxford University Press; 2023. doi:10.1093/eurpub/ckad160.597
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2023 | Published | Journal Article | IST-REx-ID: 12762 |
Lombardi F, Pepic S, Shriki O, Tkačik G, De Martino D. Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain. Nature Computational Science. 2023;3:254-263. doi:10.1038/s43588-023-00410-9
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| arXiv
2023 | Published | Journal Article | IST-REx-ID: 14515 |
Reinhardt M, Tkačik G, Ten Wolde PR. Path weight sampling: Exact Monte Carlo computation of the mutual information between stochastic trajectories. Physical Review X. 2023;13(4). doi:10.1103/PhysRevX.13.041017
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