ISTA Research Explorer

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Bahti Zakirov

Natalia Ruzickova

Alexis Benichou

Bjoern Kscheschinski

Anuj Patel

Gabor Lengyel

Tereza Zuskinova

Sofia Backlund

Elia Mascolo

Puzhen Xia

Reka Borbely

Julian Renaud

Alex Chen Yi Zhang

Gasper Tkacik

Céline Camila Coraly Bräutigam

Teemu Kuosmanen

Pablo Mateu Hoyos

Athina Diakogianni

Ekaterina Maksimova

Krishnan Iyer

Tetiana Rabiichuk

Georg Martius

Roshan Prizak

Daniele De Martino

Bor Kavcic

Fabrizio Lombardi

Aditya Gilra

Simon Rella

Gabriel Mitchell

Georg Rieckh

Sarah Cepeda Humerez

Vicent Botella Soler

David Brückner

Matthew Chalk

Cristina Savin

Jakob Ruess

Remy Chait

Moritz Lang

Michal Hledik

Heloisa Chiossi

Mantas Gabrielaitis

Anna Andersson

Rok Grah

Thomas Sokolowski

Jan Humplik

Sreyam Sengupta

Tamar Friedlander

Katarina Bodova

Anna Levina (Martius)

202 Publications

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2025 | Published | Journal Article | IST-REx-ID: 18849 |

Deriving a genetic regulatory network from an optimization principle
T.R. Sokolowski, T. Gregor, W. Bialek, G. Tkačik, Proceedings of the National Academy of Sciences 122 (2025).

2025 | Published | Journal Article | IST-REx-ID: 18850 |

Chromatin enables precise and scalable gene regulation with factors of limited specificity
M.L. Perkins, J. Crocker, G. Tkačik, Proceedings of the National Academy of Sciences 122 (2025).

2025 | Published | Journal Article | IST-REx-ID: 18936 |

Linking molecular mechanisms to their evolutionary consequences: a primer
R. Grah, C.C. Guet, G. Tkačik, M. Lagator, Genetics 229 (2025).

2025 | Research Data | IST-REx-ID: 18991 |

Research data for the publication "Learning reshapes the hippocampal representation hierarchy"
H.S.C. Chiossi, (2025).

[Published Version] View | Files available | DOI

2025 | Research Data | IST-REx-ID: 19294 |

Data for "Pulsatile basal gene expression as a fitness determinant in bacteria"
K. Jain, R. Hauschild, O. Bochkareva, R. Römhild, G. Tkačik, C.C. Guet, (2025).

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 19453 |

Learning reshapes the hippocampal representation hierarchy
H.S.C. Chiossi, M. Nardin, G. Tkačik, J.L. Csicsvari, Proceedings of the National Academy of Sciences 122 (2025).

2025 | Published | Journal Article | IST-REx-ID: 19626 |

Pulsatile basal gene expression as a fitness determinant in bacteria
K. Jain, R. Hauschild, O. Bochkareva, R. Römhild, G. Tkačik, C.C. Guet, Proceedings of the National Academy of Sciences 122 (2025).

2025 | Research Data | IST-REx-ID: 19658 |

Token-driven totally asymmetric simple exclusion processes
G. Tkačik, (2025).

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 19701 |

Information processing in biochemical networks
G. Tkačik, P.R.T. Wolde, Annual Review of Biophysics 54 (2025) 249–274.

bioSBM: A random graph model to integrate epigenomic data in chromatin structure prediction
C.Y. Zhang, A. Rosa, G. Sanguinetti, PRX Life 3 (2025).

[Published Version] View | Files available | DOI | arXiv

2024 | Published | Journal Article | IST-REx-ID: 18307 |

Complex vaccination strategies prevent the emergence of vaccine resistance
S. Rella, Y.A. Kulikova, A. Minnegalieva, F. Kondrashov, Evolution: International Journal of Organic Evolution 78 (2024) 1722–1738.

2024 | Published | Journal Article | IST-REx-ID: 18525 |

Quantitative omnigenic model discovers interpretable genome-wide associations
N. Ruzickova, M. Hledik, G. Tkačik, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).

2024 | Published | Journal Article | IST-REx-ID: 18902 |

Assessing the precision of morphogen gradients in neural tube development
M. Zagorski, N. Brandenberg, M. Lutolf, G. Tkačik, M.T. Bollenbach, J. Briscoe, A. Kicheva, Nature Communications 15 (2024).

2024 | Published | Journal Article | IST-REx-ID: 14901 |

Tipping points of space debris in low earth orbit
K. Nomura, S. Rella, H. Merritt, M. Baltussen, D. Bird, A. Tjuka, D. Falk, International Journal of the Commons 18 (2024).

[Published Version] View | Files available | DOI

2024 | Published | Thesis | PhD | IST-REx-ID: 15020 |

Genetic information and biological optimization
M. Hledik, Genetic Information and Biological Optimization, Institute of Science and Technology Austria, 2024.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 17123 |

Information content and optimization of self-organized developmental systems
D. Brückner, G. Tkačik, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).

2023 | Published | Journal Article | IST-REx-ID: 14402 |

Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state
F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. De Arcangelis, O. Shriki, Cell Reports 42 (2023).

2023 | Published | Journal Article | IST-REx-ID: 14515 |

Path weight sampling: Exact Monte Carlo computation of the mutual information between stochastic trajectories
M. Reinhardt, G. Tkačik, P.R. Ten Wolde, Physical Review X 13 (2023).

[Published Version] View | Files available | DOI | WoS | arXiv

2023 | Published | Journal Article | IST-REx-ID: 12487 |

Criticality of neuronal avalanches in human sleep and their relationship with sleep macro- and micro-architecture
S. Scarpetta, N. Morrisi, C. Mutti, N. Azzi, I. Trippi, R. Ciliento, I. Apicella, G. Messuti, M. Angiolelli, F. Lombardi, L. Parrino, A.E. Vaudano, IScience 26 (2023) 107840.

2023 | Published | Journal Article | IST-REx-ID: 12762 |

Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain
F. Lombardi, S. Pepic, O. Shriki, G. Tkačik, D. De Martino, Nature Computational Science 3 (2023) 254–263.

Tkacik Group

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202 Publications

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Tkacik Group

Please note that LibreCat no longer supports Internet Explorer versions 8 or 9 (or earlier).

Alumni

202 Publications

Search

Filter Publications

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