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4947 Publications
2023 | Thesis | IST-REx-ID: 14323
Regulation of neural progenitor survival by Shh and BMP in the developing spinal cord
K. Kuzmicz-Kowalska, Regulation of Neural Progenitor Survival by Shh and BMP in the Developing Spinal Cord, Institute of Science and Technology Austria, 2023.
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K. Kuzmicz-Kowalska, Regulation of Neural Progenitor Survival by Shh and BMP in the Developing Spinal Cord, Institute of Science and Technology Austria, 2023.
2023 | Conference Paper | IST-REx-ID: 14974 | 
Causality in the time of LLMs: Round table discussion results of CLeaR 2023
C. Zhang, D. Janzing, M. van der Schaar, F. Locatello, P. Spirtes, K. Zhang, B. Schölkopf, C. Uhler, in:, 2nd Conference on Causal Learning and Reasoning, 2023.
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C. Zhang, D. Janzing, M. van der Schaar, F. Locatello, P. Spirtes, K. Zhang, B. Schölkopf, C. Uhler, in:, 2nd Conference on Causal Learning and Reasoning, 2023.
2023 | Research Data | IST-REx-ID: 13173 |
Transition from tonic to phasic neurotransmitter release by presynaptic GABAB receptor activation in medial habenula terminals
R. Shigemoto, (2023).
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R. Shigemoto, (2023).
2023 | Conference Paper | IST-REx-ID: 13236 |
Multiplicative auction algorithm for approximate maximum weight bipartite matching
D.W. Zheng, M.H. Henzinger, in:, International Conference on Integer Programming and Combinatorial Optimization, Springer Nature, 2023, pp. 453–465.
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D.W. Zheng, M.H. Henzinger, in:, International Conference on Integer Programming and Combinatorial Optimization, Springer Nature, 2023, pp. 453–465.
2023 | Journal Article | IST-REx-ID: 13182 |
Geometric characterization of the persistence of 1D maps
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Journal of Applied and Computational Topology (2023).
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R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Journal of Applied and Computational Topology (2023).
2023 | Journal Article | IST-REx-ID: 13044 |
Singlet oxygen in non-aqueous oxygen redox: Direct spectroscopic evidence for formation pathways and reliability of chemical probes
S. Mondal, R.B. Jethwa, B. Pant, R. Hauschild, S.A. Freunberger, Faraday Discussions (2023).
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S. Mondal, R.B. Jethwa, B. Pant, R. Hauschild, S.A. Freunberger, Faraday Discussions (2023).
2023 | Thesis | IST-REx-ID: 14587 |
Weak-strong stability and phase-field approximation of interface evolution problems in fluid mechanics and in material sciences
A. Marveggio, Weak-Strong Stability and Phase-Field Approximation of Interface Evolution Problems in Fluid Mechanics and in Material Sciences, Institute of Science and Technology Austria, 2023.
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A. Marveggio, Weak-Strong Stability and Phase-Field Approximation of Interface Evolution Problems in Fluid Mechanics and in Material Sciences, Institute of Science and Technology Austria, 2023.
2023 | Conference Paper | IST-REx-ID: 14922 |
Concentration without independence via information measures
A.R. Esposito, M. Mondelli, in:, Proceedings of 2023 IEEE International Symposium on Information Theory, IEEE, 2023, pp. 400–405.
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A.R. Esposito, M. Mondelli, in:, Proceedings of 2023 IEEE International Symposium on Information Theory, IEEE, 2023, pp. 400–405.
2023 | Journal Article | IST-REx-ID: 15173 |
Enumerating matroids and linear spaces
M.A. Kwan, A. Sah, M. Sawhney, Comptes Rendus Mathematique 361 (2023) 565–575.
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M.A. Kwan, A. Sah, M. Sawhney, Comptes Rendus Mathematique 361 (2023) 565–575.
2023 | Journal Article | IST-REx-ID: 14772 |
Maximal Lp-regularity and H∞-calculus for block operator matrices and applications
A. Agresti, A. Hussein, Journal of Functional Analysis 285 (2023).
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A. Agresti, A. Hussein, Journal of Functional Analysis 285 (2023).
2023 | Preprint | IST-REx-ID: 15128 |
Mesoscopic eigenvalue statistics for Wigner-type matrices
V. Riabov, ArXiv (n.d.).
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V. Riabov, ArXiv (n.d.).
2023 | Preprint | IST-REx-ID: 14732 |
Genetic load, eco-evolutionary feedback and extinction in a metapopulation
O.O. Olusanya, K. Khudiakova, H. Sachdeva, BioRxiv (n.d.).
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O.O. Olusanya, K. Khudiakova, H. Sachdeva, BioRxiv (n.d.).
2023 | Conference Paper | IST-REx-ID: 13262 |
Provably-efficient and internally-deterministic parallel Union-Find
A. Fedorov, D. Hashemi, G. Nadiradze, D.-A. Alistarh, in:, Proceedings of the 35th ACM Symposium on Parallelism in Algorithms and Architectures, Association for Computing Machinery, 2023, pp. 261–271.
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A. Fedorov, D. Hashemi, G. Nadiradze, D.-A. Alistarh, in:, Proceedings of the 35th ACM Symposium on Parallelism in Algorithms and Architectures, Association for Computing Machinery, 2023, pp. 261–271.
2023 | Conference Paper | IST-REx-ID: 12979 |
Gloss-aware color correction for 3D printing
J. Condor, M. Piovarci, B. Bickel, P. Didyk, in:, SIGGRAPH ’23 Conference Proceedings, Association for Computing Machinery, 2023.
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J. Condor, M. Piovarci, B. Bickel, P. Didyk, in:, SIGGRAPH ’23 Conference Proceedings, Association for Computing Machinery, 2023.
2023 | Conference Paper | IST-REx-ID: 13228 |
Runtime monitoring of dynamic fairness properties
T.A. Henzinger, M. Karimi, K. Kueffner, K. Mallik, in:, FAccT ’23: Proceedings of the 2023 ACM Conference on Fairness, Accountability, and Transparency, Association for Computing Machinery, 2023, pp. 604–614.
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T.A. Henzinger, M. Karimi, K. Kueffner, K. Mallik, in:, FAccT ’23: Proceedings of the 2023 ACM Conference on Fairness, Accountability, and Transparency, Association for Computing Machinery, 2023, pp. 604–614.
2023 | Journal Article | IST-REx-ID: 12984 |
Skin-Screen: A computational fabrication framework for color tattoos
M. Piovarci, A. Chapiro, B. Bickel, Transactions on Graphics 42 (2023).
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M. Piovarci, A. Chapiro, B. Bickel, Transactions on Graphics 42 (2023).
2023 | Journal Article | IST-REx-ID: 14833 |
Whole-genome phylogeography of the intertidal snail Littorina saxatilis
S. Stankowski, Z.B. Zagrodzka, J. Galindo, M. Montaño-Rendón, R. Faria, N. Mikhailova, A.M.H. Blakeslee, E. Arnason, T. Broquet, H.E. Morales, J.W. Grahame, A.M. Westram, K. Johannesson, R.K. Butlin, Evolutionary Journal of the Linnean Society 2 (2023).
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S. Stankowski, Z.B. Zagrodzka, J. Galindo, M. Montaño-Rendón, R. Faria, N. Mikhailova, A.M.H. Blakeslee, E. Arnason, T. Broquet, H.E. Morales, J.W. Grahame, A.M. Westram, K. Johannesson, R.K. Butlin, Evolutionary Journal of the Linnean Society 2 (2023).
2023 | Journal Article | IST-REx-ID: 14613 |
The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome
C. Lasne, M.N. Elkrewi, M.A. Toups, L.A. Layana Franco, A. Macon, B. Vicoso, Molecular Biology and Evolution 40 (2023).
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C. Lasne, M.N. Elkrewi, M.A. Toups, L.A. Layana Franco, A. Macon, B. Vicoso, Molecular Biology and Evolution 40 (2023).
2023 | Research Data | IST-REx-ID: 14614 |
The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome
C. Lasne, M.N. Elkrewi, (2023).
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C. Lasne, M.N. Elkrewi, (2023).
2023 | Thesis | IST-REx-ID: 14641
Adaptive mutation in E. coli modulated by luxS
M. Hennessey-Wesen, Adaptive Mutation in E. Coli Modulated by LuxS, Institute of Science and Technology Austria, 2023.
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M. Hennessey-Wesen, Adaptive Mutation in E. Coli Modulated by LuxS, Institute of Science and Technology Austria, 2023.
2023 | Preprint | IST-REx-ID: 14591 |
Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in plants
N. Gnyliukh, A.J. Johnson, M.-K. Nagel, A. Monzer, A. Hlavata, E. Isono, M. Loose, J. Friml, BioRxiv (n.d.).
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N. Gnyliukh, A.J. Johnson, M.-K. Nagel, A. Monzer, A. Hlavata, E. Isono, M. Loose, J. Friml, BioRxiv (n.d.).
2023 | Thesis | IST-REx-ID: 12491 |
Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography
B. Zens, Ultrastructural Characterization of Natively Preserved Extracellular Matrix by Cryo-Electron Tomography, Institute of Science and Technology Austria, 2023.
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B. Zens, Ultrastructural Characterization of Natively Preserved Extracellular Matrix by Cryo-Electron Tomography, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12781 |
Structural and mechanistic study of bacterial complex I and its cyanobacterial ortholog
V. Kravchuk, Structural and Mechanistic Study of Bacterial Complex I and Its Cyanobacterial Ortholog, Institute of Science and Technology Austria, 2023.
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V. Kravchuk, Structural and Mechanistic Study of Bacterial Complex I and Its Cyanobacterial Ortholog, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12809 |
Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning
C. Alcarva, Plasticity in the Cerebellum: What Molecular Mechanisms Are behind Physiological Learning, Institute of Science and Technology Austria, 2023.
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C. Alcarva, Plasticity in the Cerebellum: What Molecular Mechanisms Are behind Physiological Learning, Institute of Science and Technology Austria, 2023.
2023 | Journal Article | IST-REx-ID: 13201 |
The nitrate transporter NRT2.1 directly antagonizes PIN7-mediated auxin transport for root growth adaptation
Y. Wang, Z. Yuan, J. Wang, H. Xiao, L. Wan, L. Li, Y. Guo, Z. Gong, J. Friml, J. Zhang, Proceedings of the National Academy of Sciences of the United States of America 120 (2023).
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Y. Wang, Z. Yuan, J. Wang, H. Xiao, L. Wan, L. Li, Y. Guo, Z. Gong, J. Friml, J. Zhang, Proceedings of the National Academy of Sciences of the United States of America 120 (2023).
2023 | Thesis | IST-REx-ID: 14226 |
Generalizing medial axes with homology switches
E.R. Stephenson, Generalizing Medial Axes with Homology Switches, Institute of Science and Technology Austria, 2023.
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E.R. Stephenson, Generalizing Medial Axes with Homology Switches, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12531 |
Panoramic functional gradients across the mouse retina
K. Kirillova, Panoramic Functional Gradients across the Mouse Retina, Institute of Science and Technology Austria, 2023.
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K. Kirillova, Panoramic Functional Gradients across the Mouse Retina, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12800 |
The effect of local population structure on genetic variation at selected loci in the A. majus hybrid zone
M. Julseth, The Effect of Local Population Structure on Genetic Variation at Selected Loci in the A. Majus Hybrid Zone, Institute of Science and Technology Austria, 2023.
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M. Julseth, The Effect of Local Population Structure on Genetic Variation at Selected Loci in the A. Majus Hybrid Zone, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 14510
Mechanism of clathrin-coated vesicle formation during endocytosis in plants
N. Gnyliukh, Mechanism of Clathrin-Coated Vesicle Formation during Endocytosis in Plants, Institute of Science and Technology Austria, 2023.
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N. Gnyliukh, Mechanism of Clathrin-Coated Vesicle Formation during Endocytosis in Plants, Institute of Science and Technology Austria, 2023.
2023 | Thesis | IST-REx-ID: 12897 |
Inverse shape design with parametric representations: Kirchhoff Rods and parametric surface models
C. Hafner, Inverse Shape Design with Parametric Representations: Kirchhoff Rods and Parametric Surface Models, Institute of Science and Technology Austria, 2023.
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C. Hafner, Inverse Shape Design with Parametric Representations: Kirchhoff Rods and Parametric Surface Models, Institute of Science and Technology Austria, 2023.
2023 | Journal Article | IST-REx-ID: 13188 |
The design space of Kirchhoff rods
C. Hafner, B. Bickel, ACM Transactions on Graphics 42 (2023).
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C. Hafner, B. Bickel, ACM Transactions on Graphics 42 (2023).
2023 | Thesis | IST-REx-ID: 12470 |
A versatile toolbox for the comprehensive analysis of nervous tissue organization with light microscopy
J.M. Michalska, A Versatile Toolbox for the Comprehensive Analysis of Nervous Tissue Organization with Light Microscopy, Institute of Science and Technology Austria, 2023.
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J.M. Michalska, A Versatile Toolbox for the Comprehensive Analysis of Nervous Tissue Organization with Light Microscopy, Institute of Science and Technology Austria, 2023.
2022 | Journal Article | IST-REx-ID: 10652 |
Constraints on probing quantum coherence to infer gravitational entanglement
O. Hosten, Physical Review Research 4 (2022).
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O. Hosten, Physical Review Research 4 (2022).
2022 | Conference Paper | IST-REx-ID: 10774 |
Flavors of sequential information flow
E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Springer Nature, 2022, pp. 1–19.
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E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Springer Nature, 2022, pp. 1–19.
2022 | Journal Article | IST-REx-ID: 10769 |
Non relativistic quantum field theory: Dynamics and irreversibility
L. Daguerre, G. Torroba, R.A. Medina Ramos, M. Solís, Anales de la Asociacion Fisica Argentina 32 (2022) 93–98.
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L. Daguerre, G. Torroba, R.A. Medina Ramos, M. Solís, Anales de la Asociacion Fisica Argentina 32 (2022) 93–98.
2022 | Preprint | IST-REx-ID: 10821 |
Alpha rhythm induces attenuation-amplification dynamics in neural activity cascades
F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
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F. Lombardi, H.J. Herrmann, L. Parrino, D. Plenz, S. Scarpetta, A.E. Vaudano, L. de Arcangelis, O. Shriki, BioRxiv (2022).
2022 | Journal Article | IST-REx-ID: 10845 |
Impurity with a resonance in the vicinity of the Fermi energy
M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
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M. Maslov, M. Lemeshko, A. Volosniev, Physical Review Research 4 (2022).
2022 | Journal Article | IST-REx-ID: 10939 |
Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
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A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
2022 | Conference Paper | IST-REx-ID: 11184 |
Fast graphical population protocols
D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Conference Paper | IST-REx-ID: 11183 |
Beyond distributed subgraph detection: Induced subgraphs, multicolored problems and graph parameters
A. Nikabadi, J. Korhonen, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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A. Nikabadi, J. Korhonen, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Conference Paper | IST-REx-ID: 11428 |
A cautionary tale: Burning the medial axis is unstable
E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
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E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
2022 | Journal Article | IST-REx-ID: 11420 |
Mean-field analysis of piecewise linear solutions for wide ReLU networks
A. Shevchenko, V. Kungurtsev, M. Mondelli, Journal of Machine Learning Research 23 (2022) 1–55.
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A. Shevchenko, V. Kungurtsev, M. Mondelli, Journal of Machine Learning Research 23 (2022) 1–55.
2022 | Book (Editor) | IST-REx-ID: 11429
Web and Wireless Geographical Information Systems
F. Karimipour, S. Storandt, eds., Web and Wireless Geographical Information Systems, 1st ed., Springer Nature, Cham, 2022.
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F. Karimipour, S. Storandt, eds., Web and Wireless Geographical Information Systems, 1st ed., Springer Nature, Cham, 2022.
2022 | Book Chapter | IST-REx-ID: 11440 |
The persistent homology of dual digital image constructions
B. Bleile, A. Garin, T. Heiss, K. Maggs, V. Robins, in:, E. Gasparovic, V. Robins, K. Turner (Eds.), Research in Computational Topology 2, 1st ed., Springer Nature, Cham, 2022, pp. 1–26.
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B. Bleile, A. Garin, T. Heiss, K. Maggs, V. Robins, in:, E. Gasparovic, V. Robins, K. Turner (Eds.), Research in Computational Topology 2, 1st ed., Springer Nature, Cham, 2022, pp. 1–26.
2022 | Book Chapter | IST-REx-ID: 11456
Proteomic Analysis of C. Elegans Neurons Using TurboID-Based Proximity Labeling
M. Artan, M. de Bono, in:, D. Yamamoto (Ed.), Behavioral Neurogenetics, Springer Nature, New York, 2022, pp. 277–294.
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M. Artan, M. de Bono, in:, D. Yamamoto (Ed.), Behavioral Neurogenetics, Springer Nature, New York, 2022, pp. 277–294.
2022 | Journal Article | IST-REx-ID: 11553 |
The dynamics of complex box mappings
T. Clark, K. Drach, O. Kozlovski, S.V. Strien, Arnold Mathematical Journal 8 (2022) 319–410.
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T. Clark, K. Drach, O. Kozlovski, S.V. Strien, Arnold Mathematical Journal 8 (2022) 319–410.
2022 | Journal Article | IST-REx-ID: 11638 |
Inferring couplings in networks across order-disorder phase transitions
V. Ngampruetikorn, V. Sachdeva, J. Torrence, J. Humplik, D.J. Schwab, S.E. Palmer, Physical Review Research 4 (2022).
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V. Ngampruetikorn, V. Sachdeva, J. Torrence, J. Humplik, D.J. Schwab, S.E. Palmer, Physical Review Research 4 (2022).
2022 | Journal Article | IST-REx-ID: 11702 |
The "New Synthesis"
N.H. Barton, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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N.H. Barton, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
2022 | Journal Article | IST-REx-ID: 11713 |
Quantifying heterologous gene expression during ectopic MazF production in Escherichia coli
N. Nikolic, M. Sauert, T.G. Albanese, I. Moll, BMC Research Notes 15 (2022).
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N. Nikolic, M. Sauert, T.G. Albanese, I. Moll, BMC Research Notes 15 (2022).
2022 | Journal Article | IST-REx-ID: 11916 |
Kac regularity and domination of quadratic forms
M. Wirth, Advances in Operator Theory 7 (2022).
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M. Wirth, Advances in Operator Theory 7 (2022).