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32 Publications

2025 | Published | Journal Article | IST-REx-ID: 18820 | OA
Automatic feature selection and weighting in molecular systems using Differentiable Information Imbalance
R. Wild, F. Wodaczek, V. Del Tatto, B. Cheng, A. Laio, Nature Communications 16 (2025).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 15116 | OA
Elucidating the role of water in collagen self-assembly by isotopically modulating collagen hydration
G. Giubertoni, L. Feng, K. Klein, G. Giannetti, L. Rutten, Y. Choi, A. Van Der Net, G. Castro-Linares, F. Caporaletti, D. Micha, J. Hunger, A. Deblais, D. Bonn, N. Sommerdijk, A. Šarić, I.M. Ilie, G.H. Koenderink, S. Woutersen, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 18704 | OA
Coat stiffening can explain invagination of clathrin-coated membranes
F.F. Frey, U.S. Schwarz, Physical Review E 110 (2024).
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC | arXiv
 
2024 | Published | Journal Article | IST-REx-ID: 17050 | OA
Runaway transition in irreversible polymer condensation with cyclization
Panoukidou, Maria, Runaway transition in irreversible polymer condensation with cyclization. Physical Review Research 6 (2). 2024
[Published Version] View | Files available | DOI | arXiv
 
2024 | Published | Journal Article | IST-REx-ID: 14844 | OA
Nonadditivity in interactions between three membrane-wrapped colloidal spheres
A. Azadbakht, B. Meadowcroft, J. Majek, A. Šarić, D.J. Kraft, Biophysical Journal 123 (2024) 307–316.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 17239 | OA
In operando imaging electrostatic-driven disassembly and reassembly of collagen nanostructures
C. Garcia-Sacristan, V.G. Gisbert, K. Klein, A. Šarić, R. Garcia, ACS Nano 18 (2024) 18485–18492.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Thesis | IST-REx-ID: 18661
Archaeal membranes: In silico modelling and design
M. Santana de Freitas Amaral, Archaeal Membranes: In Silico Modelling and Design, Institute of Science and Technology Austria, 2024.
[Published Version] View | Files available | DOI
 
2024 | Draft | Preprint | IST-REx-ID: 18670 | OA
Stability vs flexibility: Reshaping archaeal membranes in silico
M. Santana de Freitas Amaral, F.F. Frey, X. Jiang, B. Baum, A. Šarić, BioRxiv (n.d.).
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
2024 | Published | Journal Article | IST-REx-ID: 15001 | OA
Self-replication of Aβ42 aggregates occurs on small and isolated fibril sites
S. Curk, J. Krausser, G. Meisl, D. Frenkel, S. Linse, T.C.T. Michaels, T.P.J. Knowles, A. Šarić, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 17460 | OA
Self-organization of mortal filaments and its role in bacterial division ring formation
Vanhille-Campos, Christian Eduardo, Self-organization of mortal filaments and its role in bacterial division ring formation. Nature Physics 20. 2024
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 18072 | OA
A liquid-like coat mediates chromosome clustering during mitotic exit
A. Hernandez-Armendariz, V. Sorichetti, Y. Hayashi, Z. Koskova, A. Brunner, J. Ellenberg, A. Šarić, S. Cuylen-Haering, Molecular Cell 84 (2024) P3254–3270.E9.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2024 | Published | Journal Article | IST-REx-ID: 18526 | OA
Endosomal membrane budding patterns in plants
E. Weiner, E. Berryman, F.F. Frey, A.G. Solís, A. Leier, T.M. Lago, A. Šarić, M.S. Otegui, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2023 | Published | Journal Article | IST-REx-ID: 13237
Amyloid formation as a protein phase transition
T.C.T. Michaels, D. Qian, A. Šarić, M. Vendruscolo, S. Linse, T.P.J. Knowles, Nature Reviews Physics 5 (2023) 379–397.
View | DOI | WoS
 
2023 | Research Data | IST-REx-ID: 14472 | OA
Stress granules plug and stabilize damaged endolysosomal membranes
C.E. Vanhille-Campos, A. Šarić, (2023).
[Published Version] View | Files available | DOI
 
2023 | Published | Journal Article | IST-REx-ID: 14610 | OA
Stress granules plug and stabilize damaged endolysosomal membranes
C. Bussi, A. Mangiarotti, C.E. Vanhille-Campos, B. Aylan, E. Pellegrino, N. Athanasiadi, A. Fearns, A. Rodgers, T.M. Franzmann, A. Šarić, R. Dimova, M.G. Gutierrez, Nature 623 (2023) 1062–1069.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
2023 | Published | Journal Article | IST-REx-ID: 12705 | OA
Structure and elasticity of model disordered, polydisperse, and defect-free polymer networks
V. Sorichetti, A. Ninarello, J. Ruiz-Franco, V. Hugouvieux, E. Zaccarelli, C. Micheletti, W. Kob, L. Rovigatti, Journal of Chemical Physics 158 (2023).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC | arXiv
 
2023 | Published | Journal Article | IST-REx-ID: 14782 | OA
Branched actin cortices reconstituted in vesicles sense membrane curvature
L. Baldauf, F.F. Frey, M. Arribas Perez, T. Idema, G.H. Koenderink, Biophysical Journal 122 (2023) 2311–2324.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2023 | Published | Journal Article | IST-REx-ID: 14788 | OA
Clathrin coats partially preassemble and subsequently bend during endocytosis
M. Mund, A. Tschanz, Y.-L. Wu, F.F. Frey, J.L. Mehl, M. Kaksonen, O. Avinoam, U.S. Schwarz, J. Ries, Journal of Cell Biology 222 (2023).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2023 | Published | Journal Article | IST-REx-ID: 14655 | OA
Transverse fluctuations control the assembly of semiflexible filaments
V. Sorichetti, M. Lenz, Physical Review Letters 131 (2023).
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC | arXiv
 
2023 | Published | Journal Article | IST-REx-ID: 14442 | OA
Mixtures of self-propelled particles interacting with asymmetric obstacles
Rojas Vega, Mauricio Nicolas, Mixtures of self-propelled particles interacting with asymmetric obstacles. The European Physical Journal E 46 (10). 2023
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC | arXiv
 

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