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196 Publications
2025 | Published | Journal Article | IST-REx-ID: 19453 | 
Chiossi, H. S. C., Nardin, M., Tkačik, G., & Csicsvari, J. L. (2025). Learning reshapes the hippocampal representation hierarchy. Proceedings of the National Academy of Sciences. National Academy of Sciences. https://doi.org/10.1073/pnas.2417025122
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2025 | Research Data | IST-REx-ID: 18991 |
Chiossi, H. S. C. (2025). Research data for the publication “Learning reshapes the hippocampal representation hierarchy.” Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:18991
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2025 | Published | Journal Article | IST-REx-ID: 18849 |
Sokolowski, T. R., Gregor, T., Bialek, W., & Tkačik, G. (2025). Deriving a genetic regulatory network from an optimization principle. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.2402925121
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2025 | Published | Journal Article | IST-REx-ID: 19701 |
Tkačik, G., & Wolde, P. R. T. (2025). Information processing in biochemical networks. Annual Review of Biophysics. Annual Reviews. https://doi.org/10.1146/annurev-biophys-060524-102720
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2025 | Published | Journal Article | IST-REx-ID: 18936 |
Grah, R., Guet, C. C., Tkačik, G., & Lagator, M. (2025). Linking molecular mechanisms to their evolutionary consequences: a primer. Genetics. Oxford University Press. https://doi.org/10.1093/genetics/iyae191
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2025 | Published | Journal Article | IST-REx-ID: 18850 |
Perkins, M. L., Crocker, J., & Tkačik, G. (2025). Chromatin enables precise and scalable gene regulation with factors of limited specificity. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.2411887121
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2025 | Published | Journal Article | IST-REx-ID: 19785 |
Kavcic, B., & Tkačik, G. (2025). Token-driven totally asymmetric simple exclusion processes. Physical Review E. American Physical Society. https://doi.org/10.1103/physreve.111.054122
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2025 | Research Data | IST-REx-ID: 19658 |
Tkačik, G. (2025). Token-driven totally asymmetric simple exclusion processes. Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:19658
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2025 | Published | Journal Article | IST-REx-ID: 19626 |
Jain, K., Hauschild, R., Bochkareva, O., Römhild, R., Tkačik, G., & Guet, C. C. (2025). Pulsatile basal gene expression as a fitness determinant in bacteria. Proceedings of the National Academy of Sciences. National Academy of Sciences. https://doi.org/10.1073/pnas.2413709122
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2025 | Research Data | IST-REx-ID: 19294 |
Jain, K., Hauschild, R., Bochkareva, O., Römhild, R., Tkačik, G., & Guet, C. C. (2025). Data for “Pulsatile basal gene expression as a fitness determinant in bacteria.” Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:19294
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2024 | Published | Journal Article | IST-REx-ID: 14901 |
Nomura, K., Rella, S., Merritt, H., Baltussen, M., Bird, D., Tjuka, A., & Falk, D. (2024). Tipping points of space debris in low earth orbit. International Journal of the Commons. Ubiquity Press. https://doi.org/10.5334/ijc.1275
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2024 | Published | Journal Article | IST-REx-ID: 18307 |
Rella, S., Kulikova, Y. A., Minnegalieva, A., & Kondrashov, F. (2024). Complex vaccination strategies prevent the emergence of vaccine resistance. Evolution: International Journal of Organic Evolution. Oxford University Press. https://doi.org/10.1093/evolut/qpae106
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2024 | Published | Journal Article | IST-REx-ID: 18525 |
Ruzickova, N., Hledik, M., & Tkačik, G. (2024). Quantitative omnigenic model discovers interpretable genome-wide associations. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.2402340121
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2024 | Published | Journal Article | IST-REx-ID: 17123 |
Brückner, D., & Tkačik, G. (2024). Information content and optimization of self-organized developmental systems. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.2322326121
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2024 | Published | Thesis | IST-REx-ID: 15020 |
Hledik, M. (2024). Genetic information and biological optimization. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:15020
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2024 | Published | Journal Article | IST-REx-ID: 18902 |
Zagorski, M., Brandenberg, N., Lutolf, M., Tkačik, G., Bollenbach, M. T., Briscoe, J., & Kicheva, A. (2024). Assessing the precision of morphogen gradients in neural tube development. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-024-45148-8
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2023 | Published | Journal Article | IST-REx-ID: 14515 |
Reinhardt, M., Tkačik, G., & Ten Wolde, P. R. (2023). Path weight sampling: Exact Monte Carlo computation of the mutual information between stochastic trajectories. Physical Review X. American Physical Society. https://doi.org/10.1103/PhysRevX.13.041017
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2023 | Published | Journal Article | IST-REx-ID: 13127 |
Casillas Perez, B. E., Bodova, K., Grasse, A. V., Tkačik, G., & Cremer, S. (2023). Dynamic pathogen detection and social feedback shape collective hygiene in ants. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-023-38947-y
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2023 | Published | Journal Article | IST-REx-ID: 12487 |
Scarpetta, S., Morrisi, N., Mutti, C., Azzi, N., Trippi, I., Ciliento, R., … Vaudano, A. E. (2023). Criticality of neuronal avalanches in human sleep and their relationship with sleep macro- and micro-architecture. IScience. Elsevier. https://doi.org/10.1016/j.isci.2023.107840
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2023 | Published | Journal Article | IST-REx-ID: 14402 |
Lombardi, F., Herrmann, H. J., Parrino, L., Plenz, D., Scarpetta, S., Vaudano, A. E., … Shriki, O. (2023). Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state. Cell Reports. Elsevier. https://doi.org/10.1016/j.celrep.2023.113162
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