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203 Publications
2026 |
Published |
Journal Article |
IST-REx-ID: 21282 |
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Brückner D, Tkačik G. 2026. Marr’s three levels for embryonic development: Information, dynamical systems, gene networks. PRX Life. 4, 017001.
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| arXiv
2026 |
Epub ahead of print |
Journal Article |
IST-REx-ID: 21759 |
Mascolo E, Körei RE, Borst NO, Barton NH, Crocker J, Tkačik G. 2026. Long-term evolution of regulatory DNA sequences. Part 2: Theory and future challenges. Current Opinion in Genetics and Development. 98, 102472.
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2025 |
Published |
Journal Article |
IST-REx-ID: 19785 |
Kavcic B, Tkačik G. 2025. Token-driven totally asymmetric simple exclusion processes. Physical Review E. 111(5), 054122.
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| WoS
2025 |
Published |
Journal Article |
IST-REx-ID: 18849 |
Sokolowski TR, Gregor T, Bialek W, Tkačik G. 2025. Deriving a genetic regulatory network from an optimization principle. Proceedings of the National Academy of Sciences. 122(1), e2402925121.
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| PubMed | Europe PMC
2025 |
Published |
Journal Article |
IST-REx-ID: 18936 |
Grah R, Guet CC, Tkačik G, Lagator M. 2025. Linking molecular mechanisms to their evolutionary consequences: a primer. Genetics. 229(2), iyae191.
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2025 |
Research Data |
IST-REx-ID: 19658 |
Tkačik G. 2025. Token-driven totally asymmetric simple exclusion processes, Institute of Science and Technology Austria, 10.15479/AT:ISTA:19658.
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2025 |
Published |
Journal Article |
IST-REx-ID: 19701 |
Tkačik G, Wolde PRT. 2025. Information processing in biochemical networks. Annual review of biophysics. 54, 249–274.
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2025 |
Published |
Journal Article |
IST-REx-ID: 21269 |
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Zhang CY, Rosa A, Sanguinetti G. 2025. bioSBM: A random graph model to integrate epigenomic data in chromatin structure prediction. PRX Life. 3(4), 043006.
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| arXiv
2025 |
Published |
Thesis | PhD |
IST-REx-ID: 20357
Ruzickova N. 2025. Effect propagation in biological networks. Institute of Science and Technology Austria.
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2025 |
Published |
Thesis | PhD |
IST-REx-ID: 20811 |
Rella S. 2025. Adaptive processes in biology and culture : Models of evolving vaccine resistance and the record statistics of innovation. Institute of Science and Technology Austria.
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2025 |
Published |
Journal Article |
IST-REx-ID: 18850 |
Perkins ML, Crocker J, Tkačik G. 2025. Chromatin enables precise and scalable gene regulation with factors of limited specificity. Proceedings of the National Academy of Sciences. 122(1), e2411887121.
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2025 |
Published |
Journal Article |
IST-REx-ID: 19453 |
Chiossi HSC, Nardin M, Tkačik G, Csicsvari JL. 2025. Learning reshapes the hippocampal representation hierarchy. Proceedings of the National Academy of Sciences. 122(11), e2417025122.
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2025 |
Research Data |
IST-REx-ID: 18991 |
Chiossi HSC. 2025. Research data for the publication ‘Learning reshapes the hippocampal representation hierarchy’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:18991.
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2025 |
Published |
Journal Article |
IST-REx-ID: 20664 |
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Kapoor L, Ruzickova N, Zivadinovic P, Leitner V, Sisak MA, Mweka CN, Dobbelaere JA, Katsaros G, Schanda P. 2025. Quantifying the carbon footprint of conference travel: The case of NMR meetings. Magnetic Resonance. 6(2), 243–256.
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2025 |
Published |
Journal Article |
IST-REx-ID: 19626 |
Jain K, Hauschild R, Bochkareva O, Römhild R, Tkačik G, Guet CC. 2025. Pulsatile basal gene expression as a fitness determinant in bacteria. Proceedings of the National Academy of Sciences. 122(15), e2413709122.
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2025 |
Research Data |
IST-REx-ID: 19294 |
Jain K, Hauschild R, Bochkareva O, Römhild R, Tkačik G, Guet CC. 2025. Data for ‘Pulsatile basal gene expression as a fitness determinant in bacteria’, Institute of Science and Technology Austria, 10.15479/AT:ISTA:19294.
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2024 |
Published |
Journal Article |
IST-REx-ID: 14901 |
Nomura K, Rella S, Merritt H, Baltussen M, Bird D, Tjuka A, Falk D. 2024. Tipping points of space debris in low earth orbit. International Journal of the Commons. 18(1).
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2024 |
Published |
Journal Article |
IST-REx-ID: 17123 |
Brückner D, Tkačik G. 2024. Information content and optimization of self-organized developmental systems. Proceedings of the National Academy of Sciences of the United States of America. 121(23), e2322326121.
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2024 |
Published |
Journal Article |
IST-REx-ID: 18525 |
Ruzickova N, Hledik M, Tkačik G. 2024. Quantitative omnigenic model discovers interpretable genome-wide associations. Proceedings of the National Academy of Sciences of the United States of America. 121(44), e2402340121.
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2024 |
Published |
Journal Article |
IST-REx-ID: 18307 |
Rella S, Kulikova YA, Minnegalieva A, Kondrashov F. 2024. Complex vaccination strategies prevent the emergence of vaccine resistance. Evolution: International journal of organic evolution. 78(10), 1722–1738.
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