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4241 Publications
2013 | Journal Article | IST-REx-ID: 10895 | 
Vanneste S, Friml J. 2013. Calcium: The missing link in auxin action. Plants. 2(4), 650–675.
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2013 | Conference Paper | IST-REx-ID: 10902
Chatterjee K, Chaubal S, Rubin S. 2013. How to travel between languages. 7th International Conference on Language and Automata Theory and Applications. LATA: Conference on Language and Automata Theory and ApplicationsLNCS, LNCS, vol. 7810, 214–225.
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| DOI
2013 | Book Chapter | IST-REx-ID: 10900
Weber M, Sixt MK. 2013.Live Cell Imaging of Chemotactic Dendritic Cell Migration in Explanted Mouse Ear Preparations. In: Chemokines. Methods in Molecular Biology, vol. 1013, 215–226.
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2013 | Conference Paper | IST-REx-ID: 10898
Haas A, Lippautz M, Henzinger TA, Payer H, Sokolova A, Kirsch CM, Sezgin A. 2013. Distributed queues in shared memory: Multicore performance and scalability through quantitative relaxation. Proceedings of the ACM International Conference on Computing Frontiers - CF ’13. CF: Conference on Computing Frontiers, 17.
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2013 | Conference Paper | IST-REx-ID: 1374 |
Chatterjee K, Fijalkow N. 2013. Infinite-state games with finitary conditions. 22nd EACSL Annual Conference on Computer Science Logic. CSL: Computer Science LogicLeibniz International Proceedings in Informatics, LIPIcs, vol. 23, 181–196.
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2013 | Conference Paper | IST-REx-ID: 1385 |
Hofferek G, Gupta A, Könighofer B, Jiang J, Bloem R. 2013. Synthesizing multiple boolean functions using interpolation on a single proof. 2013 Formal Methods in Computer-Aided Design. FMCAD: Formal Methods in Computer-Aided Design, 77–84.
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| arXiv
2013 | Conference Paper | IST-REx-ID: 1387 |
Boker U, Kuperberg D, Kupferman O, Skrzypczak M. 2013. Nondeterminism in the presence of a diverse or unknown future. 7966(PART 2), 89–100.
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2013 | Thesis | IST-REx-ID: 1406
Campinho P. 2013. Mechanics of zebrafish epiboly: Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading. IST Austria.
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2013 | Journal Article | IST-REx-ID: 2010 |
Uhler C, Raskutti G, Bühlmann P, Yu B. 2013. Geometry of the faithfulness assumption in causal inference. The Annals of Statistics. 41(2), 436–463.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2009 |
Uhler C, Slavkovic A, Fienberg S. 2013. Privacy-preserving data sharing for genome-wide association studies. Journal of Privacy and Confidentiality . 5(1), 137–166.
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2013 | Conference Paper | IST-REx-ID: 2181 |
Henzinger TA, Kirsch C, Payer H, Sezgin A, Sokolova A. 2013. Quantitative relaxation of concurrent data structures. Proceedings of the 40th annual ACM SIGPLAN-SIGACT symposium on Principles of programming language. POPL: Principles of Programming Languages, 317–328.
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2013 | Conference Paper | IST-REx-ID: 2209
Biedl T, Held M, Huber S. 2013. Recognizing straight skeletons and Voronoi diagrams and reconstructing their input. ISVD: Voronoi Diagrams in Science and Engineering, 2013 10th International Symposium on Voronoi Diagrams in Science and Engineering (ISVD 2013) , , 37–46.
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2013 | Conference Paper | IST-REx-ID: 2210 |
Biedl T, Held M, Huber S. 2013. Reconstructing polygons from embedded straight skeletons. 29th European Workshop on Computational Geometry. EuroCG: European Workshop on Computational Geometry, 95–98.
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2013 | Conference Paper | IST-REx-ID: 2237 |
Blanc R, Gupta A, Kovács L, Kragl B. 2013. Tree interpolation in Vampire. 8312, 173–181.
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2013 | Conference Paper | IST-REx-ID: 2243 |
Michaliszyn J, Otop J. 2013. Elementary modal logics over transitive structures. 23, 563–577.
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2013 | Conference Paper | IST-REx-ID: 2244 |
Matoušek J, Sedgwick E, Tancer M, Wagner U. 2013. Untangling two systems of noncrossing curves. 8242, 472–483.
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2013 | Conference Paper | IST-REx-ID: 2259 |
Alwen JF, Krenn S, Pietrzak KZ, Wichs D. 2013. Learning with rounding, revisited: New reduction properties and applications. 8042(1), 57–74.
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2013 | Conference Paper | IST-REx-ID: 2258 |
Kiltz E, Pietrzak KZ, Szegedy M. 2013. Digital signatures with minimal overhead from indifferentiable random invertible functions. 8042, 571–588.
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2013 | Journal Article | IST-REx-ID: 2256 |
Danowski P, Goldfarb D, Schaffner V, Seidler W. 2013. Linked (Open) Data - Bibliographische Daten im Semantic Web. VÖB Mitteilungen. 66(3/4), 559–587.
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2013 | Conference Paper | IST-REx-ID: 2260 |
Bernhard D, Fuchsbauer G, Ghadafi E. 2013. Efficient signatures of knowledge and DAA in the standard model. 7954, 518–533.
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2013 | Journal Article | IST-REx-ID: 2264 |
Liang H, Xiao G, Yin H, Hippenmeyer S, Horowitz J, Ghashghaei T. 2013. Neural development is dependent on the function of specificity protein 2 in cell cycle progression. Development. 140(3), 552–561.
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2013 | Conference Paper | IST-REx-ID: 2272 |
Takhanov R, Kolmogorov V. 2013. Inference algorithms for pattern-based CRFs on sequence data. ICML’13 Proceedings of the 30th International Conference on International. ICML: International Conference on Machine Learning, JMLR, vol. 28, 145–153.
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2013 | Conference Paper | IST-REx-ID: 2270 |
Bachrach Y, Kohli P, Kolmogorov V, Zadimoghaddam M. 2013. Optimal Coalition Structures in Cooperative Graph Games. AAAI: Conference on Artificial Intelligence, 81–87.
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2013 | Report | IST-REx-ID: 2274 |
Dziembowski S, Faust S, Kolmogorov V, Pietrzak KZ. 2013. Proofs of Space, IST Austria,p.
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2013 | Report | IST-REx-ID: 2273 |
Kolmogorov V. 2013. Reweighted message passing revisited, IST Austria,p.
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2013 | Journal Article | IST-REx-ID: 2278
Pérez Gómez R, Slovakova J, Rives Quinto N, Krejčí A, Carmena A. 2013. A serrate-notch-canoe complex mediates essential interactions between glia and neuroepithelial cells during Drosophila optic lobe development. Journal of Cell Science. 126(21), 4873–4884.
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2013 | Conference Paper | IST-REx-ID: 2276 |
Gridchyn I, Kolmogorov V. 2013. Potts model, parametric maxflow and k-submodular functions. ICCV: International Conference on Computer Vision, 2320–2327.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2280 |
Uhler C, Wright S. 2013. Packing ellipsoids with overlap. SIAM Review. 55(4), 671–706.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2287 |
Pickup M, Barrett S. 2013. The influence of demography and local mating environment on sex ratios in a wind-pollinated dioecious plant. Ecology and Evolution. 3(3), 629–639.
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2013 | Journal Article | IST-REx-ID: 2282 |
Campinho P, Behrndt M, Ranft J, Risler T, Minc N, Heisenberg C-PJ. 2013. Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading during zebrafish epiboly. Nature Cell Biology. 15, 1405–1414.
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2013 | Journal Article | IST-REx-ID: 2286 |
Campinho P, Heisenberg C-PJ. 2013. The force and effect of cell proliferation. EMBO Journal. 32(21), 2783–2784.
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2013 | Journal Article | IST-REx-ID: 2289 |
Henzinger TA. 2013. Quantitative reactive modeling and verification. Computer Science Research and Development. 28(4), 331–344.
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2013 | Journal Article | IST-REx-ID: 2290 |
Boutté Y, Jonsson K, Mcfarlane H, Johnson E, Gendre D, Swarup R, Friml J, Samuels L, Robert S, Bhalerao R. 2013. ECHIDNA mediated post Golgi trafficking of auxin carriers for differential cell elongation. PNAS. 110(40), 16259–16264.
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2013 | Conference Paper | IST-REx-ID: 2294 |
Kazmar T, Kvon E, Stark A, Lampert C. 2013. Drosophila Embryo Stage Annotation using Label Propagation. ICCV: International Conference on Computer Vision.
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2013 | Conference Paper | IST-REx-ID: 2293 |
Sharmanska V, Quadrianto N, Lampert C. 2013. Learning to rank using privileged information. ICCV: International Conference on Computer Vision, 825–832.
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2013 | Conference Paper | IST-REx-ID: 2291 |
Ferrara A, Fuchsbauer G, Warinschi B. 2013. Cryptographically enforced RBAC. CSF: Computer Security Foundations, 115–129.
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2013 | Conference Paper | IST-REx-ID: 2298 |
Dragoi C, Enea C, Sighireanu M. 2013. Local shape analysis for overlaid data structures. SAS: Static Analysis Symposium, LNCS, vol. 7935, 150–171.
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2013 | Journal Article | IST-REx-ID: 2299 |
Godhal Y, Chatterjee K, Henzinger TA. 2013. Synthesis of AMBA AHB from formal specification: A case study. International Journal on Software Tools for Technology Transfer. 15(5–6), 585–601.
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2013 | Journal Article | IST-REx-ID: 2297 |
Seiringer R. 2013. Hot topics in cold gases: A mathematical physics perspective. Japanese Journal of Mathematics. 8(2), 185–232.
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2013 | Book | IST-REx-ID: 2306 |
Danowski P, Pohl A. 2013. (Open) Linked Data in Bibliotheken, De Gruyter,p.
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2013 | Conference Paper | IST-REx-ID: 2305 |
Brázdil T, Chatterjee K, Forejt V, Kučera A. 2013. Trading performance for stability in Markov decision processes. 28th Annual ACM/IEEE Symposium. LICS: Logic in Computer Science, 331–340.
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2013 | Conference Paper | IST-REx-ID: 2301
Desai A, Gupta V, Jackson E, Qadeer S, Rajamani S, Zufferey D. 2013. P: Safe asynchronous event-driven programming. Proceedings of the 34th ACM SIGPLAN Conference on Programming Language Design and Implementation. PLDI: Programming Languages Design and Implementation, 321–331.
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2013 | Journal Article | IST-REx-ID: 2300 |
Giuliani A, Lieb É, Seiringer R. 2013. Realization of stripes and slabs in two and three dimensions. Physical Review B. 88(6), 064401.
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| arXiv
2013 | Conference Paper | IST-REx-ID: 2328 |
Henzinger TA, Sezgin A, Vafeiadis V. 2013. Aspect-oriented linearizability proofs. 8052, 242–256.
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2013 | Journal Article | IST-REx-ID: 2412 |
Kupczok A, Bollback JP. 2013. Probabilistic models for CRISPR spacer content evolution . BMC Evolutionary Biology. 13(1), 54–54.
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2013 | Journal Article | IST-REx-ID: 2410 |
Fernandes Redondo RA, Kupczok A, Stift G, Bollback JP. 2013. Complete genome sequence of the novel phage MG-B1 infecting bacillus weihenstephanensis. Genome Announcements. 1(3).
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2013 | Conference Paper | IST-REx-ID: 2445 |
Cerny P, Henzinger TA, Radhakrishna A, Ryzhyk L, Tarrach T. 2013. Efficient synthesis for concurrency by semantics-preserving transformations. CAV: Computer Aided Verification, LNCS, vol. 8044, 951–967.
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2013 | Conference Paper | IST-REx-ID: 2447 |
Piskac R, Wies T, Zufferey D. 2013. Automating separation logic using SMT. 8044, 773–789.
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2013 | Journal Article | IST-REx-ID: 2443 |
Simon S, Kubeš M, Baster P, Robert S, Dobrev P, Friml J, Petrášek J, Zažímalová E. 2013. Defining the selectivity of processes along the auxin response chain: A study using auxin analogues. New Phytologist. 200(4), 1034–1048.
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2013 | Conference Paper | IST-REx-ID: 2446 |
Chatterjee K, Gaiser A, Kretinsky J. 2013. Automata with generalized Rabin pairs for probabilistic model checking and LTL synthesis. 8044, 559–575.
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| arXiv
2013 | Conference Paper | IST-REx-ID: 2444 |
Chatterjee K, Ła̧Cki J. 2013. Faster algorithms for Markov decision processes with low treewidth. 8044, 543–558.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2448 |
Remy E, Baster P, Friml J, Duque P. 2013. ZIFL1.1 transporter modulates polar auxin transport by stabilizing membrane abundance of multiple PINs in Arabidopsis root tip. Plant Signaling & Behavior. 8(10), e25688.
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2013 | Journal Article | IST-REx-ID: 2471 |
Sanchez-Romero I, Ariza A, Wilson K, Skjøt M, Vind J, De Maria L, Skov L, Sánchez Ruiz J. 2013. Mechanism of protein kinetic stabilization by engineered disulfide crosslinks. PLoS One. 8(7), e70013.
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2013 | Journal Article | IST-REx-ID: 2472 |
Cazzonelli C, Vanstraelen M, Simon S, Yin K, Carron Arthur A, Nisar N, Tarle G, Cuttriss A, Searle I, Benková E, Mathesius U, Masle J, Friml J, Pogson B. 2013. Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development. PLoS One. 8(7), e70069.
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2013 | Journal Article | IST-REx-ID: 2470 |
Čovanová M, Sauer M, Rychtář J, Friml J, Petrášek J, Zažímalová E. 2013. Overexpression of the auxin binding PROTEIN1 modulates PIN-dependent auxin transport in tobacco cells. PLoS One. 8(7), e70050.
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2013 | Journal Article | IST-REx-ID: 2466 |
Ando R, Thuerey N, Wojtan C. 2013. Highly adaptive liquid simulations on tetrahedral meshes. ACM Transactions on Graphics. 32(4), 103.
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2013 | Journal Article | IST-REx-ID: 2467 |
Bernstein G, Wojtan C. 2013. Putting holes in holey geometry: Topology change for arbitrary surfaces. ACM Transactions on Graphics. 32(4), 34.
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2013 | Journal Article | IST-REx-ID: 2468 |
Bojsen-Hansen M, Wojtan C. 2013. Liquid surface tracking with error compensation. ACM Transactions on Graphics. 32(4), 68.
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2013 | Journal Article | IST-REx-ID: 2469 |
Maître J-L, Heisenberg C-PJ. 2013. Three functions of cadherins in cell adhesion. Current Biology. 23(14), R626–R633.
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2013 | Journal Article | IST-REx-ID: 2473 |
Barton NH, Etheridge A, Kelleher J, Véber A. 2013. Genetic hitch-hiking in spatially extended populations. Theoretical Population Biology. 87(8), 75–89.
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2013 | Conference Paper | IST-REx-ID: 2517 |
Almagor S, Boker U, Kupferman O. 2013. Formalizing and reasoning about quality. 7966(Part 2), 15–27.
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2013 | Conference Paper | IST-REx-ID: 2518 |
Kolmogorov V. 2013. The power of linear programming for finite-valued CSPs: A constructive characterization. ICALP: Automata, Languages and Programming, LNCS, vol. 7965, 625–636.
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| arXiv
2013 | Conference Paper | IST-REx-ID: 2520 |
Quadrianto N, Sharmanska V, Knowles D, Ghahramani Z. 2013. The supervised IBP: Neighbourhood preserving infinite latent feature models. Proceedings of the 29th conference uncertainty in Artificial Intelligence. UAI: Uncertainty in Artificial Intelligence, 527–536.
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2013 | Journal Article | IST-REx-ID: 2698 |
Erdös L, Fournais S, Solovej J. 2013. Stability and semiclassics in self-generated fields. Journal of the European Mathematical Society. 15(6), 2093–2113.
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| arXiv
2013 | Conference Paper | IST-REx-ID: 2718 |
Barton NH, Paixao T. 2013. Can quantitative and population genetics help us understand evolutionary computation? Proceedings of the 15th annual conference on Genetic and evolutionary computation. GECCO: Genetic and evolutionary computation conference, 1573–1580.
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2013 | Journal Article | IST-REx-ID: 2720 |
Long H, Paixao T, Azevedo R, Zufall R. 2013. Accumulation of spontaneous mutations in the ciliate Tetrahymena thermophila. Genetics. 195(2), 527–540.
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2013 | Conference Paper | IST-REx-ID: 2719
Paixao T, Barton NH. 2013. A variance decomposition approach to the analysis of genetic algorithms. Proceedings of the 15th annual conference on Genetic and evolutionary computation. GECCO: Genetic and evolutionary computation conference, 845–852.
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2013 | Journal Article | IST-REx-ID: 2782 |
Erdös L, Farrell B. 2013. Local eigenvalue density for general MANOVA matrices. Journal of Statistical Physics. 152(6), 1003–1032.
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| arXiv
2013 | Conference Paper | IST-REx-ID: 2807 |
Čadek M, Krcál M, Matoušek J, Vokřínek L, Wagner U. 2013. Extending continuous maps: Polynomiality and undecidability. 45th Annual ACM Symposium on theory of computing. STOC: Symposium on the Theory of Computing, 595–604.
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2013 | Journal Article | IST-REx-ID: 2808 |
Landberg K, Pederson E, Viaene T, Bozorg B, Friml J, Jönsson H, Thelander M, Sundberg E. 2013. The moss physcomitrella patens reproductive organ development is highly organized, affected by the two SHI/STY genes and by the level of active auxin in the SHI/STY expression domain. Plant Physiology. 162(3), 1406–1419.
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2013 | Journal Article | IST-REx-ID: 2810 |
de Vos M, Poelwijk F, Battich N, Ndika J, Tans S. 2013. Environmental dependence of genetic constraint. PLoS Genetics. 9(6), e1003580.
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2013 | Journal Article | IST-REx-ID: 2814 |
Chatterjee K, Alfaro L, Majumdar R. 2013. The complexity of coverage. International Journal of Foundations of Computer Science. 24(2), 165–185.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2811 |
Avila M, Hof B. 2013. Nature of laminar-turbulence intermittency in shear flows. Physical Review E. 87(6), 063012.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2813 |
Samanta D, Dubief Y, Holzner M, Schäfer C, Morozov A, Wagner C, Hof B. 2013. Elasto-inertial turbulence. PNAS. 110(26), 10557–10562.
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2013 | Conference Paper | IST-REx-ID: 2812 |
Attali D, Bauer U, Devillers O, Glisse M, Lieutier A. 2013. Homological reconstruction and simplification in R3. Proceedings of the 29th annual symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, 117–125.
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2013 | Journal Article | IST-REx-ID: 2817 |
Novak S, Chatterjee K, Nowak M. 2013. Density games. Journal of Theoretical Biology. 334, 26–34.
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2013 | Journal Article | IST-REx-ID: 2816 |
Božić I, Reiter J, Allen B, Antal T, Chatterjee K, Shah P, Moon Y, Yaqubie A, Kelly N, Le D, Lipson E, Chapman P, Diaz L, Vogelstein B, Nowak M. 2013. Evolutionary dynamics of cancer in response to targeted combination therapy. eLife. 2, e00747.
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2013 | Conference Paper | IST-REx-ID: 2819 |
Chatterjee K, Prabhu V. 2013. Quantitative timed simulation functions and refinement metrics for real-time systems. Proceedings of the 16th International Conference on Hybrid Systems: Computation and Control. HSCC: Hybrid Systems - Computation and Control vol. 1, 273–282.
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2013 | Journal Article | IST-REx-ID: 2818 |
Rajan K, Marre O, Tkačik G. 2013. Learning quadratic receptive fields from neural responses to natural stimuli. Neural Computation. 25(7), 1661–1692.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2822 |
Topp C, Iyer Pascuzzi A, Anderson J, Lee C, Zurek P, Symonova O, Zheng Y, Bucksch A, Mileyko Y, Galkovskyi T, Moore B, Harer J, Edelsbrunner H, Mitchell Olds T, Weitz J, Benfey P. 2013. 3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture. PNAS. 110(18), E1695–E1704.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 2821 |
Remy E, Cabrito T, Baster P, Batista R, Teixeira M, Friml J, Sá Correia I, Duque P. 2013. A major facilitator superfamily transporter plays a dual role in polar auxin transport and drought stress tolerance in Arabidopsis. Plant Cell. 25(3), 901–926.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 2827 |
Du Y, Tejos R, Beck M, Himschoot E, Li H, Robatzek S, Vanneste S, Friml J. 2013. Salicylic acid interferes with clathrin-mediated endocytic protein trafficking. PNAS. 110(19), 7946–7951.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 2832 |
Tanaka H, Kitakura S, Rakusová H, Uemura T, Feraru M, De Rycke R, Robert S, Kakimoto T, Friml J. 2013. Cell polarity and patterning by PIN trafficking through early endosomal compartments in arabidopsis thaliana. PLoS Genetics. 9(5), e1003540.
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2013 | Journal Article | IST-REx-ID: 2828 |
Kolmogorov V, Živný S. 2013. The complexity of conservative valued CSPs. Journal of the ACM. 60(2), 10.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2829 |
Shi L, Avila M, Hof B. 2013. Scale invariance at the onset of turbulence in couette flow. Physical Review Letters. 110(20), 204502.
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| arXiv