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5872 Publications
2024 | Research Data | IST-REx-ID: 15385 |

Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice
L. Burnett, P. Koppensteiner, O. Symonova, T. Masson, T.A. Vega Zuniga, X. Contreras, T. Rülicke, R. Shigemoto, G. Novarino, M.A. Jösch, (2024).
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L. Burnett, P. Koppensteiner, O. Symonova, T. Masson, T.A. Vega Zuniga, X. Contreras, T. Rülicke, R. Shigemoto, G. Novarino, M.A. Jösch, (2024).
2024 | Published | Thesis | IST-REx-ID: 18766 |

Elucidating the structural determinants of the poxvirus core using multi-modal cryo-EM
J. Datler, Elucidating the Structural Determinants of the Poxvirus Core Using Multi-Modal Cryo-EM, Institute of Science and Technology Austria, 2024.
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J. Datler, Elucidating the Structural Determinants of the Poxvirus Core Using Multi-Modal Cryo-EM, Institute of Science and Technology Austria, 2024.
2024 | Published | Journal Article | IST-REx-ID: 14979 |

Multi-modal cryo-EM reveals trimers of protein A10 to form the palisade layer in poxvirus cores
J. Datler, J. Hansen, A. Thader, A. Schlögl, L.W. Bauer, V.-V. Hodirnau, F.K. Schur, Nature Structural & Molecular Biology 31 (2024) 1114–1123.
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J. Datler, J. Hansen, A. Thader, A. Schlögl, L.W. Bauer, V.-V. Hodirnau, F.K. Schur, Nature Structural & Molecular Biology 31 (2024) 1114–1123.
2024 | Published | Journal Article | IST-REx-ID: 17124 |

Solution-processed, surface-engineered, polycrystalline CdSe-SnSe exhibiting low thermal conductivity
C. Fiedler, Y. Liu, M. Ibáñez, Journal of Visualized Experiments 2024 (2024).
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C. Fiedler, Y. Liu, M. Ibáñez, Journal of Visualized Experiments 2024 (2024).
2024 | Published | Journal Article | IST-REx-ID: 14886 |

Dispersive effects in ultrafast nonlinear phenomena: The case of optical Kerr effect
D. Lorenc, Z. Alpichshev, Physical Review Research 6 (2024).
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D. Lorenc, Z. Alpichshev, Physical Review Research 6 (2024).
2024 | Published | Thesis | IST-REx-ID: 17490 |

Communication-efficient distributed training of deep neural networks : An algorithms and systems perspective
I. Markov, Communication-Efficient Distributed Training of Deep Neural Networks : An Algorithms and Systems Perspective, Institute of Science and Technology Austria, 2024.
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I. Markov, Communication-Efficient Distributed Training of Deep Neural Networks : An Algorithms and Systems Perspective, Institute of Science and Technology Austria, 2024.
2024 | Published | Conference Paper | IST-REx-ID: 17456 |

L-GreCo: Layerwise-adaptive gradient compression for efficient data-parallel deep learning
I. Markov, K. Alimohammadi, E. Frantar, D.-A. Alistarh, in:, P. Gibbons, G. Pekhimenko, C. De Sa (Eds.), Proceedings of Machine Learning and Systems , Association for Computing Machinery, 2024.
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I. Markov, K. Alimohammadi, E. Frantar, D.-A. Alistarh, in:, P. Gibbons, G. Pekhimenko, C. De Sa (Eds.), Proceedings of Machine Learning and Systems , Association for Computing Machinery, 2024.
2024 | Published | Journal Article | IST-REx-ID: 15249 |

Large-scale excess H I absorption around z ≈ 4 galaxies detected in a background galaxy spectrum in the MUSE eXtremely deep field
J.J. Matthee, C. Golling, R. Mackenzie, G. Pezzulli, S. Lilly, J. Schaye, R. Bacon, H. Kusakabe, T. Urrutia, L. Boogaard, J. Brinchmann, M.V. Maseda, T. Garel, N.F. Bouché, L. Wisotzki, Monthly Notices of the Royal Astronomical Society 529 (2024) 2794–2806.
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J.J. Matthee, C. Golling, R. Mackenzie, G. Pezzulli, S. Lilly, J. Schaye, R. Bacon, H. Kusakabe, T. Urrutia, L. Boogaard, J. Brinchmann, M.V. Maseda, T. Garel, N.F. Bouché, L. Wisotzki, Monthly Notices of the Royal Astronomical Society 529 (2024) 2794–2806.
2024 | Published | Journal Article | IST-REx-ID: 17890 |

Single-nucleus atlas of the Artemia female reproductive system suggests germline repression of the Z chromosome
M.N. Elkrewi, B. Vicoso, PLoS Genetics 20 (2024).
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M.N. Elkrewi, B. Vicoso, PLoS Genetics 20 (2024).
2024 | Published | Journal Article | IST-REx-ID: 15009 |

Chromosome-level assembly of Artemia franciscana sheds light on sex chromosome differentiation
V.K. Bett, A. Macon, B. Vicoso, M.N. Elkrewi, Genome Biology and Evolution 16 (2024).
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V.K. Bett, A. Macon, B. Vicoso, M.N. Elkrewi, Genome Biology and Evolution 16 (2024).
2024 | Published | Conference Paper | IST-REx-ID: 18928 |

On the complexity of algorithms with predictions for dynamic graph problems
M. Henzinger, B. Saha, M.P. Seybold, C. Ye, in:, 15th Innovations in Theoretical Computer Science Conference, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2024, p. 62:1-62:25.
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M. Henzinger, B. Saha, M.P. Seybold, C. Ye, in:, 15th Innovations in Theoretical Computer Science Conference, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2024, p. 62:1-62:25.
2024 | Published | Journal Article | IST-REx-ID: 15047 |

Intensification of daily tropical precipitation extremes from more organized convection
J. Bao, B. Stevens, L. Kluft, C.J. Muller, Science Advances 10 (2024).
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J. Bao, B. Stevens, L. Kluft, C.J. Muller, Science Advances 10 (2024).
2024 | Published | Thesis | IST-REx-ID: 15094 |

Persistence and Morse theory for discrete geometric structures
S. Cultrera di Montesano, Persistence and Morse Theory for Discrete Geometric Structures, Institute of Science and Technology Austria, 2024.
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S. Cultrera di Montesano, Persistence and Morse Theory for Discrete Geometric Structures, Institute of Science and Technology Austria, 2024.
2024 | Published | Journal Article | IST-REx-ID: 13182 |

Geometric characterization of the persistence of 1D maps
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Journal of Applied and Computational Topology 8 (2024) 1101–1119.
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R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Journal of Applied and Computational Topology 8 (2024) 1101–1119.
2024 | Published | Journal Article | IST-REx-ID: 15380 |

Depth in arrangements: Dehn–Sommerville–Euler relations with applications
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Journal of Applied and Computational Topology 8 (2024) 557–578.
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R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, M. Saghafian, Journal of Applied and Computational Topology 8 (2024) 557–578.
2024 | Published | Conference Paper | IST-REx-ID: 15093 |

Dynamically maintaining the persistent homology of time series
S. Cultrera di Montesano, H. Edelsbrunner, M. Henzinger, L. Ost, in:, D.P. Woodruff (Ed.), Proceedings of the 2024 Annual ACM-SIAM Symposium on Discrete Algorithms (SODA), Society for Industrial and Applied Mathematics, 2024, pp. 243–295.
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S. Cultrera di Montesano, H. Edelsbrunner, M. Henzinger, L. Ost, in:, D.P. Woodruff (Ed.), Proceedings of the 2024 Annual ACM-SIAM Symposium on Discrete Algorithms (SODA), Society for Industrial and Applied Mathematics, 2024, pp. 243–295.
2024 | Draft | Preprint | IST-REx-ID: 15091 |

Chromatic alpha complexes
S. Cultrera di Montesano, O. Draganov, H. Edelsbrunner, M. Saghafian, ArXiv (n.d.).
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S. Cultrera di Montesano, O. Draganov, H. Edelsbrunner, M. Saghafian, ArXiv (n.d.).
2024 | Published | Journal Article | IST-REx-ID: 17280 |

Monoallelic de novo AJAP1 loss-of- function variants disrupt trans-synaptic control of neurotransmitter release
Früh S, Boudkkazi S, Koppensteiner P, Sereikaite V, Chen LY, Fernandez-Fernandez D, Rem PD, Ulrich D, Schwenk J, Chen Z, Monnier EL, Fritzius T, Innocenti SM, Besseyrias V, Trovò L, Stawarski M, Argilli E, Sherr EH, Van Bon B, Kamsteeg EJ, Iascone M, Pilotta A, Cutrì MR, Azamian MS, Hernández-García A, Lalani SR, Rosenfeld JA, Zhao X, Vogel TP, Ona H, Scott DA, Scheiffele P, Strømgaard K, Tafti M, Gassmann M, Fakler B, Shigemoto R, Bettler B. 2024. Monoallelic de novo AJAP1 loss-of- function variants disrupt trans-synaptic control of neurotransmitter release. Science Advances. 10(28), adk5462.
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Früh S, Boudkkazi S, Koppensteiner P, Sereikaite V, Chen LY, Fernandez-Fernandez D, Rem PD, Ulrich D, Schwenk J, Chen Z, Monnier EL, Fritzius T, Innocenti SM, Besseyrias V, Trovò L, Stawarski M, Argilli E, Sherr EH, Van Bon B, Kamsteeg EJ, Iascone M, Pilotta A, Cutrì MR, Azamian MS, Hernández-García A, Lalani SR, Rosenfeld JA, Zhao X, Vogel TP, Ona H, Scott DA, Scheiffele P, Strømgaard K, Tafti M, Gassmann M, Fakler B, Shigemoto R, Bettler B. 2024. Monoallelic de novo AJAP1 loss-of- function variants disrupt trans-synaptic control of neurotransmitter release. Science Advances. 10(28), adk5462.
2024 | Published | Journal Article | IST-REx-ID: 15297 |

Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating
J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024).
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J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024).
2024 | Published | Journal Article | IST-REx-ID: 15258 |

Ten simple rules for pushing boundaries of inclusion at academic events
S.M. Hall, D. Kochin, C. Carne, P. Herterich, K.L. Lewers, M. Abdelhack, A. Ramasubramanian, J.F. Michael Alphonse, V. Ung, S. El-Gebali, C. Currin, E. Plomp, R. Thompson, M. Sharan, PLOS Computational Biology 20 (2024).
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S.M. Hall, D. Kochin, C. Carne, P. Herterich, K.L. Lewers, M. Abdelhack, A. Ramasubramanian, J.F. Michael Alphonse, V. Ung, S. El-Gebali, C. Currin, E. Plomp, R. Thompson, M. Sharan, PLOS Computational Biology 20 (2024).